RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 SIRPDQ9H106 197 aa10.65□□□□□ -0.7
LINC00339-202ENST00000416769 TUBG2Q9NRH3 451 aa10.65□□□□□ -0.7
LINC00339-202ENST00000416769 FAM206AQ9NX38 181 aa10.65□□□□□ -0.7
LINC00339-202ENST00000416769 R4GMQ9 66 aa10.65□□□□□ -0.7
LINC00339-202ENST00000416769 IGHV3OR15-7A0A075B7D8 119 aa10.64□□□□□ -0.71
LINC00339-202ENST00000416769 A0A1B0GWJ7 208 aa10.64□□□□□ -0.71
LINC00339-202ENST00000416769 ZNF879B4DU55 563 aa10.64□□□□□ -0.71
LINC00339-202ENST00000416769 ENSAO43768 121 aaKnown RBP10.64□□□□□ -0.71
LINC00339-202ENST00000416769 TOX4O94842 621 aa10.64□□□□□ -0.71
LINC00339-202ENST00000416769 RPP14O95059 124 aaKnown RBP10.64□□□□□ -0.71
LINC00339-202ENST00000416769 LCATP04180 440 aa10.64□□□□□ -0.71
LINC00339-202ENST00000416769 TGM4P49221 684 aa10.64□□□□□ -0.71
LINC00339-202ENST00000416769 CCR9P51686 369 aa10.64□□□□□ -0.71
LINC00339-202ENST00000416769 ZNF121P58317 390 aaPredicted RBP10.64□□□□□ -0.71
LINC00339-202ENST00000416769 PSMA6P60900 246 aaKnown RBP10.64□□□□□ -0.71
LINC00339-202ENST00000416769 SPHARQ15513 63 aa10.64□□□□□ -0.71
LINC00339-202ENST00000416769 TBCEQ15813 527 aaPredicted RBP10.64□□□□□ -0.71
LINC00339-202ENST00000416769 ZNF181Q2M3W8 571 aa10.64□□□□□ -0.71
LINC00339-202ENST00000416769 OR5L1Q8NGL2 311 aa10.64□□□□□ -0.71
LINC00339-202ENST00000416769 RNF166Q96A37 237 aaPredicted RBP10.64□□□□□ -0.71
LINC00339-202ENST00000416769 COG8Q96MW5 612 aa10.64□□□□□ -0.71
LINC00339-202ENST00000416769 WDFY2Q96P53 400 aa10.64□□□□□ -0.71
LINC00339-202ENST00000416769 ISYNA1Q9NPH2 558 aa10.64□□□□□ -0.71
LINC00339-202ENST00000416769 NOX4Q9NPH5 578 aa10.64□□□□□ -0.71
LINC00339-202ENST00000416769 ACOT13Q9NPJ3 140 aa10.64□□□□□ -0.71
LINC00339-202ENST00000416769 TMEM100Q9NV29 134 aa10.64□□□□□ -0.71
LINC00339-202ENST00000416769 DNAJB11Q9UBS4 358 aa10.64□□□□□ -0.71
LINC00339-202ENST00000416769 LSM2Q9Y333 95 aaKnown RBP10.64□□□□□ -0.71
LINC00339-202ENST00000416769 IGHV1-69DA0A0B4J2H0 117 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 A0A1B0GUS0 222 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 TRIM64CA6NLI5 447 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 LRRC30A6NM36 301 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 LOC110117498-PIK3R3F6TDL0 507 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 G3V4G9 280 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 IFNL4K9M1U5 179 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 OGG1O15527 345 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 CLPXO76031 633 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 IGHV1-69P01742 117 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 GYPAP02724 150 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 ANXA2P07355 339 aaKnown RBP10.63□□□□□ -0.71
LINC00339-202ENST00000416769 CA6P23280 308 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 GATA4P43694 442 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 MAP2K4P45985 399 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 TAS2R43P59537 309 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 ARF6P62330 175 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 BDH1Q02338 343 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 ALKBH1Q13686 389 aaKnown RBP10.63□□□□□ -0.71
LINC00339-202ENST00000416769 TAF9Q16594 264 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 RPL22L1Q6P5R6 122 aaKnown RBP10.63□□□□□ -0.71
LINC00339-202ENST00000416769 CATSPERDQ86XM0 798 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 ELMOD2Q8IZ81 293 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 PNKDQ8N490 385 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 OR52H1Q8NGJ2 320 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 Q8TCH9 128 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 SEH1LQ96EE3 360 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 PGAM5Q96HS1 289 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 OR5M11Q96RB7 305 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 PBOV1Q9GZY1 135 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 OR10A2Q9H208 303 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 MOB1AQ9H8S9 216 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 TRIM36Q9NQ86 728 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 ACOXLQ9NUZ1 547 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 FRRS1LQ9P0K9 344 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 NUFIP1Q9UHK0 495 aaKnown RBP10.63□□□□□ -0.71
LINC00339-202ENST00000416769 OR52A1Q9UKL2 312 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 PLXNB1O43157 2135 aa10.63□□□□□ -0.71
LINC00339-202ENST00000416769 A0A1W2PRD5 423 aa10.62□□□□□ -0.71
LINC00339-202ENST00000416769 A0A1W2PRF3 423 aa10.62□□□□□ -0.71
LINC00339-202ENST00000416769 A0A1W2PRM7 423 aa10.62□□□□□ -0.71
LINC00339-202ENST00000416769 E9PI62 339 aa10.62□□□□□ -0.71
LINC00339-202ENST00000416769 P2RY10O00398 339 aa10.62□□□□□ -0.71
LINC00339-202ENST00000416769 TIMM23O14925 209 aa10.62□□□□□ -0.71
LINC00339-202ENST00000416769 ADAM20O43506 726 aa10.62□□□□□ -0.71
LINC00339-202ENST00000416769 CD1AP06126 327 aa10.62□□□□□ -0.71
LINC00339-202ENST00000416769 RPSAP08865 295 aaKnown RBP10.62□□□□□ -0.71
LINC00339-202ENST00000416769 SLC2A1P11166 492 aa10.62□□□□□ -0.71
LINC00339-202ENST00000416769 CD200P41217 278 aa10.62□□□□□ -0.71
LINC00339-202ENST00000416769 IER3P46695 156 aa10.62□□□□□ -0.71
LINC00339-202ENST00000416769 GPR50Q13585 617 aa10.62□□□□□ -0.71
LINC00339-202ENST00000416769 MED22Q15528 200 aa10.62□□□□□ -0.71
LINC00339-202ENST00000416769 SNAI3Q3KNW1 292 aa10.62□□□□□ -0.71
LINC00339-202ENST00000416769 UBE2UQ5VVX9 321 aa10.62□□□□□ -0.71
LINC00339-202ENST00000416769 FAM57BQ71RH2 274 aa10.62□□□□□ -0.71
LINC00339-202ENST00000416769 C1orf87Q8N0U7 546 aa10.62□□□□□ -0.71
LINC00339-202ENST00000416769 TMEM86BQ8N661 226 aa10.62□□□□□ -0.71
LINC00339-202ENST00000416769 OR2G2Q8NGZ5 317 aa10.62□□□□□ -0.71
LINC00339-202ENST00000416769 OR2AE1Q8NHA4 323 aa10.62□□□□□ -0.71
LINC00339-202ENST00000416769 SSMEM1Q8WWF3 244 aa10.62□□□□□ -0.71
LINC00339-202ENST00000416769 FCGR1BQ92637 280 aa10.62□□□□□ -0.71
LINC00339-202ENST00000416769 ITFG2Q969R8 447 aa10.62□□□□□ -0.71
LINC00339-202ENST00000416769 PPP1R14AQ96A00 147 aa10.62□□□□□ -0.71
LINC00339-202ENST00000416769 SGK3Q96BR1 496 aa10.62□□□□□ -0.71
LINC00339-202ENST00000416769 FAM71F1Q96KD3 344 aaPredicted RBP10.62□□□□□ -0.71
LINC00339-202ENST00000416769 PPP1R3EQ9H7J1 279 aa10.62□□□□□ -0.71
LINC00339-202ENST00000416769 TCF7L1Q9HCS4 588 aa10.62□□□□□ -0.71
LINC00339-202ENST00000416769 BRD7Q9NPI1 651 aa10.62□□□□□ -0.71
LINC00339-202ENST00000416769 ZNF319Q9P2F9 582 aa10.62□□□□□ -0.71
LINC00339-202ENST00000416769 ZNF391Q9UJN7 358 aa10.62□□□□□ -0.71
LINC00339-202ENST00000416769 SIGLEC9Q9Y336 463 aa10.62□□□□□ -0.71
LINC00339-202ENST00000416769 N6AMT1Q9Y5N5 214 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms