RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 SGPP2Q8IWX5 399 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 TMEM156Q8N614 296 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 C19orf47Q8N9M1 422 aaKnown RBP8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 OR5L1Q8NGL2 311 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 PTPMT1Q8WUK0 201 aaPredicted RBP8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 PIGTQ969N2 578 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 ZNF775Q96BV0 537 aaPredicted RBP8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 S100A13Q99584 98 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 SMOC1Q9H4F8 434 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 UFSP2Q9NUQ7 469 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 ZNF319Q9P2F9 582 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 ZNF107Q9UII5 783 aaPredicted RBP8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 MYO7BQ6PIF6 2116 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 UNC13CQ8NB66 2214 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 TGIF2-C20orf24A0A0A6YYL0 155 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 C5orf63A6NC05 138 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 A8MVM7 634 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 TAAR5O14804 337 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 IL33O95760 270 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 TMEM225BP0DP42 221 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 FNDC7Q5VTL7 733 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 C1orf189Q5VU69 101 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 ARRDC1Q8N5I2 433 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 ZNF283Q8N7M2 679 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 KCNG3Q8TAE7 436 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 LIPHQ8WWY8 451 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 DYRK2Q92630 601 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 HOXB13Q92826 284 aaPredicted RBP8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 GNRHR2Q96P88 292 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 SCGB3A2Q96PL1 93 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 FANCD2OSQ96PS1 177 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 OR5B2Q96R09 309 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 MESP1Q9BRJ9 268 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 SLC35B3Q9H1N7 401 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 OR10A2Q9H208 303 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 C1orf123Q9NWV4 160 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 GFOD1Q9NXC2 390 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 DNAJB11Q9UBS4 358 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 DMRT1Q9Y5R6 373 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 A6NCN8 305 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 ZNF850A8MQ14 1090 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 TMEM14DPA8MWL7 114 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 TRGC2P03986 189 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 SELLP14151 372 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 SLC37A1P57057 533 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 ZNF239Q16600 458 aaKnown RBP8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 DEFB119Q8N690 84 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 TMEM217Q8N7C4 229 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 GPHA2Q96T91 129 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 CRLF2Q9HC73 371 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 TREM2Q9NZC2 230 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 ZDHHC8Q9ULC8 765 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 BORCS7-ASMTA0A0B4J1R7 106 aa8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 LOC390937A0A1W2PQ73 354 aa8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 ZNF726A6NNF4 738 aa8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 DHRS7CA6NNS2 312 aa8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 HSPB2A8KAH6 182 aa8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 F5H5K5 113 aa8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 MBPP02686 304 aaPredicted RBP8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 CHRM2P08172 466 aa8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 CXCL1P09341 107 aa8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 ZNF121P58317 390 aaPredicted RBP8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 NSDHLQ15738 373 aa8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 HSPB2Q16082 182 aa8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 CLEC12BQ2HXU8 276 aa8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 URM1Q9BTM9 101 aaKnown RBP8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 MAGT1Q9H0U3 335 aa8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 ZNF581Q9P0T4 197 aa8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 STARD10Q9Y365 291 aa8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 CABIN1Q9Y6J0 2220 aa8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 SHANK1Q9Y566 2161 aa8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 CFPP27918 469 aa8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 CHATP28329 748 aa8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 NTSR1P30989 418 aa8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 GFERP55789 205 aa8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 PIGPP57054 158 aa8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 SLC35A1P78382 337 aa8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 HNF4GQ14541 408 aa8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 HMGN3Q15651 99 aa8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 ABCA11PQ4W5N1 156 aa8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 OPN5Q6U736 354 aa8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 OR2AJ1Q8NGZ0 328 aa8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 C14orf144Q96I85 54 aa8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 PLEKHJ1Q9NW61 149 aa8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 FAM206AQ9NX38 181 aa8.68□□□□□ -1.02
PTCHD4-202ENST00000398738 TMEM150CB9EJG8 249 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 PHOX2AO14813 284 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 ANGPTL7O43827 346 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 SRSF10O75494 262 aaKnown RBP8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 DEDDO75618 318 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 ONECUT2O95948 504 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 HEXBP07686 556 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 NKX6-1P78426 367 aaPredicted RBP8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 PCK2Q16822 640 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 PARM1Q6UWI2 310 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 PTX4Q96A99 478 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 RAB39BQ96DA2 213 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 PBDC1Q9BVG4 233 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 VN1R1Q9GZP7 353 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 LIPGQ9Y5X9 500 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms