RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 URM1Q9BTM9 101 aaKnown RBP8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 FKBP11Q9NYL4 201 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 DOCK9Q9BZ29 2069 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 A0A1W2PP11 408 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 FAM221AA4D161 298 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 CDC14CA4D256 554 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 ST8SIA3O43173 380 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 SMIM10L1P0DMW3 83 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 BCKDHBP21953 392 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 CCKARP32238 428 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 IL13RA2Q14627 380 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 RNF144BQ7Z419 303 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 SMIM10Q96HG1 83 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 ZNF2Q9BSG1 426 aaPredicted RBP8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 LPAR2Q9HBW0 351 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 DOCK8Q8NF50 2099 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 ZNF705FA8MVS1 300 aaPredicted RBP8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 CDC14BO60729 498 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 APBB3O95704 486 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 APODP05090 189 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 H2BFMP0C1H6 154 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 ZNF705DP0CH99 300 aaPredicted RBP8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 ZNF705BP0CI00 300 aaPredicted RBP8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 MMP9P14780 707 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 ZNF823P16415 610 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 TLE4Q04727 773 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 TMEM31Q5JXX7 168 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 LINC00346Q8IVM7 164 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 CLDND2Q8NHS1 167 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 STT3BQ8TCJ2 826 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 RBMXL1Q96E39 390 aaKnown RBP8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 SLC7A11Q9UPY5 501 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 LAMP3Q9UQV4 416 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 MRPS2Q9Y399 296 aaKnown RBP8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 WNT6Q9Y6F9 365 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 IGLON5A6NGN9 336 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 CA11O75493 328 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 SRSF10O75494 262 aaKnown RBP8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 FOSL2P15408 326 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 ELLP55199 621 aaPredicted RBP8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 EWSR1Q01844 656 aaKnown RBP eCLIP8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 SMAD4Q13485 552 aaKnown RBP8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 GNMTQ14749 295 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 PDGFRLQ15198 375 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 ACKR1Q16570 336 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 TMEM52BQ4KMG9 183 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 SPRED2Q7Z698 418 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 ZNF440Q8IYI8 595 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 TMEM37Q8WXS4 190 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 ZNF701Q9NV72 531 aaPredicted RBP8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 LRFN1Q9P244 771 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 FBLN5Q9UBX5 448 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 COA3Q9Y2R0 106 aaPredicted RBP8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 POLR3KQ9Y2Y1 108 aaPredicted RBP8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 LINC01553A4QN01 128 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 CRYM-AS1A6NIL9 109 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 EFEMP2O95967 443 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 OMGP23515 440 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 CD82P27701 267 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 SFTPDP35247 375 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 WDR25Q64LD2 544 aaPredicted RBP8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 LYZL2Q7Z4W2 148 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 ARHGEF39Q8N4T4 335 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 ACY3Q96HD9 319 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 VN1R1Q9GZP7 353 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 LYRM4Q9HD34 91 aa8.29□□□□□ -1.08
SYNPO2-204ENST00000448416 IGLV1-36A0A0B4J1U3 117 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 KIR2DL5BA0A0G2JN68 375 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 KIR2DL5BA0A0G2JPC4 375 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 BGLAPP02818 100 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 GLI4P10075 376 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 SELEP16581 610 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 FOXF1Q12946 379 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 LRP11Q86VZ4 500 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 KIR2DL5AQ8N109 375 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 NECAP1Q8NC96 275 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 GPER1Q99527 375 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 GNG13Q9P2W3 67 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 TET1Q8NFU7 2136 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 FAM24AA6NFZ4 105 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 HIDE1A8MVS5 230 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 PPP5D1E7EU14 171 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 HBE1P02100 147 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 CTSDP07339 412 aaPredicted RBP8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 ZNF20P17024 532 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 CTHP32929 405 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 TCEA2Q15560 299 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 CBLN3Q6UW01 205 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 C9orf40Q8IXQ3 194 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 OR52M1Q8NGK5 317 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 OR2A5Q96R48 311 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 S1PR5Q9H228 398 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 GPR84Q9NQS5 396 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 HRKO00198 91 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 CYR61O00622 381 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 HPRT1P00492 218 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 DBHP09172 617 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 ZNF43P17038 809 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 BRS3P32247 399 aa8.28□□□□□ -1.08
SYNPO2-204ENST00000448416 OR3A4PP47883 348 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms