RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 AICDAQ9GZX7 198 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 TCEAL2Q9H3H9 227 aaPredicted RBP9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 RIMS4Q9H426 269 aaPredicted RBP9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 METTL8Q9H825 291 aaKnown RBP9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 C19orf53Q9UNZ5 99 aaPredicted RBP9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 LRP4O75096 1905 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 TGIF2-C20orf24A0A0A6YYL0 155 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 A0A1W2PPV9 198 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 K7EP13 123 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 NME2P1O60361 137 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 RPP14O95059 124 aaKnown RBP9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 BPNT1O95861 308 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 ISG15P05161 165 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 NPSP0C0P6 89 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 THEGLP0DJG4 465 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 OR13C7P0DN81 318 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 LIPCP11150 499 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 C6P13671 934 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 HNRNPA2B1P22626 353 aaKnown RBP9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 ACAA2P42765 397 aaKnown RBP9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 CLDN6P56747 220 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 HLA-DRB3P79483 266 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 PAX5Q02548 391 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 ZNF616Q08AN1 781 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 FOXF1Q12946 379 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 ANKRD55Q3KP44 614 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 ZNF542PQ5EBM4 170 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 WDR38Q5JTN6 314 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 GLYATL3Q5SZD4 288 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 DCST2Q5T1A1 773 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 LCE2DQ5TA82 110 aaPredicted RBP9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 KIRREL2Q6UWL6 708 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 FBXW12Q6X9E4 464 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 TTLL10Q6ZVT0 673 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 ZNF550Q7Z398 422 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 ZNF429Q86V71 674 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 THNSL2Q86YJ6 484 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 FAM219AQ8IW50 185 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 LRRC25Q8N386 305 aaPredicted RBP9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 PLPP7Q8NBV4 271 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 OR51L1Q8NGJ5 315 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 OR10AC1Q8NH08 325 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 TSEN15Q8WW01 171 aaKnown RBP9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 FGGYQ96C11 551 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 RBMXL1Q96E39 390 aaKnown RBP9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 BMFQ96LC9 184 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 OR8B4Q96RC9 309 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 C20orf144Q9BQM9 153 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 MENTQ9BUN1 341 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 C1orf123Q9NWV4 160 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 FLRT3Q9NZU0 649 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 TAC3Q9UHF0 121 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 KLHDC2Q9Y2U9 406 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 MRPS18BQ9Y676 258 aaKnown RBP9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 WIPF3A6NGB9 483 aa9.38□□□□□ -0.91
NIF3L1-204ENST00000409357 CYB5R3P00387 301 aaPredicted RBP9.38□□□□□ -0.91
NIF3L1-204ENST00000409357 APOBEC1P41238 236 aaKnown RBP9.38□□□□□ -0.91
NIF3L1-204ENST00000409357 GRK6P43250 576 aa9.38□□□□□ -0.91
NIF3L1-204ENST00000409357 IDH3GP51553 393 aaPredicted RBP9.38□□□□□ -0.91
NIF3L1-204ENST00000409357 RANP62826 216 aaKnown RBP9.38□□□□□ -0.91
NIF3L1-204ENST00000409357 RBX1P62877 108 aa9.38□□□□□ -0.91
NIF3L1-204ENST00000409357 RPS21P63220 83 aaKnown RBP9.38□□□□□ -0.91
NIF3L1-204ENST00000409357 BTG2P78543 158 aa9.38□□□□□ -0.91
NIF3L1-204ENST00000409357 QRFPP83859 136 aa9.38□□□□□ -0.91
NIF3L1-204ENST00000409357 INSM1Q01101 510 aaPredicted RBP9.38□□□□□ -0.91
NIF3L1-204ENST00000409357 SLC17A1Q14916 467 aa9.38□□□□□ -0.91
NIF3L1-204ENST00000409357 TRMT12Q53H54 448 aaKnown RBP9.38□□□□□ -0.91
NIF3L1-204ENST00000409357 FHL5Q5TD97 284 aa9.38□□□□□ -0.91
NIF3L1-204ENST00000409357 COX18Q8N8Q8 333 aa9.38□□□□□ -0.91
NIF3L1-204ENST00000409357 CDRT4Q8N9R6 151 aa9.38□□□□□ -0.91
NIF3L1-204ENST00000409357 LRRC75AQ8NAA5 344 aa9.38□□□□□ -0.91
NIF3L1-204ENST00000409357 NEK7Q8TDX7 302 aa9.38□□□□□ -0.91
NIF3L1-204ENST00000409357 SLC25A43Q8WUT9 341 aaPredicted RBP9.38□□□□□ -0.91
NIF3L1-204ENST00000409357 C22orf15Q8WYQ4 148 aa9.38□□□□□ -0.91
NIF3L1-204ENST00000409357 KLHDC7BQ96G42 594 aa9.38□□□□□ -0.91
NIF3L1-204ENST00000409357 LMF1Q96S06 567 aa9.38□□□□□ -0.91
NIF3L1-204ENST00000409357 IMMP2LQ96T52 175 aa9.38□□□□□ -0.91
NIF3L1-204ENST00000409357 RTBDNQ9BSG5 229 aaPredicted RBP9.38□□□□□ -0.91
NIF3L1-204ENST00000409357 GPR27Q9NS67 375 aa9.38□□□□□ -0.91
NIF3L1-204ENST00000409357 DHDHQ9UQ10 334 aa9.38□□□□□ -0.91
NIF3L1-204ENST00000409357 ZFP30Q9Y2G7 519 aa9.38□□□□□ -0.91
NIF3L1-204ENST00000409357 HIF3AQ9Y2N7 669 aa9.38□□□□□ -0.91
NIF3L1-204ENST00000409357 TRAV1-1A0A0B4J248 108 aa9.37□□□□□ -0.91
NIF3L1-204ENST00000409357 TMEM238LA0A1B0GVL6 79 aa9.37□□□□□ -0.91
NIF3L1-204ENST00000409357 A0A1W2PS29 197 aa9.37□□□□□ -0.91
NIF3L1-204ENST00000409357 ZNF727A8MUV8 499 aa9.37□□□□□ -0.91
NIF3L1-204ENST00000409357 A8MXE2 369 aa9.37□□□□□ -0.91
NIF3L1-204ENST00000409357 ETV2O00321 342 aaPredicted RBP9.37□□□□□ -0.91
NIF3L1-204ENST00000409357 SMAD9O15198 467 aaKnown RBP9.37□□□□□ -0.91
NIF3L1-204ENST00000409357 HSPA12AO43301 675 aa9.37□□□□□ -0.91
NIF3L1-204ENST00000409357 NGFRP08138 427 aa9.37□□□□□ -0.91
NIF3L1-204ENST00000409357 CST2P09228 141 aa9.37□□□□□ -0.91
NIF3L1-204ENST00000409357 HSD11B1P28845 292 aa9.37□□□□□ -0.91
NIF3L1-204ENST00000409357 CCKBRP32239 447 aa9.37□□□□□ -0.91
NIF3L1-204ENST00000409357 RPL4P36578 427 aaKnown RBP9.37□□□□□ -0.91
NIF3L1-204ENST00000409357 PLAURQ03405 335 aa9.37□□□□□ -0.91
NIF3L1-204ENST00000409357 PRDX1Q06830 199 aaKnown RBP9.37□□□□□ -0.91
NIF3L1-204ENST00000409357 IL13RA2Q14627 380 aa9.37□□□□□ -0.91
NIF3L1-204ENST00000409357 Q6ZSR6 202 aa9.37□□□□□ -0.91
NIF3L1-204ENST00000409357 P4HA3Q7Z4N8 544 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms