RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 NCR1O76036 304 aa10.72□□□□□ -0.69
SCLT1-202ENST00000439369 FSTL3O95633 263 aa10.72□□□□□ -0.69
SCLT1-202ENST00000439369 F12P00748 615 aaPredicted RBP10.72□□□□□ -0.69
SCLT1-202ENST00000439369 CLEC2LP0C7M8 214 aa10.72□□□□□ -0.69
SCLT1-202ENST00000439369 TMEM225BP0DP42 221 aa10.72□□□□□ -0.69
SCLT1-202ENST00000439369 CALCBP10092 127 aa10.72□□□□□ -0.69
SCLT1-202ENST00000439369 ZNF182P17025 639 aaPredicted RBP10.72□□□□□ -0.69
SCLT1-202ENST00000439369 EFNA4P52798 201 aa10.72□□□□□ -0.69
SCLT1-202ENST00000439369 DMRTC1Q5HYR2 192 aa10.72□□□□□ -0.69
SCLT1-202ENST00000439369 PRAMEF6Q5VXH4 476 aa10.72□□□□□ -0.69
SCLT1-202ENST00000439369 ELP2Q6IA86 826 aa10.72□□□□□ -0.69
SCLT1-202ENST00000439369 WDR82Q6UXN9 313 aa10.72□□□□□ -0.69
SCLT1-202ENST00000439369 SLC25A26Q70HW3 274 aa10.72□□□□□ -0.69
SCLT1-202ENST00000439369 OR2W3Q7Z3T1 314 aa10.72□□□□□ -0.69
SCLT1-202ENST00000439369 ANGPTL5Q86XS5 388 aa10.72□□□□□ -0.69
SCLT1-202ENST00000439369 CALHM1Q8IU99 346 aa10.72□□□□□ -0.69
SCLT1-202ENST00000439369 C11orf53Q8IXP5 236 aa10.72□□□□□ -0.69
SCLT1-202ENST00000439369 C1orf87Q8N0U7 546 aa10.72□□□□□ -0.69
SCLT1-202ENST00000439369 ZCCHC24Q8N2G6 241 aaKnown RBP10.72□□□□□ -0.69
SCLT1-202ENST00000439369 POC1AQ8NBT0 407 aa10.72□□□□□ -0.69
SCLT1-202ENST00000439369 RDH5Q92781 318 aa10.72□□□□□ -0.69
SCLT1-202ENST00000439369 MRPS24Q96EL2 167 aaKnown RBP10.72□□□□□ -0.69
SCLT1-202ENST00000439369 SPACA5Q96QH8 159 aa10.72□□□□□ -0.69
SCLT1-202ENST00000439369 S100A13Q99584 98 aa10.72□□□□□ -0.69
SCLT1-202ENST00000439369 RASL12Q9NYN1 266 aa10.72□□□□□ -0.69
SCLT1-202ENST00000439369 ABRACLQ9P1F3 81 aa10.72□□□□□ -0.69
SCLT1-202ENST00000439369 ETV7Q9Y603 341 aa10.72□□□□□ -0.69
SCLT1-202ENST00000439369 A3GALT2U3KPV4 340 aa10.72□□□□□ -0.69
SCLT1-202ENST00000439369 GCN1Q92616 2671 aaKnown RBP10.72□□□□□ -0.69
SCLT1-202ENST00000439369 IGHV1-69-2A0A0G2JMI3 117 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 TRAPPC2LH3BP13 241 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 CDIPTO14735 213 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 KDM4BO94953 1096 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 PGA5P0DJD9 388 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 IRF2P14316 349 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 OR3A4PP47883 348 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 POU3F4P49335 361 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 ERVK11-1P61568 191 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 MPPED2Q15777 294 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 FAM189A2Q15884 450 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 DGUOKQ16854 277 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 AWAT2Q6E213 333 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 CDH24Q86UP0 819 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 MOGAT3Q86VF5 341 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 FAM90A1Q86YD7 464 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 OR4D6Q8NGJ1 314 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 OR51F2Q8NH61 342 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 KCNG3Q8TAE7 436 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 NINJ1Q92982 152 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 PTX4Q96A99 478 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 RFT1Q96AA3 541 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 MBD6Q96DN6 1003 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 CEP19Q96LK0 163 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 C1orf147Q96MC9 270 aaPredicted RBP10.71□□□□□ -0.69
SCLT1-202ENST00000439369 NRIP2Q9BQI9 281 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 BARHL1Q9BZE3 327 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 GSX2Q9BZM3 304 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 CST11Q9H112 138 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 METTL9Q9H1A3 318 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 SEBOXQ9HB31 216 aaPredicted RBP10.71□□□□□ -0.69
SCLT1-202ENST00000439369 SMURF1Q9HCE7 757 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 BEX4Q9NWD9 120 aaPredicted RBP10.71□□□□□ -0.69
SCLT1-202ENST00000439369 C1orf123Q9NWV4 160 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 RNF7Q9UBF6 113 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 DAPK2Q9UIK4 370 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 NPTNQ9Y639 398 aa10.71□□□□□ -0.69
SCLT1-202ENST00000439369 ARFGEF3Q5TH69 2177 aa10.7□□□□□ -0.7
SCLT1-202ENST00000439369 A0A075B6Q4 140 aa10.7□□□□□ -0.7
SCLT1-202ENST00000439369 SRRM5B3KS81 715 aa10.7□□□□□ -0.7
SCLT1-202ENST00000439369 SYNGR1O43759 233 aa10.7□□□□□ -0.7
SCLT1-202ENST00000439369 LHBP01229 141 aa10.7□□□□□ -0.7
SCLT1-202ENST00000439369 HPXP02790 462 aa10.7□□□□□ -0.7
SCLT1-202ENST00000439369 ARSBP15848 533 aa10.7□□□□□ -0.7
SCLT1-202ENST00000439369 RSU1Q15404 277 aa10.7□□□□□ -0.7
SCLT1-202ENST00000439369 HFEQ30201 348 aa10.7□□□□□ -0.7
SCLT1-202ENST00000439369 NHLRC3Q5JS37 347 aa10.7□□□□□ -0.7
SCLT1-202ENST00000439369 HES5Q5TA89 166 aa10.7□□□□□ -0.7
SCLT1-202ENST00000439369 MZT2AQ6P582 158 aa10.7□□□□□ -0.7
SCLT1-202ENST00000439369 GLIPR1L1Q6UWM5 242 aa10.7□□□□□ -0.7
SCLT1-202ENST00000439369 RNF144BQ7Z419 303 aa10.7□□□□□ -0.7
SCLT1-202ENST00000439369 OR5D18Q8NGL1 313 aa10.7□□□□□ -0.7
SCLT1-202ENST00000439369 FAM3DQ96BQ1 224 aa10.7□□□□□ -0.7
SCLT1-202ENST00000439369 CMTM3Q96MX0 182 aa10.7□□□□□ -0.7
SCLT1-202ENST00000439369 LIN7BQ9HAP6 207 aa10.7□□□□□ -0.7
SCLT1-202ENST00000439369 HES4Q9HCC6 221 aa10.7□□□□□ -0.7
SCLT1-202ENST00000439369 TMEM106BQ9NUM4 274 aa10.7□□□□□ -0.7
SCLT1-202ENST00000439369 UFSP2Q9NUQ7 469 aa10.7□□□□□ -0.7
SCLT1-202ENST00000439369 MTCH1Q9NZJ7 389 aa10.7□□□□□ -0.7
SCLT1-202ENST00000439369 ROS1P08922 2347 aa10.7□□□□□ -0.7
SCLT1-202ENST00000439369 FASNP49327 2511 aaKnown RBP10.69□□□□□ -0.7
SCLT1-202ENST00000439369 IGKV1-12A0A0C4DH73 117 aa10.69□□□□□ -0.7
SCLT1-202ENST00000439369 hCG_1807616A0A1W2PRN6 198 aa10.69□□□□□ -0.7
SCLT1-202ENST00000439369 SMIM30A4D0T7 59 aa10.69□□□□□ -0.7
SCLT1-202ENST00000439369 TMEM14DPA8MWL7 114 aa10.69□□□□□ -0.7
SCLT1-202ENST00000439369 H3BUI4 141 aa10.69□□□□□ -0.7
SCLT1-202ENST00000439369 LDLRAD4O15165 306 aa10.69□□□□□ -0.7
SCLT1-202ENST00000439369 SPRY1O43609 319 aaPredicted RBP10.69□□□□□ -0.7
SCLT1-202ENST00000439369 RP2O75695 350 aa10.69□□□□□ -0.7
SCLT1-202ENST00000439369 PLATP00750 562 aa10.69□□□□□ -0.7
SCLT1-202ENST00000439369 IGKV1D-12P01611 117 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms