RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 IGKV3-7A0A075B6H7 116 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 RPL7P18124 248 aaKnown RBP10.03□□□□□ -0.8
PTCH1-205ENST00000418258 GAMTQ14353 236 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 PNLIPRP3Q17RR3 467 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 ZNF485Q8NCK3 441 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 DYNC2LI1Q8TCX1 351 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 RXFP4Q8TDU9 374 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 AKAP6Q13023 2319 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 ARFGEF1Q9Y6D6 1849 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 CD1EP15812 388 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 G0S2P27469 103 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 EPHA8P29322 1005 aaPredicted RBP10.03□□□□□ -0.8
PTCH1-205ENST00000418258 KIR2DS2P43631 304 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 PAX5Q02548 391 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 JMJD6Q6NYC1 403 aaPredicted RBP10.03□□□□□ -0.8
PTCH1-205ENST00000418258 LILRB1Q8NHL6 650 aaPredicted RBP10.03□□□□□ -0.8
PTCH1-205ENST00000418258 LRRC29Q8WV35 223 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 SLC25A22Q9H936 323 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 TRAV38-1A0A0B4J264 116 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 SLC25A5P05141 298 aaKnown RBP10.03□□□□□ -0.8
PTCH1-205ENST00000418258 ZNF26P17031 533 aaPredicted RBP10.03□□□□□ -0.8
PTCH1-205ENST00000418258 MPGP29372 298 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 OXA1LQ15070 435 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 FAM162BQ5T6X4 162 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 TGIF2LXQ8IUE1 241 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 PLEKHA2Q9HB19 425 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 RER1O15258 196 aa10.02□□□□□ -0.8
PTCH1-205ENST00000418258 CRXO43186 299 aaPredicted RBP10.02□□□□□ -0.8
PTCH1-205ENST00000418258 CD80P33681 288 aa10.02□□□□□ -0.8
PTCH1-205ENST00000418258 BTG1P62324 171 aa10.02□□□□□ -0.8
PTCH1-205ENST00000418258 FFAR4Q5NUL3 377 aa10.02□□□□□ -0.8
PTCH1-205ENST00000418258 SYS1Q8N2H4 156 aa10.02□□□□□ -0.8
PTCH1-205ENST00000418258 TMED6Q8WW62 240 aa10.02□□□□□ -0.8
PTCH1-205ENST00000418258 ZNF831Q5JPB2 1677 aa10.02□□□□□ -0.8
PTCH1-205ENST00000418258 A0A1B0GVG6 124 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 ZNF32P17041 273 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 SPINK9Q5DT21 86 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 PABPC1L2AQ5JQF8 200 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 ZNF793Q6ZN11 406 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 C16orf47Q6ZP98 133 aaPredicted RBP10.02□□□□□ -0.81
PTCH1-205ENST00000418258 OR5M8Q8NGP6 311 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 SPSB1Q96BD6 273 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 OR2A5Q96R48 311 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 CABLES2Q9BTV7 478 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 SAP30LQ9HAJ7 183 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 KCNMB2Q9Y691 235 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 KCNE3Q9Y6H6 103 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 CHD5Q8TDI0 1954 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 CCL21O00585 134 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 LALBAP00709 142 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 ZNF117Q03924 483 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 KIAA0141Q14154 515 aaPredicted RBP10.02□□□□□ -0.81
PTCH1-205ENST00000418258 FA2HQ7L5A8 372 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 C20orf196Q8IYI0 205 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 C2orf50Q96LR7 162 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 CRISPLD2Q9H0B8 497 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 TMEM231Q9H6L2 316 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 FOXJ3Q9UPW0 622 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 YTHDF2Q9Y5A9 579 aaKnown RBP10.02□□□□□ -0.81
PTCH1-205ENST00000418258 KIAA1551Q9HCM1 1747 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 DOCK7Q96N67 2140 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 KISS1Q15726 138 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 RNF151Q2KHN1 245 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 Q3ZCU0 254 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 NCR3LG1Q68D85 454 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 LILRB4Q8NHJ6 448 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 OTOSQ8NHW6 89 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 CXXC4Q9H2H0 198 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 SLC25A19Q9HC21 320 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 ZNF586Q9NXT0 402 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 IGHV3-43A0A0B4J1X8 118 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 RFPL4AA6NLU0 287 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 RFPL4AL1F8VTS6 287 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 OPN1MWP04001 364 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 OPN1MW2P0DN77 364 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 OPN1MW3P0DN78 364 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 IGHV3-43DP0DP04 118 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 LYG2Q86SG7 212 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 MRGPRX3Q96LB0 322 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 OR2D2Q9H210 308 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 IL21Q9HBE4 155 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 PLEKHB1Q9UF11 243 aaPredicted RBP10.02□□□□□ -0.81
PTCH1-205ENST00000418258 ABCA3Q99758 1704 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 RGPD3A6NKT7 1758 aaPredicted RBP10.02□□□□□ -0.81
PTCH1-205ENST00000418258 CELA2BP08218 269 aaPredicted RBP10.02□□□□□ -0.81
PTCH1-205ENST00000418258 OR4A8P0C604 315 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 TPPP2P59282 170 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 SUMO1P63165 101 aaKnown RBP10.02□□□□□ -0.81
PTCH1-205ENST00000418258 TIPARPQ7Z3E1 657 aaKnown RBP10.02□□□□□ -0.81
PTCH1-205ENST00000418258 OR1B1Q8NGR6 318 aa10.02□□□□□ -0.81
PTCH1-205ENST00000418258 NEIL1Q96FI4 390 aaPredicted RBP10.02□□□□□ -0.81
PTCH1-205ENST00000418258 CST7O76096 145 aa10.01□□□□□ -0.81
PTCH1-205ENST00000418258 FMODQ06828 376 aa10.01□□□□□ -0.81
PTCH1-205ENST00000418258 TRAT1Q6PIZ9 186 aa10.01□□□□□ -0.81
PTCH1-205ENST00000418258 FAM122BQ7Z309 247 aa10.01□□□□□ -0.81
PTCH1-205ENST00000418258 NKX6-2Q9C056 277 aaPredicted RBP10.01□□□□□ -0.81
PTCH1-205ENST00000418258 LPAR2Q9HBW0 351 aa10.01□□□□□ -0.81
PTCH1-205ENST00000418258 C20orf141Q9NUB4 165 aa10.01□□□□□ -0.81
PTCH1-205ENST00000418258 INTS1Q8N201 2190 aaKnown RBP10.01□□□□□ -0.81
PTCH1-205ENST00000418258 FAM186AA6NE01 2351 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms