RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 ATG5Q9H1Y0 275 aa7.42□□□□□ -1.22
RIF1-208ENST00000457745 OR51I2Q9H344 312 aa7.42□□□□□ -1.22
RIF1-208ENST00000457745 RBFOX1Q9NWB1 397 aaKnown RBP7.42□□□□□ -1.22
RIF1-208ENST00000457745 MTCH1Q9NZJ7 389 aa7.42□□□□□ -1.22
RIF1-208ENST00000457745 MRPL15Q9P015 296 aaKnown RBP7.42□□□□□ -1.22
RIF1-208ENST00000457745 EIF3KQ9UBQ5 218 aaKnown RBP7.42□□□□□ -1.22
RIF1-208ENST00000457745 FBLN5Q9UBX5 448 aa7.42□□□□□ -1.22
RIF1-208ENST00000457745 ZNF391Q9UJN7 358 aa7.42□□□□□ -1.22
RIF1-208ENST00000457745 MRPS7Q9Y2R9 242 aaKnown RBP7.42□□□□□ -1.22
RIF1-208ENST00000457745 PKDREJQ9NTG1 2253 aa7.41□□□□□ -1.22
RIF1-208ENST00000457745 IGLV3-9A0A075B6K5 115 aa7.41□□□□□ -1.22
RIF1-208ENST00000457745 TRAV18A0A075B6X5 111 aa7.41□□□□□ -1.22
RIF1-208ENST00000457745 A0A1B0GWJ7 208 aa7.41□□□□□ -1.22
RIF1-208ENST00000457745 A6NJY4 79 aa7.41□□□□□ -1.22
RIF1-208ENST00000457745 B8ZZF3 427 aa7.41□□□□□ -1.22
RIF1-208ENST00000457745 J3QW42 95 aa7.41□□□□□ -1.22
RIF1-208ENST00000457745 WNT9BO14905 357 aa7.41□□□□□ -1.22
RIF1-208ENST00000457745 TMEM225BP0DP42 221 aa7.41□□□□□ -1.22
RIF1-208ENST00000457745 ZNF250P15622 560 aa7.41□□□□□ -1.22
RIF1-208ENST00000457745 EGR1P18146 543 aa7.41□□□□□ -1.22
RIF1-208ENST00000457745 BTCP35070 178 aa7.41□□□□□ -1.22
RIF1-208ENST00000457745 ALDH3B1P43353 468 aa7.41□□□□□ -1.22
RIF1-208ENST00000457745 SNU13P55769 128 aaKnown RBP7.41□□□□□ -1.22
RIF1-208ENST00000457745 ZNF154Q13106 437 aa7.41□□□□□ -1.22
RIF1-208ENST00000457745 PDZK1IP1Q13113 114 aa7.41□□□□□ -1.22
RIF1-208ENST00000457745 CNN3Q15417 329 aaKnown RBP7.41□□□□□ -1.22
RIF1-208ENST00000457745 ADIPOQQ15848 244 aa7.41□□□□□ -1.22
RIF1-208ENST00000457745 CEACAM21Q3KPI0 293 aa7.41□□□□□ -1.22
RIF1-208ENST00000457745 ZNF260Q3ZCT1 412 aa7.41□□□□□ -1.22
RIF1-208ENST00000457745 RGS7BPQ6MZT1 257 aaPredicted RBP7.41□□□□□ -1.22
RIF1-208ENST00000457745 HAGHLQ6PII5 290 aaPredicted RBP7.41□□□□□ -1.22
RIF1-208ENST00000457745 XKRXQ6PP77 449 aa7.41□□□□□ -1.22
RIF1-208ENST00000457745 DNM1P46Q6ZS02 220 aa7.41□□□□□ -1.22
RIF1-208ENST00000457745 ZCCHC24Q8N2G6 241 aaKnown RBP7.41□□□□□ -1.22
RIF1-208ENST00000457745 ZNF611Q8N823 705 aa7.41□□□□□ -1.22
RIF1-208ENST00000457745 CSNK2A3Q8NEV1 391 aa7.41□□□□□ -1.22
RIF1-208ENST00000457745 OR8G5Q8NG78 346 aa7.41□□□□□ -1.22
RIF1-208ENST00000457745 OR5L1Q8NGL2 311 aa7.41□□□□□ -1.22
RIF1-208ENST00000457745 BORCS8Q96FH0 119 aa7.41□□□□□ -1.22
RIF1-208ENST00000457745 Q96M66 194 aa7.41□□□□□ -1.22
RIF1-208ENST00000457745 GPER1Q99527 375 aa7.41□□□□□ -1.22
RIF1-208ENST00000457745 ADAT1Q9BUB4 502 aaKnown RBP7.41□□□□□ -1.22
RIF1-208ENST00000457745 OR10A4Q9H209 315 aa7.41□□□□□ -1.22
RIF1-208ENST00000457745 POU2F3Q9UKI9 436 aa7.41□□□□□ -1.22
RIF1-208ENST00000457745 ARFGEF3Q5TH69 2177 aa7.41□□□□□ -1.22
RIF1-208ENST00000457745 SPTBN1Q01082 2364 aaKnown RBP7.41□□□□□ -1.22
RIF1-208ENST00000457745 ZNF462Q96JM2 2506 aa7.41□□□□□ -1.22
RIF1-208ENST00000457745 TMEM235A6NFC5 223 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 ANKRD30BLA7E2S9 258 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 TIMM8AO60220 97 aaPredicted RBP7.4□□□□□ -1.22
RIF1-208ENST00000457745 CRTAPO75718 401 aaPredicted RBP7.4□□□□□ -1.22
RIF1-208ENST00000457745 HTR3BO95264 441 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 CRYAAP02489 173 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 MGMTP16455 207 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 GNB3P16520 340 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 RAB6AP20340 208 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 PRKACBP22694 351 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 DUSP1P28562 367 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 GLRXP35754 106 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 MNDAP41218 407 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 RAD52P43351 418 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 HAAOP46952 286 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 PITPNBP48739 271 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 CEBPDP49716 269 aaPredicted RBP7.4□□□□□ -1.22
RIF1-208ENST00000457745 VEGFCP49767 419 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 RBP2P50120 134 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 PSMD7P51665 324 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 FUT6P51993 359 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 RPS27AP62979 156 aaKnown RBP7.4□□□□□ -1.22
RIF1-208ENST00000457745 MST1LQ2TV78 715 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 FAAP20Q6NZ36 180 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 C16orf87Q6PH81 154 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 LHFPL2Q6ZUX7 228 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 GDPD3Q7L5L3 318 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 OR2W3Q7Z3T1 314 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 CDH26Q8IXH8 852 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 OR8H2Q8N162 312 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 FBXL14Q8N1E6 418 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 FAM89BQ8N5H3 189 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 SCCPDHQ8NBX0 429 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 CA5BP1Q8WTZ4 195 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 NUDCD2Q8WVJ2 157 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 AQP3Q92482 292 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 MRPL24Q96A35 216 aaKnown RBP7.4□□□□□ -1.22
RIF1-208ENST00000457745 FOXRED1Q96CU9 486 aaPredicted RBP7.4□□□□□ -1.22
RIF1-208ENST00000457745 HDHD3Q9BSH5 251 aaPredicted RBP7.4□□□□□ -1.22
RIF1-208ENST00000457745 BCL2L14Q9BZR8 327 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 SELENOIQ9C0D9 397 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 C11orf54Q9H0W9 315 aaPredicted RBP7.4□□□□□ -1.22
RIF1-208ENST00000457745 OPA3Q9H6K4 179 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 NEK6Q9HC98 313 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 DUSP13Q9UII6 198 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 ATP23Q9Y6H3 246 aa7.4□□□□□ -1.22
RIF1-208ENST00000457745 RAI1Q7Z5J4 1906 aaPredicted RBP7.4□□□□□ -1.23
RIF1-208ENST00000457745 USP9XQ93008 2570 aaPredicted RBP7.39□□□□□ -1.23
RIF1-208ENST00000457745 ANKHD1Q8IWZ3 2542 aaKnown RBP7.39□□□□□ -1.23
RIF1-208ENST00000457745 IGKV1D-8A0A087WSZ0 117 aa7.39□□□□□ -1.23
RIF1-208ENST00000457745 A0A1B0GUH1 482 aa7.39□□□□□ -1.23
RIF1-208ENST00000457745 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.39□□□□□ -1.23
RIF1-208ENST00000457745 MFNGO00587 321 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms