RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 GMPPAQ96IJ6 420 aaPredicted RBP10.01□□□□□ -0.81
FN1-211ENST00000443816 OR5H8P0DN80 308 aa10.01□□□□□ -0.81
FN1-211ENST00000443816 RRASP10301 218 aa10.01□□□□□ -0.81
FN1-211ENST00000443816 KISS1Q15726 138 aa10.01□□□□□ -0.81
FN1-211ENST00000443816 ZNF485Q8NCK3 441 aa10.01□□□□□ -0.81
FN1-211ENST00000443816 EXTL1Q92935 676 aa10.01□□□□□ -0.81
FN1-211ENST00000443816 CMBLQ96DG6 245 aa10.01□□□□□ -0.81
FN1-211ENST00000443816 TMEM208Q9BTX3 173 aa10.01□□□□□ -0.81
FN1-211ENST00000443816 GREB1LQ9C091 1923 aaPredicted RBP10.01□□□□□ -0.81
FN1-211ENST00000443816 OR2W3Q7Z3T1 314 aa10.01□□□□□ -0.81
FN1-211ENST00000443816 OR8B4Q96RC9 309 aa10.01□□□□□ -0.81
FN1-211ENST00000443816 ISG20L2Q9H9L3 353 aaKnown RBP10.01□□□□□ -0.81
FN1-211ENST00000443816 PLEKHA2Q9HB19 425 aa10.01□□□□□ -0.81
FN1-211ENST00000443816 C3orf80F5H4A9 247 aa10.01□□□□□ -0.81
FN1-211ENST00000443816 IAPPP10997 89 aa10.01□□□□□ -0.81
FN1-211ENST00000443816 PTGFRP43088 359 aa10.01□□□□□ -0.81
FN1-211ENST00000443816 OR52N4Q8NGI2 321 aa10.01□□□□□ -0.81
FN1-211ENST00000443816 OR6S1Q8NH40 331 aa10.01□□□□□ -0.81
FN1-211ENST00000443816 PTP4A1Q93096 173 aa10.01□□□□□ -0.81
FN1-211ENST00000443816 KRBOX1C9JBD0 128 aa10.01□□□□□ -0.81
FN1-211ENST00000443816 IGFBP1P08833 259 aaPredicted RBP10.01□□□□□ -0.81
FN1-211ENST00000443816 STARD6P59095 220 aa10.01□□□□□ -0.81
FN1-211ENST00000443816 C1orf185Q5T7R7 199 aa10.01□□□□□ -0.81
FN1-211ENST00000443816 ZNF683Q8IZ20 524 aa10.01□□□□□ -0.81
FN1-211ENST00000443816 OR4F5Q8NH21 305 aa10.01□□□□□ -0.81
FN1-211ENST00000443816 OR4F4Q96R69 305 aa10.01□□□□□ -0.81
FN1-211ENST00000443816 MPC1Q9Y5U8 109 aa10.01□□□□□ -0.81
FN1-211ENST00000443816 RPS19P39019 145 aaKnown RBP10□□□□□ -0.81
FN1-211ENST00000443816 FAM162BQ5T6X4 162 aa10□□□□□ -0.81
FN1-211ENST00000443816 HIST2H3AQ71DI3 136 aa10□□□□□ -0.81
FN1-211ENST00000443816 MRGPREQ86SM8 312 aa10□□□□□ -0.81
FN1-211ENST00000443816 LRRC29Q8WV35 223 aa10□□□□□ -0.81
FN1-211ENST00000443816 SPNS1Q9H2V7 528 aa10□□□□□ -0.81
FN1-211ENST00000443816 MNX1P50219 401 aaPredicted RBP10□□□□□ -0.81
FN1-211ENST00000443816 HOXA4Q00056 320 aaPredicted RBP10□□□□□ -0.81
FN1-211ENST00000443816 SKP2Q13309 424 aa10□□□□□ -0.81
FN1-211ENST00000443816 PHYHD1Q5SRE7 291 aa10□□□□□ -0.81
FN1-211ENST00000443816 ALKAL2Q6UX46 152 aa10□□□□□ -0.81
FN1-211ENST00000443816 LIMS2Q7Z4I7 341 aa10□□□□□ -0.81
FN1-211ENST00000443816 ZNF547Q8IVP9 402 aa10□□□□□ -0.81
FN1-211ENST00000443816 OR52L2PQ8NGH6 319 aa10□□□□□ -0.81
FN1-211ENST00000443816 IL20Q9NYY1 176 aa10□□□□□ -0.81
FN1-211ENST00000443816 OR2F2O95006 317 aa10□□□□□ -0.81
FN1-211ENST00000443816 PRR35P0CG20 571 aa10□□□□□ -0.81
FN1-211ENST00000443816 OR2F1Q13607 317 aa10□□□□□ -0.81
FN1-211ENST00000443816 SPICQ8N5J4 248 aa10□□□□□ -0.81
FN1-211ENST00000443816 SLC7A6Q92536 515 aa10□□□□□ -0.81
FN1-211ENST00000443816 ADTRPQ96IZ2 230 aa10□□□□□ -0.81
FN1-211ENST00000443816 ATP5SQ99766 215 aa10□□□□□ -0.81
FN1-211ENST00000443816 ZNF835Q9Y2P0 537 aa10□□□□□ -0.81
FN1-211ENST00000443816 A0A1W2PQD3 144 aa10□□□□□ -0.81
FN1-211ENST00000443816 POM121CA8CG34 1229 aa10□□□□□ -0.81
FN1-211ENST00000443816 ACSM6Q6P461 480 aa10□□□□□ -0.81
FN1-211ENST00000443816 DUS3LQ96G46 650 aaKnown RBP10□□□□□ -0.81
FN1-211ENST00000443816 NTMQ9P121 344 aa10□□□□□ -0.81
FN1-211ENST00000443816 PHF3Q92576 2039 aaKnown RBP10□□□□□ -0.81
FN1-211ENST00000443816 TMEM182Q6ZP80 229 aaPredicted RBP10□□□□□ -0.81
FN1-211ENST00000443816 SLC35D1Q9NTN3 355 aa10□□□□□ -0.81
FN1-211ENST00000443816 COX7A1P24310 79 aa10□□□□□ -0.81
FN1-211ENST00000443816 BATFQ16520 125 aa10□□□□□ -0.81
FN1-211ENST00000443816 RNF165Q6ZSG1 346 aa10□□□□□ -0.81
FN1-211ENST00000443816 ASB10Q8WXI3 467 aa10□□□□□ -0.81
FN1-211ENST00000443816 FAM60AQ9NP50 221 aa10□□□□□ -0.81
FN1-211ENST00000443816 LSM2Q9Y333 95 aaKnown RBP10□□□□□ -0.81
FN1-211ENST00000443816 ZNF724A8MTY0 619 aa10□□□□□ -0.81
FN1-211ENST00000443816 IL5P05113 134 aa10□□□□□ -0.81
FN1-211ENST00000443816 DCAF10Q5QP82 559 aa10□□□□□ -0.81
FN1-211ENST00000443816 OR4F17Q8NGA8 305 aa10□□□□□ -0.81
FN1-211ENST00000443816 C10orf35Q96D05 121 aa10□□□□□ -0.81
FN1-211ENST00000443816 SLC17A5Q9NRA2 495 aa10□□□□□ -0.81
FN1-211ENST00000443816 ING1Q9UK53 422 aaPredicted RBP10□□□□□ -0.81
FN1-211ENST00000443816 PSMB6P28072 239 aa9.99□□□□□ -0.81
FN1-211ENST00000443816 ISL1P61371 349 aa9.99□□□□□ -0.81
FN1-211ENST00000443816 OR10V1Q8NGI7 309 aa9.99□□□□□ -0.81
FN1-211ENST00000443816 SIGLEC7Q9Y286 467 aa9.99□□□□□ -0.81
FN1-211ENST00000443816 GIPP09681 153 aaPredicted RBP9.99□□□□□ -0.81
FN1-211ENST00000443816 OR3A4PP47883 348 aa9.99□□□□□ -0.81
FN1-211ENST00000443816 ZFP36L2P47974 494 aaKnown RBP9.99□□□□□ -0.81
FN1-211ENST00000443816 INO80CQ6PI98 192 aaPredicted RBP9.99□□□□□ -0.81
FN1-211ENST00000443816 ACOT7LQ6ZUV0 252 aa9.99□□□□□ -0.81
FN1-211ENST00000443816 CALHM3Q86XJ0 350 aa9.99□□□□□ -0.81
FN1-211ENST00000443816 NYNRINQ9P2P1 1898 aaKnown RBP9.99□□□□□ -0.81
FN1-211ENST00000443816 PATE3B3GLJ2 98 aa9.99□□□□□ -0.81
FN1-211ENST00000443816 RER1O15258 196 aa9.99□□□□□ -0.81
FN1-211ENST00000443816 FHL5Q5TD97 284 aa9.99□□□□□ -0.81
FN1-211ENST00000443816 NUDT8Q8WV74 236 aa9.99□□□□□ -0.81
FN1-211ENST00000443816 C11orf54Q9H0W9 315 aaPredicted RBP9.99□□□□□ -0.81
FN1-211ENST00000443816 ZGRF1Q86YA3 2104 aa9.99□□□□□ -0.81
FN1-211ENST00000443816 LSM6P62312 80 aaKnown RBP9.99□□□□□ -0.81
FN1-211ENST00000443816 PAFAH1B2P68402 229 aa9.99□□□□□ -0.81
FN1-211ENST00000443816 GPR32P1Q8NGA4 272 aa9.99□□□□□ -0.81
FN1-211ENST00000443816 OR8U1Q8NH10 309 aa9.99□□□□□ -0.81
FN1-211ENST00000443816 SLC25A40Q8TBP6 338 aa9.99□□□□□ -0.81
FN1-211ENST00000443816 DYNLRB2Q8TF09 96 aa9.99□□□□□ -0.81
FN1-211ENST00000443816 A0A1B0GUH1 482 aa9.99□□□□□ -0.81
FN1-211ENST00000443816 OOEPA6NGQ2 149 aa9.99□□□□□ -0.81
FN1-211ENST00000443816 SLC31A2O15432 143 aa9.99□□□□□ -0.81
FN1-211ENST00000443816 ISXQ2M1V0 245 aa9.99□□□□□ -0.81
FN1-211ENST00000443816 TMEM229BQ8NBD8 167 aa9.99□□□□□ -0.81
FN1-211ENST00000443816 PTDSS2Q9BVG9 487 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms