RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 USP54Q70EL1 1684 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 DUS4LO95620 317 aaKnown RBP9.26□□□□□ -0.93
COL4A6-203ENST00000394872 CCL4P13236 92 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 CEACAM3P40198 252 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 KIR2DS2P43631 304 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 RTP5Q14D33 572 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 FAM162BQ5T6X4 162 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 FAM219BQ5XKK7 198 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 ETFRF1Q6IPR1 90 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 COX14Q96I36 57 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 TREM2Q9NZC2 230 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 ADAM20O43506 726 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 TMEM127O75204 238 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 EPHA2P29317 976 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 MAGEA5P43359 124 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 NHLRC1Q6VVB1 395 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 WDR31Q8NA23 367 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 OR4F17Q8NGA8 305 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 PPP1R1CQ8WVI7 109 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 HGDQ93099 445 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 ALG14Q96F25 216 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 ARHGAP5-AS1Q96IT6 56 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 TMPRSS13Q9BYE2 586 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 FAM60AQ9NP50 221 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 SLC6A13Q9NSD5 602 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 ERRFI1Q9UJM3 462 aaPredicted RBP9.25□□□□□ -0.93
COL4A6-203ENST00000394872 TMEM272A0A1B0GTI8 110 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 PATE4P0C8F1 98 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 FABP9Q0Z7S8 132 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 C12orf73Q69YU5 71 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 CALHM3Q86XJ0 350 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 OR8B3Q8NGG8 313 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 OR2Y1Q8NGV0 311 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 OR8B2Q96RD0 313 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 GSX2Q9BZM3 304 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 ONECUT2O95948 504 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 FGF2P09038 288 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 CT62P0C5K7 136 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 CD37P11049 281 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 PTGFRP43088 359 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 MMP15P51511 669 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 SSX7Q7RTT5 188 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 DPF1Q92782 380 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 IL20Q9NYY1 176 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 STRCQ7RTU9 1775 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 RFPL4AA6NLU0 287 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 RFPL4AL1F8VTS6 287 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 ADRB1P08588 477 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 LPAR6P43657 344 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 TMEM128Q5BJH2 165 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 FAAP24Q9BTP7 215 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 CST7O76096 145 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 SPP1P10451 314 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 KCNJ3P48549 501 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 ZXDAP98168 799 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 BAK1Q16611 211 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 GRAMD2BQ96HH9 432 aa9.25□□□□□ -0.93
COL4A6-203ENST00000394872 C21orf140B9A014 251 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 FPR2P25090 351 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 RHOBP62745 196 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 CDK5Q00535 292 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 CLEC12BQ2HXU8 276 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 SP6Q3SY56 376 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 RELL2Q8NC24 303 aaPredicted RBP9.24□□□□□ -0.93
COL4A6-203ENST00000394872 C2CD4CQ8TF44 421 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 BCL2L2Q92843 193 aaPredicted RBP9.24□□□□□ -0.93
COL4A6-203ENST00000394872 FKBP11Q9NYL4 201 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 LRP5O75197 1615 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 CBY3A6NI87 242 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 PNPP00491 289 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 ERVFC1-1P60608 527 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 C4orf17Q53FE4 359 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 NHLRC2Q8NBF2 726 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 OR2D2Q9H210 308 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 TRAV38-1A0A0B4J264 116 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 TCAPO15273 167 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 TBX19O60806 448 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 BAP18Q8IXM2 172 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 MRGPRDQ8TDS7 321 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 CABLES2Q9BTV7 478 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 TMEM208Q9BTX3 173 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 SEBOXQ9HB31 216 aaPredicted RBP9.24□□□□□ -0.93
COL4A6-203ENST00000394872 IL36GQ9NZH8 169 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 IGHV5-10-1A0A0J9YXX1 117 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 A0A1B0GTQ1 180 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 ZNF320A2RRD8 509 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 CALCRP30988 508 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 LINC00303Q3SY05 128 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 DGAT2L6Q6ZPD8 337 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 RHNO1Q9BSD3 238 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 SLC2A8Q9NY64 477 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 FAM157AC9JC47 383 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 TMPRSS2O15393 492 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 AGFG2O95081 481 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 IGHV3-13P01766 116 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 IGHV3-7P01780 117 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 C11orf91Q3C1V1 193 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 ZNF547Q8IVP9 402 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 SMIM4Q8WVI0 70 aa9.24□□□□□ -0.93
COL4A6-203ENST00000394872 ZNF586Q9NXT0 402 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms