RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 TCTE3Q8IZS6 198 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 MARCH1Q8TCQ1 289 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 POM121Q96HA1 1249 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 RBM38Q9H0Z9 239 aaKnown RBP10.57□□□□□ -0.72
PTPRF-205ENST00000414879 SLC25A32Q9H2D1 315 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 RPS10-NUDT3A0A1W2PQS6 291 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 OR5H14A6NHG9 310 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 ZNF724A8MTY0 619 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 C16orf97H3BN30 126 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 SPRY3O43610 288 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 COX5BP10606 129 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 COX6A1P12074 109 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 FAM27D1Q5T7N8 215 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 FOXB2Q5VYV0 432 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 GLDNQ6ZMI3 551 aaPredicted RBP10.57□□□□□ -0.72
PTPRF-205ENST00000414879 OR4S1Q8NGB4 309 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 SPSB2Q99619 263 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 TAF9BQ9HBM6 251 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 RAB18Q9NP72 206 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 SPRY1O43609 319 aaPredicted RBP10.57□□□□□ -0.72
PTPRF-205ENST00000414879 CYTIPO60759 359 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 EDN3P14138 238 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 CSRP1P21291 193 aaKnown RBP10.57□□□□□ -0.72
PTPRF-205ENST00000414879 CA6P23280 308 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 SSTR2P30874 369 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 AGFG1P52594 562 aaKnown RBP10.57□□□□□ -0.72
PTPRF-205ENST00000414879 HTD2P86397 168 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 PCOLCEQ15113 449 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 C1QL3Q5VWW1 255 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 OR10K2Q6IF99 312 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 BTLAQ7Z6A9 289 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 FAM213BQ8TBF2 198 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 NTNG2Q96CW9 530 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 HRH4Q9H3N8 390 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 THSD7BQ9C0I4 1608 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 DHRS7CA6NNS2 312 aa10.56□□□□□ -0.72
PTPRF-205ENST00000414879 LYZL6O75951 148 aa10.56□□□□□ -0.72
PTPRF-205ENST00000414879 SELENOPP49908 381 aa10.56□□□□□ -0.72
PTPRF-205ENST00000414879 POU4F3Q15319 338 aa10.56□□□□□ -0.72
PTPRF-205ENST00000414879 C17orf50Q8WW18 174 aa10.56□□□□□ -0.72
PTPRF-205ENST00000414879 MAP6Q96JE9 813 aa10.56□□□□□ -0.72
PTPRF-205ENST00000414879 CHST5Q9GZS9 411 aa10.56□□□□□ -0.72
PTPRF-205ENST00000414879 ATG2BQ96BY7 2078 aa10.56□□□□□ -0.72
PTPRF-205ENST00000414879 PRRX1P54821 245 aa10.56□□□□□ -0.72
PTPRF-205ENST00000414879 ROM1Q03395 351 aa10.56□□□□□ -0.72
PTPRF-205ENST00000414879 OR52W1Q6IF63 320 aa10.56□□□□□ -0.72
PTPRF-205ENST00000414879 FAM214BQ7L5A3 538 aa10.56□□□□□ -0.72
PTPRF-205ENST00000414879 CADM3Q8N126 398 aa10.56□□□□□ -0.72
PTPRF-205ENST00000414879 LILRB4Q8NHJ6 448 aa10.56□□□□□ -0.72
PTPRF-205ENST00000414879 NEIL1Q96FI4 390 aaPredicted RBP10.56□□□□□ -0.72
PTPRF-205ENST00000414879 GSX2Q9BZM3 304 aa10.56□□□□□ -0.72
PTPRF-205ENST00000414879 ZNF355PQ9NSJ1 428 aa10.56□□□□□ -0.72
PTPRF-205ENST00000414879 COPS3Q9UNS2 423 aa10.56□□□□□ -0.72
PTPRF-205ENST00000414879 FAM96BQ9Y3D0 163 aa10.56□□□□□ -0.72
PTPRF-205ENST00000414879 SDCBPO00560 298 aaPredicted RBP10.56□□□□□ -0.72
PTPRF-205ENST00000414879 FSTP19883 344 aa10.56□□□□□ -0.72
PTPRF-205ENST00000414879 PTAFRP25105 342 aa10.56□□□□□ -0.72
PTPRF-205ENST00000414879 C10orf111Q8N326 155 aa10.56□□□□□ -0.72
PTPRF-205ENST00000414879 PPP1R3CQ9UQK1 317 aa10.56□□□□□ -0.72
PTPRF-205ENST00000414879 CSAG2Q9Y5P2 127 aa10.56□□□□□ -0.72
PTPRF-205ENST00000414879 A0A0A6YYJ9 748 aa10.56□□□□□ -0.72
PTPRF-205ENST00000414879 SULT1A3P0DMM9 295 aa10.56□□□□□ -0.72
PTPRF-205ENST00000414879 SULT1A4P0DMN0 295 aa10.56□□□□□ -0.72
PTPRF-205ENST00000414879 MAP1BP46821 2468 aaKnown RBP10.56□□□□□ -0.72
PTPRF-205ENST00000414879 TMEM251Q8N6I4 163 aa10.56□□□□□ -0.72
PTPRF-205ENST00000414879 CABIN1Q9Y6J0 2220 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 A0A0J9YW62 118 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 GZMHP20718 246 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 RPS16P62249 146 aaKnown RBP10.55□□□□□ -0.72
PTPRF-205ENST00000414879 FAM219BQ5XKK7 198 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 SPICQ8N5J4 248 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 ZBTB34Q8NCN2 500 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 OR5AP2Q8NGF4 316 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 TMEM56Q96MV1 263 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 ARV1Q9H2C2 271 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 FRRS1LQ9P0K9 344 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 TEX51A0A1B0GUA7 166 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 ANGPTL7O43827 346 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 SOX15O60248 233 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 IGHMP01871 453 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 RPL12P30050 165 aaKnown RBP10.55□□□□□ -0.72
PTPRF-205ENST00000414879 BPIFB3P59826 476 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 SPATA46Q5T0L3 261 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 DGAT2L6Q6ZPD8 337 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 OR5H6Q8NGV6 325 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 LRRC29Q8WV35 223 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 MARC2Q969Z3 335 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 POM121L2Q96KW2 1035 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 MGAT2Q10469 447 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 ACOT6Q3I5F7 207 aaPredicted RBP10.55□□□□□ -0.72
PTPRF-205ENST00000414879 SOHLH1Q5JUK2 328 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 SMIM15Q7Z3B0 74 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 DHRS9Q9BPW9 319 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 CNTD2Q9H8S5 307 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 IGKV3D-11A0A0A0MRZ8 115 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 FUT5Q11128 374 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 CLINT1Q14677 625 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 BAK1Q16611 211 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 BEX5Q5H9J7 111 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 SFTPA2Q8IWL1 248 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms