RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 ACOD1A6NK06 481 aa13.5□□□□□ -0.25
MRPL55-220ENST00000411464 SNX3O60493 162 aa13.5□□□□□ -0.25
MRPL55-220ENST00000411464 ARG1P05089 322 aa13.5□□□□□ -0.25
MRPL55-220ENST00000411464 ATP6V1B1P15313 513 aa13.5□□□□□ -0.25
MRPL55-220ENST00000411464 CD33P20138 364 aa13.5□□□□□ -0.25
MRPL55-220ENST00000411464 FOXB2Q5VYV0 432 aa13.5□□□□□ -0.25
MRPL55-220ENST00000411464 PLCXD3Q63HM9 321 aa13.5□□□□□ -0.25
MRPL55-220ENST00000411464 CCBE1Q6UXH8 406 aaPredicted RBP13.5□□□□□ -0.25
MRPL55-220ENST00000411464 TMEM219Q86XT9 240 aa13.5□□□□□ -0.25
MRPL55-220ENST00000411464 CALHM1Q8IU99 346 aa13.5□□□□□ -0.25
MRPL55-220ENST00000411464 POC1AQ8NBT0 407 aa13.5□□□□□ -0.25
MRPL55-220ENST00000411464 OR10G2Q8NGC3 310 aa13.5□□□□□ -0.25
MRPL55-220ENST00000411464 FOXRED1Q96CU9 486 aaPredicted RBP13.5□□□□□ -0.25
MRPL55-220ENST00000411464 MALSU1Q96EH3 234 aa13.5□□□□□ -0.25
MRPL55-220ENST00000411464 NIPSNAP1Q9BPW8 284 aa13.5□□□□□ -0.25
MRPL55-220ENST00000411464 MAGIXQ9H6Y5 334 aa13.5□□□□□ -0.25
MRPL55-220ENST00000411464 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.5□□□□□ -0.25
MRPL55-220ENST00000411464 TAGLN3Q9UI15 199 aa13.5□□□□□ -0.25
MRPL55-220ENST00000411464 LAMP5Q9UJQ1 280 aa13.5□□□□□ -0.25
MRPL55-220ENST00000411464 PLXNB1O43157 2135 aa13.49□□□□□ -0.25
MRPL55-220ENST00000411464 TMEM269A0A1B0GVZ9 245 aa13.49□□□□□ -0.25
MRPL55-220ENST00000411464 A6NDX4 124 aa13.49□□□□□ -0.25
MRPL55-220ENST00000411464 NXPH2O95156 264 aa13.49□□□□□ -0.25
MRPL55-220ENST00000411464 FAM107AO95990 144 aa13.49□□□□□ -0.25
MRPL55-220ENST00000411464 ATP6V1B2P21281 511 aa13.49□□□□□ -0.25
MRPL55-220ENST00000411464 SSX2Q16385 188 aa13.49□□□□□ -0.25
MRPL55-220ENST00000411464 FAM98BQ52LJ0 330 aaKnown RBP13.49□□□□□ -0.25
MRPL55-220ENST00000411464 VAX1Q5SQQ9 334 aa13.49□□□□□ -0.25
MRPL55-220ENST00000411464 PIGWQ7Z7B1 504 aa13.49□□□□□ -0.25
MRPL55-220ENST00000411464 ZNF573Q86YE8 665 aa13.49□□□□□ -0.25
MRPL55-220ENST00000411464 DYNAPQ8N1N2 210 aa13.49□□□□□ -0.25
MRPL55-220ENST00000411464 OR13D1Q8NGV5 346 aa13.49□□□□□ -0.25
MRPL55-220ENST00000411464 ZNF488Q96MN9 340 aa13.49□□□□□ -0.25
MRPL55-220ENST00000411464 FEVQ99581 238 aa13.49□□□□□ -0.25
MRPL55-220ENST00000411464 VNN3Q9NY84 501 aa13.49□□□□□ -0.25
MRPL55-220ENST00000411464 TAS2R1Q9NYW7 299 aa13.49□□□□□ -0.25
MRPL55-220ENST00000411464 ENPP5Q9UJA9 477 aa13.49□□□□□ -0.25
MRPL55-220ENST00000411464 PIGLQ9Y2B2 252 aa13.49□□□□□ -0.25
MRPL55-220ENST00000411464 KLHDC2Q9Y2U9 406 aa13.49□□□□□ -0.25
MRPL55-220ENST00000411464 TBL2Q9Y4P3 447 aaKnown RBP13.49□□□□□ -0.25
MRPL55-220ENST00000411464 ADARB2-AS1A8MUL3 147 aa13.48□□□□□ -0.25
MRPL55-220ENST00000411464 H3BUI4 141 aa13.48□□□□□ -0.25
MRPL55-220ENST00000411464 PRODHO43272 600 aa13.48□□□□□ -0.25
MRPL55-220ENST00000411464 MPIG6BO95866 241 aa13.48□□□□□ -0.25
MRPL55-220ENST00000411464 NRASP01111 189 aa13.48□□□□□ -0.25
MRPL55-220ENST00000411464 TK1P04183 234 aa13.48□□□□□ -0.25
MRPL55-220ENST00000411464 HMGN1P05114 100 aa13.48□□□□□ -0.25
MRPL55-220ENST00000411464 PIPP12273 146 aaPredicted RBP13.48□□□□□ -0.25
MRPL55-220ENST00000411464 ALOX5APP20292 161 aa13.48□□□□□ -0.25
MRPL55-220ENST00000411464 HAAOP46952 286 aa13.48□□□□□ -0.25
MRPL55-220ENST00000411464 CEBPDP49716 269 aaPredicted RBP13.48□□□□□ -0.25
MRPL55-220ENST00000411464 RPS7P62081 194 aaKnown RBP13.48□□□□□ -0.25
MRPL55-220ENST00000411464 ZNF273Q14593 569 aa13.48□□□□□ -0.25
MRPL55-220ENST00000411464 ZNF684Q5T5D7 378 aa13.48□□□□□ -0.25
MRPL55-220ENST00000411464 KCTD18Q6PI47 426 aaPredicted RBP13.48□□□□□ -0.25
MRPL55-220ENST00000411464 TRPM8Q7Z2W7 1104 aa13.48□□□□□ -0.25
MRPL55-220ENST00000411464 OR51E1Q8TCB6 317 aa13.48□□□□□ -0.25
MRPL55-220ENST00000411464 GIPC3Q8TF64 312 aa13.48□□□□□ -0.25
MRPL55-220ENST00000411464 WIPF2Q8TF74 440 aaPredicted RBP13.48□□□□□ -0.25
MRPL55-220ENST00000411464 WNT10AQ9GZT5 417 aa13.48□□□□□ -0.25
MRPL55-220ENST00000411464 OR14J1Q9UGF5 321 aa13.48□□□□□ -0.25
MRPL55-220ENST00000411464 POLDIP2Q9Y2S7 368 aa13.48□□□□□ -0.25
MRPL55-220ENST00000411464 TCRBV5S2A0A599 114 aa13.47□□□□□ -0.25
MRPL55-220ENST00000411464 C17orf98A8MV24 154 aa13.47□□□□□ -0.25
MRPL55-220ENST00000411464 J3QT63 122 aa13.47□□□□□ -0.25
MRPL55-220ENST00000411464 SYNGR1O43759 233 aa13.47□□□□□ -0.25
MRPL55-220ENST00000411464 NOS1APO75052 506 aaPredicted RBP13.47□□□□□ -0.25
MRPL55-220ENST00000411464 ALDOBP05062 364 aa13.47□□□□□ -0.25
MRPL55-220ENST00000411464 PGA5P0DJD9 388 aa13.47□□□□□ -0.25
MRPL55-220ENST00000411464 IGLL1P15814 213 aa13.47□□□□□ -0.25
MRPL55-220ENST00000411464 VDAC2P45880 294 aaPredicted RBP13.47□□□□□ -0.25
MRPL55-220ENST00000411464 HCCSP53701 268 aa13.47□□□□□ -0.25
MRPL55-220ENST00000411464 OR12D2P58182 307 aa13.47□□□□□ -0.25
MRPL55-220ENST00000411464 DYNC1I2Q13409 638 aaKnown RBP13.47□□□□□ -0.25
MRPL55-220ENST00000411464 GINS1Q14691 196 aa13.47□□□□□ -0.25
MRPL55-220ENST00000411464 SLC35D3Q5M8T2 416 aa13.47□□□□□ -0.25
MRPL55-220ENST00000411464 LCN8Q6JVE9 175 aa13.47□□□□□ -0.25
MRPL55-220ENST00000411464 DEGS2Q6QHC5 323 aa13.47□□□□□ -0.25
MRPL55-220ENST00000411464 DHFR2Q86XF0 187 aa13.47□□□□□ -0.25
MRPL55-220ENST00000411464 CPOQ8IVL8 374 aa13.47□□□□□ -0.25
MRPL55-220ENST00000411464 WFDC9Q8NEX5 89 aa13.47□□□□□ -0.25
MRPL55-220ENST00000411464 MROQ9BYG7 248 aa13.47□□□□□ -0.25
MRPL55-220ENST00000411464 PBOV1Q9GZY1 135 aa13.47□□□□□ -0.25
MRPL55-220ENST00000411464 GPR84Q9NQS5 396 aa13.47□□□□□ -0.25
MRPL55-220ENST00000411464 ARL8BQ9NVJ2 186 aa13.47□□□□□ -0.25
MRPL55-220ENST00000411464 FAM206AQ9NX38 181 aa13.47□□□□□ -0.25
MRPL55-220ENST00000411464 A0A1W2PRX2 142 aa13.46□□□□□ -0.25
MRPL55-220ENST00000411464 PSMD9O00233 223 aa13.46□□□□□ -0.25
MRPL55-220ENST00000411464 ZNF728P0DKX0 622 aa13.46□□□□□ -0.25
MRPL55-220ENST00000411464 PF4V1P10720 104 aa13.46□□□□□ -0.25
MRPL55-220ENST00000411464 BLCAPP62952 87 aa13.46□□□□□ -0.25
MRPL55-220ENST00000411464 GK3PQ14409 553 aa13.46□□□□□ -0.25
MRPL55-220ENST00000411464 LCN1P1Q5VSP4 162 aa13.46□□□□□ -0.25
MRPL55-220ENST00000411464 OR5AU1Q8NGC0 362 aa13.46□□□□□ -0.25
MRPL55-220ENST00000411464 OR11H6Q8NGC7 330 aa13.46□□□□□ -0.25
MRPL55-220ENST00000411464 OR8B4Q96RC9 309 aa13.46□□□□□ -0.25
MRPL55-220ENST00000411464 TEAD3Q99594 435 aa13.46□□□□□ -0.25
MRPL55-220ENST00000411464 NRIP2Q9BQI9 281 aa13.46□□□□□ -0.25
MRPL55-220ENST00000411464 YIPF3Q9GZM5 350 aa13.46□□□□□ -0.25
MRPL55-220ENST00000411464 ARL2BPQ9Y2Y0 163 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms