RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 MRPL3P09001 348 aaKnown RBP12.02□□□□□ -0.49
RPS28-201ENST00000417088 PRDX2P32119 198 aa12.02□□□□□ -0.49
RPS28-201ENST00000417088 CEBPDP49716 269 aaPredicted RBP12.02□□□□□ -0.49
RPS28-201ENST00000417088 BMXP51813 675 aa12.02□□□□□ -0.49
RPS28-201ENST00000417088 RPL31P62899 125 aaKnown RBP12.02□□□□□ -0.49
RPS28-201ENST00000417088 SMIM21Q3B7S5 101 aa12.02□□□□□ -0.49
RPS28-201ENST00000417088 KPRPQ5T749 579 aaPredicted RBP12.02□□□□□ -0.49
RPS28-201ENST00000417088 ZBTB37Q5TC79 503 aa12.02□□□□□ -0.49
RPS28-201ENST00000417088 SAMD5Q5TGI4 173 aa12.02□□□□□ -0.49
RPS28-201ENST00000417088 ZNF561Q8N587 486 aa12.02□□□□□ -0.49
RPS28-201ENST00000417088 OR8B4Q96RC9 309 aa12.02□□□□□ -0.49
RPS28-201ENST00000417088 ZNF556Q9HAH1 456 aa12.02□□□□□ -0.49
RPS28-201ENST00000417088 RAB18Q9NP72 206 aa12.02□□□□□ -0.49
RPS28-201ENST00000417088 ENPP5Q9UJA9 477 aa12.02□□□□□ -0.49
RPS28-201ENST00000417088 COPS3Q9UNS2 423 aa12.02□□□□□ -0.49
RPS28-201ENST00000417088 PIGLQ9Y2B2 252 aa12.02□□□□□ -0.49
RPS28-201ENST00000417088 PLXNB1O43157 2135 aa12.01□□□□□ -0.49
RPS28-201ENST00000417088 A0A1W2PPH5 198 aa12.01□□□□□ -0.49
RPS28-201ENST00000417088 J3QT63 122 aa12.01□□□□□ -0.49
RPS28-201ENST00000417088 SLC1A7O00341 560 aa12.01□□□□□ -0.49
RPS28-201ENST00000417088 CHST1O43916 411 aa12.01□□□□□ -0.49
RPS28-201ENST00000417088 NOS1APO75052 506 aaPredicted RBP12.01□□□□□ -0.49
RPS28-201ENST00000417088 ZNF254O75437 659 aa12.01□□□□□ -0.49
RPS28-201ENST00000417088 NRASP01111 189 aa12.01□□□□□ -0.49
RPS28-201ENST00000417088 TTRP02766 147 aa12.01□□□□□ -0.49
RPS28-201ENST00000417088 PGA5P0DJD9 388 aa12.01□□□□□ -0.49
RPS28-201ENST00000417088 CCL3L1P16619 93 aa12.01□□□□□ -0.49
RPS28-201ENST00000417088 CALB2P22676 271 aa12.01□□□□□ -0.49
RPS28-201ENST00000417088 COX7A1P24310 79 aa12.01□□□□□ -0.49
RPS28-201ENST00000417088 HAAOP46952 286 aa12.01□□□□□ -0.49
RPS28-201ENST00000417088 MFGE8Q08431 387 aaPredicted RBP12.01□□□□□ -0.49
RPS28-201ENST00000417088 FBLN7Q53RD9 439 aa12.01□□□□□ -0.49
RPS28-201ENST00000417088 ZNF684Q5T5D7 378 aa12.01□□□□□ -0.49
RPS28-201ENST00000417088 ZNF679Q8IYX0 411 aa12.01□□□□□ -0.49
RPS28-201ENST00000417088 OR4M1Q8NGD0 313 aa12.01□□□□□ -0.49
RPS28-201ENST00000417088 TTTY10Q9BZA0 68 aa12.01□□□□□ -0.49
RPS28-201ENST00000417088 NPFFR1Q9GZQ6 430 aa12.01□□□□□ -0.49
RPS28-201ENST00000417088 TVP23BQ9NYZ1 205 aa12.01□□□□□ -0.49
RPS28-201ENST00000417088 NUFIP1Q9UHK0 495 aaKnown RBP12.01□□□□□ -0.49
RPS28-201ENST00000417088 FAM90A8PA6NJQ4 464 aa12□□□□□ -0.49
RPS28-201ENST00000417088 AQP12BA6NM10 295 aa12□□□□□ -0.49
RPS28-201ENST00000417088 E2F6O75461 281 aa12□□□□□ -0.49
RPS28-201ENST00000417088 DHRS3O75911 302 aa12□□□□□ -0.49
RPS28-201ENST00000417088 ANXA8P13928 327 aa12□□□□□ -0.49
RPS28-201ENST00000417088 RIDAP52758 137 aaKnown RBP12□□□□□ -0.49
RPS28-201ENST00000417088 LGALS4P56470 323 aa12□□□□□ -0.49
RPS28-201ENST00000417088 ZNF273Q14593 569 aa12□□□□□ -0.49
RPS28-201ENST00000417088 SNAPC1Q16533 368 aa12□□□□□ -0.49
RPS28-201ENST00000417088 ZNF829Q3KNS6 432 aaPredicted RBP12□□□□□ -0.49
RPS28-201ENST00000417088 LIAT1Q6ZQX7 453 aa12□□□□□ -0.49
RPS28-201ENST00000417088 LHFPL4Q7Z7J7 247 aa12□□□□□ -0.49
RPS28-201ENST00000417088 ZNF573Q86YE8 665 aa12□□□□□ -0.49
RPS28-201ENST00000417088 AQP12AQ8IXF9 295 aa12□□□□□ -0.49
RPS28-201ENST00000417088 OR2T27Q8NH04 317 aa12□□□□□ -0.49
RPS28-201ENST00000417088 ASB17Q8WXJ9 295 aa12□□□□□ -0.49
RPS28-201ENST00000417088 NKX3-1Q99801 234 aaPredicted RBP12□□□□□ -0.49
RPS28-201ENST00000417088 NRIP2Q9BQI9 281 aa12□□□□□ -0.49
RPS28-201ENST00000417088 TEX12Q9BXU0 123 aa12□□□□□ -0.49
RPS28-201ENST00000417088 C1orf21Q9H246 121 aa12□□□□□ -0.49
RPS28-201ENST00000417088 USE1Q9NZ43 259 aa12□□□□□ -0.49
RPS28-201ENST00000417088 TMEM14AQ9Y6G1 99 aa12□□□□□ -0.49
RPS28-201ENST00000417088 hCG_1809904A0A1W2PP81 198 aa11.99□□□□□ -0.49
RPS28-201ENST00000417088 A0A1W2PPE2 198 aa11.99□□□□□ -0.49
RPS28-201ENST00000417088 A0A1W2PR64 198 aa11.99□□□□□ -0.49
RPS28-201ENST00000417088 A0A1W2PRV1 198 aa11.99□□□□□ -0.49
RPS28-201ENST00000417088 PQLC2LA1A4F0 135 aa11.99□□□□□ -0.49
RPS28-201ENST00000417088 SRSF10O75494 262 aaKnown RBP11.99□□□□□ -0.49
RPS28-201ENST00000417088 NXPH2O95156 264 aa11.99□□□□□ -0.49
RPS28-201ENST00000417088 PRB2P02812 416 aaPredicted RBP11.99□□□□□ -0.49
RPS28-201ENST00000417088 TK1P04183 234 aa11.99□□□□□ -0.49
RPS28-201ENST00000417088 VSIG10L2P0DP72 767 aa11.99□□□□□ -0.49
RPS28-201ENST00000417088 CLVS2Q5SYC1 327 aa11.99□□□□□ -0.49
RPS28-201ENST00000417088 LCN1P1Q5VSP4 162 aa11.99□□□□□ -0.49
RPS28-201ENST00000417088 TMEM42Q69YG0 159 aa11.99□□□□□ -0.49
RPS28-201ENST00000417088 ZNF782Q6ZMW2 699 aaPredicted RBP11.99□□□□□ -0.49
RPS28-201ENST00000417088 LYG1Q8N1E2 194 aa11.99□□□□□ -0.49
RPS28-201ENST00000417088 BATF2Q8N1L9 274 aa11.99□□□□□ -0.49
RPS28-201ENST00000417088 DYNAPQ8N1N2 210 aa11.99□□□□□ -0.49
RPS28-201ENST00000417088 DTX3Q8N9I9 347 aa11.99□□□□□ -0.49
RPS28-201ENST00000417088 THTPAQ9BU02 230 aa11.99□□□□□ -0.49
RPS28-201ENST00000417088 ZNF702PQ9H963 129 aa11.99□□□□□ -0.49
RPS28-201ENST00000417088 HES4Q9HCC6 221 aa11.99□□□□□ -0.49
RPS28-201ENST00000417088 GPR173Q9NS66 373 aa11.99□□□□□ -0.49
RPS28-201ENST00000417088 IKZF2Q9UKS7 526 aa11.99□□□□□ -0.49
RPS28-201ENST00000417088 POLDIP2Q9Y2S7 368 aa11.99□□□□□ -0.49
RPS28-201ENST00000417088 V9GYS6 101 aa11.99□□□□□ -0.49
RPS28-201ENST00000417088 A0A1B0GTI1 187 aa11.98□□□□□ -0.49
RPS28-201ENST00000417088 C17orf98A8MV24 154 aa11.98□□□□□ -0.49
RPS28-201ENST00000417088 VGLL3A8MV65 326 aa11.98□□□□□ -0.49
RPS28-201ENST00000417088 DLGAP1O14490 977 aa11.98□□□□□ -0.49
RPS28-201ENST00000417088 MAGEB4O15481 346 aaPredicted RBP11.98□□□□□ -0.49
RPS28-201ENST00000417088 PIPP12273 146 aaPredicted RBP11.98□□□□□ -0.49
RPS28-201ENST00000417088 HOXB6P17509 224 aaKnown RBP11.98□□□□□ -0.49
RPS28-201ENST00000417088 MPZP25189 248 aa11.98□□□□□ -0.49
RPS28-201ENST00000417088 RAB13P51153 203 aa11.98□□□□□ -0.49
RPS28-201ENST00000417088 CRISP1P54107 249 aa11.98□□□□□ -0.49
RPS28-201ENST00000417088 DLX6P56179 175 aa11.98□□□□□ -0.49
RPS28-201ENST00000417088 ERVK11-1P61568 191 aa11.98□□□□□ -0.49
RPS28-201ENST00000417088 HABP2Q14520 560 aaPredicted RBP11.98□□□□□ -0.49
RPS28-201ENST00000417088 CCBE1Q6UXH8 406 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms