RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 C16orf87Q6PH81 154 aa11.59□□□□□ -0.55
MCF2L-209ENST00000397036 BIVMQ86UB2 503 aa11.59□□□□□ -0.55
MCF2L-209ENST00000397036 CALHM1Q8IU99 346 aa11.59□□□□□ -0.55
MCF2L-209ENST00000397036 DMRTC2Q8IXT2 367 aaPredicted RBP11.59□□□□□ -0.55
MCF2L-209ENST00000397036 ZNF611Q8N823 705 aa11.59□□□□□ -0.55
MCF2L-209ENST00000397036 TMEM104Q8NE00 496 aa11.59□□□□□ -0.55
MCF2L-209ENST00000397036 OR4M2Q8NGB6 313 aa11.59□□□□□ -0.55
MCF2L-209ENST00000397036 OR51F2Q8NH61 342 aa11.59□□□□□ -0.55
MCF2L-209ENST00000397036 FAM222BQ8WU58 562 aa11.59□□□□□ -0.55
MCF2L-209ENST00000397036 RFT1Q96AA3 541 aa11.59□□□□□ -0.55
MCF2L-209ENST00000397036 ADAT1Q9BUB4 502 aaKnown RBP11.59□□□□□ -0.55
MCF2L-209ENST00000397036 TMEM59Q9BXS4 323 aa11.59□□□□□ -0.55
MCF2L-209ENST00000397036 ATG5Q9H1Y0 275 aa11.59□□□□□ -0.55
MCF2L-209ENST00000397036 DUSP13Q9UII6 198 aa11.59□□□□□ -0.55
MCF2L-209ENST00000397036 ATP23Q9Y6H3 246 aa11.59□□□□□ -0.55
MCF2L-209ENST00000397036 DOPEY1Q5JWR5 2465 aa11.59□□□□□ -0.55
MCF2L-209ENST00000397036 IGKV1-12A0A0C4DH73 117 aa11.58□□□□□ -0.56
MCF2L-209ENST00000397036 DEFB108AA8MXU0 73 aa11.58□□□□□ -0.56
MCF2L-209ENST00000397036 J3QT63 122 aa11.58□□□□□ -0.56
MCF2L-209ENST00000397036 MLNRO43193 412 aa11.58□□□□□ -0.56
MCF2L-209ENST00000397036 NOS1APO75052 506 aaPredicted RBP11.58□□□□□ -0.56
MCF2L-209ENST00000397036 CYB5AP00167 134 aa11.58□□□□□ -0.56
MCF2L-209ENST00000397036 IGKV1D-12P01611 117 aa11.58□□□□□ -0.56
MCF2L-209ENST00000397036 GTF2F2P13984 249 aa11.58□□□□□ -0.56
MCF2L-209ENST00000397036 CD200P41217 278 aa11.58□□□□□ -0.56
MCF2L-209ENST00000397036 ARL6IP1Q15041 203 aa11.58□□□□□ -0.56
MCF2L-209ENST00000397036 RSU1Q15404 277 aa11.58□□□□□ -0.56
MCF2L-209ENST00000397036 ADIPOQQ15848 244 aa11.58□□□□□ -0.56
MCF2L-209ENST00000397036 SLC22A6Q4U2R8 563 aa11.58□□□□□ -0.56
MCF2L-209ENST00000397036 PYDC2Q56P42 97 aa11.58□□□□□ -0.56
MCF2L-209ENST00000397036 NHLRC3Q5JS37 347 aa11.58□□□□□ -0.56
MCF2L-209ENST00000397036 OR10K2Q6IF99 312 aa11.58□□□□□ -0.56
MCF2L-209ENST00000397036 SLC25A26Q70HW3 274 aa11.58□□□□□ -0.56
MCF2L-209ENST00000397036 LRP11Q86VZ4 500 aa11.58□□□□□ -0.56
MCF2L-209ENST00000397036 Q8N402 240 aa11.58□□□□□ -0.56
MCF2L-209ENST00000397036 ACBD4Q8NC06 268 aa11.58□□□□□ -0.56
MCF2L-209ENST00000397036 OR5D18Q8NGL1 313 aa11.58□□□□□ -0.56
MCF2L-209ENST00000397036 DIRC2Q96SL1 478 aa11.58□□□□□ -0.56
MCF2L-209ENST00000397036 MRPL37Q9BZE1 423 aaKnown RBP11.58□□□□□ -0.56
MCF2L-209ENST00000397036 ZDHHC8Q9ULC8 765 aa11.58□□□□□ -0.56
MCF2L-209ENST00000397036 RNF115Q9Y4L5 304 aa11.58□□□□□ -0.56
MCF2L-209ENST00000397036 ABCA4P78363 2273 aa11.58□□□□□ -0.56
MCF2L-209ENST00000397036 PLSCR5A0PG75 271 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 FAM90A10PA6NDY2 464 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 FAM90A18PA6NE21 464 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 FAM90A16PA6NEW6 464 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 FAM90A20PA6NIJ5 464 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 FAM90A8PA6NJQ4 464 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 FAM90A7PA6NKC0 464 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 FAM90A22PA8MWA6 464 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 FAM90A12PA8MX19 464 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 FAM90A5PA8MXJ8 464 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 FAM90A23PA8MXZ1 464 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 H3BUI4 141 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 SULT1C2O00338 296 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 TPD52L2O43399 206 aaKnown RBP11.57□□□□□ -0.56
MCF2L-209ENST00000397036 CRTAPO75718 401 aaPredicted RBP11.57□□□□□ -0.56
MCF2L-209ENST00000397036 GOSR1O95249 250 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 MPIG6BO95866 241 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 CSTBP04080 98 aaKnown RBP11.57□□□□□ -0.56
MCF2L-209ENST00000397036 MELTFP08582 738 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 FAM90A15PP0C7V4 464 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 FAM90A13PP0C7W8 464 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 FAM90A14PP0C7W9 464 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 FAM90A24PP0C7X0 464 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 MGMTP16455 207 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 CPT2P23786 658 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 CFHR2P36980 270 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 KIR2DL3P43628 341 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 TAS2R20P59543 309 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 EFNB3Q15768 340 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 ADAM5Q6NVV9 412 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 OR56B1Q8NGI3 324 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 OR51T1Q8NGJ9 327 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 AQP3Q92482 292 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 Q96M66 194 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 KCNK15Q9H427 330 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 PLK3Q9H4B4 646 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.57□□□□□ -0.56
MCF2L-209ENST00000397036 TAAR3PQ9P1P4 343 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 FZR1Q9UM11 496 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 POLDIP2Q9Y2S7 368 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 ICE1Q9Y2F5 2266 aa11.57□□□□□ -0.56
MCF2L-209ENST00000397036 KMT2BQ9UMN6 2715 aaPredicted RBP11.57□□□□□ -0.56
MCF2L-209ENST00000397036 FOXI3A8MTJ6 420 aaPredicted RBP11.56□□□□□ -0.56
MCF2L-209ENST00000397036 E7EQL1 145 aa11.56□□□□□ -0.56
MCF2L-209ENST00000397036 GABARAPH6UMI1 98 aa11.56□□□□□ -0.56
MCF2L-209ENST00000397036 SIAH2O43255 324 aa11.56□□□□□ -0.56
MCF2L-209ENST00000397036 SPRY1O43609 319 aaPredicted RBP11.56□□□□□ -0.56
MCF2L-209ENST00000397036 ANGPTL7O43827 346 aa11.56□□□□□ -0.56
MCF2L-209ENST00000397036 CSF3P09919 207 aa11.56□□□□□ -0.56
MCF2L-209ENST00000397036 OR4A8P0C604 315 aa11.56□□□□□ -0.56
MCF2L-209ENST00000397036 APOBEC3AP31941 199 aaPredicted RBP11.56□□□□□ -0.56
MCF2L-209ENST00000397036 IFITM3Q01628 133 aa11.56□□□□□ -0.56
MCF2L-209ENST00000397036 ZNF154Q13106 437 aa11.56□□□□□ -0.56
MCF2L-209ENST00000397036 MAB21L1Q13394 359 aa11.56□□□□□ -0.56
MCF2L-209ENST00000397036 DAZAP2Q15038 168 aaPredicted RBP11.56□□□□□ -0.56
MCF2L-209ENST00000397036 BAK1Q16611 211 aa11.56□□□□□ -0.56
MCF2L-209ENST00000397036 HAGHLQ6PII5 290 aaPredicted RBP11.56□□□□□ -0.56
MCF2L-209ENST00000397036 VHLLQ6RSH7 139 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms