RNA–Protein interactions for RNA: ENST00000393211.3

COL17A1-203, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL17A1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-203ENST00000393211 MKI67P46013 3256 aaKnown RBP8.75□□□□□ -1.01
COL17A1-203ENST00000393211 A0A1W2PNR3 127 aa8.74□□□□□ -1.01
COL17A1-203ENST00000393211 TP53I11O14683 189 aa8.74□□□□□ -1.01
COL17A1-203ENST00000393211 EIF3GO75821 320 aaKnown RBP eCLIP8.74□□□□□ -1.01
COL17A1-203ENST00000393211 DKK1O94907 266 aa8.74□□□□□ -1.01
COL17A1-203ENST00000393211 OR8U9P0C7N5 309 aa8.74□□□□□ -1.01
COL17A1-203ENST00000393211 ZNF728P0DKX0 622 aa8.74□□□□□ -1.01
COL17A1-203ENST00000393211 OR5H8P0DN80 308 aa8.74□□□□□ -1.01
COL17A1-203ENST00000393211 LMO1P25800 156 aa8.74□□□□□ -1.01
COL17A1-203ENST00000393211 MAS1LP35410 378 aa8.74□□□□□ -1.01
COL17A1-203ENST00000393211 GLP1RP43220 463 aa8.74□□□□□ -1.01
COL17A1-203ENST00000393211 CLDN17P56750 224 aa8.74□□□□□ -1.01
COL17A1-203ENST00000393211 ENDOGQ14249 297 aaKnown RBP8.74□□□□□ -1.01
COL17A1-203ENST00000393211 TMEM187Q14656 261 aa8.74□□□□□ -1.01
COL17A1-203ENST00000393211 RHEBQ15382 184 aa8.74□□□□□ -1.01
COL17A1-203ENST00000393211 TMEM176BQ3YBM2 270 aaPredicted RBP8.74□□□□□ -1.01
COL17A1-203ENST00000393211 SHISA6Q6ZSJ9 500 aa8.74□□□□□ -1.01
COL17A1-203ENST00000393211 OR8U1Q8NH10 309 aa8.74□□□□□ -1.01
COL17A1-203ENST00000393211 MRPL24Q96A35 216 aaKnown RBP8.74□□□□□ -1.01
COL17A1-203ENST00000393211 NTNG2Q96CW9 530 aa8.74□□□□□ -1.01
COL17A1-203ENST00000393211 SPACA9Q96E40 222 aaPredicted RBP8.74□□□□□ -1.01
COL17A1-203ENST00000393211 C14orf79Q96F83 325 aa8.74□□□□□ -1.01
COL17A1-203ENST00000393211 AKR1E2Q96JD6 320 aa8.74□□□□□ -1.01
COL17A1-203ENST00000393211 SYT3Q9BQG1 590 aa8.74□□□□□ -1.01
COL17A1-203ENST00000393211 SCRT1Q9BWW7 348 aa8.74□□□□□ -1.01
COL17A1-203ENST00000393211 RGCCQ9H4X1 137 aa8.74□□□□□ -1.01
COL17A1-203ENST00000393211 LMAN1LQ9HAT1 526 aa8.74□□□□□ -1.01
COL17A1-203ENST00000393211 METTL1Q9UBP6 276 aaKnown RBP8.74□□□□□ -1.01
COL17A1-203ENST00000393211 MCTS1Q9ULC4 181 aaKnown RBP8.74□□□□□ -1.01
COL17A1-203ENST00000393211 PIGLQ9Y2B2 252 aa8.74□□□□□ -1.01
COL17A1-203ENST00000393211 LAMA2P24043 3122 aaKnown RBP8.73□□□□□ -1.01
COL17A1-203ENST00000393211 ZNF814B7Z6K7 855 aa8.73□□□□□ -1.01
COL17A1-203ENST00000393211 C9JQL5 133 aa8.73□□□□□ -1.01
COL17A1-203ENST00000393211 MBPP02686 304 aaPredicted RBP8.73□□□□□ -1.01
COL17A1-203ENST00000393211 S100A6P06703 90 aa8.73□□□□□ -1.01
COL17A1-203ENST00000393211 PNLIPP16233 465 aa8.73□□□□□ -1.01
COL17A1-203ENST00000393211 FAHP16930 419 aa8.73□□□□□ -1.01
COL17A1-203ENST00000393211 DUSP1P28562 367 aa8.73□□□□□ -1.01
COL17A1-203ENST00000393211 HGFACQ04756 655 aa8.73□□□□□ -1.01
COL17A1-203ENST00000393211 CNN3Q15417 329 aaKnown RBP8.73□□□□□ -1.01
COL17A1-203ENST00000393211 GUK1Q16774 197 aa8.73□□□□□ -1.01
COL17A1-203ENST00000393211 EIF2S3LQ2VIR3 472 aaKnown RBP8.73□□□□□ -1.01
COL17A1-203ENST00000393211 ABCA11PQ4W5N1 156 aa8.73□□□□□ -1.01
COL17A1-203ENST00000393211 FAM69BQ5VUD6 431 aa8.73□□□□□ -1.01
COL17A1-203ENST00000393211 LIAT1Q6ZQX7 453 aa8.73□□□□□ -1.01
COL17A1-203ENST00000393211 C6orf201Q7Z4U5 140 aa8.73□□□□□ -1.01
COL17A1-203ENST00000393211 FAM219AQ8IW50 185 aa8.73□□□□□ -1.01
COL17A1-203ENST00000393211 FOXRED2Q8IWF2 684 aa8.73□□□□□ -1.01
COL17A1-203ENST00000393211 LGI3Q8N145 548 aa8.73□□□□□ -1.01
COL17A1-203ENST00000393211 DEFB119Q8N690 84 aa8.73□□□□□ -1.01
COL17A1-203ENST00000393211 OR8G5Q8NG78 346 aa8.73□□□□□ -1.01
COL17A1-203ENST00000393211 OR10G3Q8NGC4 313 aa8.73□□□□□ -1.01
COL17A1-203ENST00000393211 OR1J1Q8NGS3 322 aa8.73□□□□□ -1.01
COL17A1-203ENST00000393211 C2CD4CQ8TF44 421 aa8.73□□□□□ -1.01
COL17A1-203ENST00000393211 NABP1Q96AH0 204 aa8.73□□□□□ -1.01
COL17A1-203ENST00000393211 LIN37Q96GY3 246 aaPredicted RBP8.73□□□□□ -1.01
COL17A1-203ENST00000393211 C18orf12Q96KH6 178 aa8.73□□□□□ -1.01
COL17A1-203ENST00000393211 CLCC1Q96S66 551 aa8.73□□□□□ -1.01
COL17A1-203ENST00000393211 ZNF251Q9BRH9 671 aa8.73□□□□□ -1.01
COL17A1-203ENST00000393211 NAA11Q9BSU3 229 aaPredicted RBP8.73□□□□□ -1.01
COL17A1-203ENST00000393211 RPS10P5Q9NQ39 176 aa8.73□□□□□ -1.01
COL17A1-203ENST00000393211 RYDENQ9NUL5 291 aaKnown RBP8.73□□□□□ -1.01
COL17A1-203ENST00000393211 ZNF391Q9UJN7 358 aa8.73□□□□□ -1.01
COL17A1-203ENST00000393211 LSM5Q9Y4Y9 91 aaKnown RBP8.73□□□□□ -1.01
COL17A1-203ENST00000393211 SEC16AO15027 2179 aa8.73□□□□□ -1.01
COL17A1-203ENST00000393211 IGKV1D-8A0A087WSZ0 117 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 C7orf77A4D0Y5 90 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 E9PLN8 166 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 F5H5K5 113 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 M0R135 149 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 DHHO43323 396 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 OR2J2O76002 312 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 ACAA1P09110 424 aaPredicted RBP8.72□□□□□ -1.01
COL17A1-203ENST00000393211 ANOS1P23352 680 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 CAMLGP49069 296 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 PIGPP57054 158 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 SNRPEP62304 92 aaKnown RBP8.72□□□□□ -1.01
COL17A1-203ENST00000393211 SRPXP78539 464 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 MRPS34P82930 218 aaKnown RBP8.72□□□□□ -1.01
COL17A1-203ENST00000393211 COL19A1Q14993 1142 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 SHBQ15464 509 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 OR8B8Q15620 311 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 GALNTL5Q7Z4T8 443 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 LURAP1LQ8IV03 231 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 WDSUB1Q8N9V3 476 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 CCDC71LQ8N9Z2 235 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 OR5D18Q8NGL1 313 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 SECTM1Q8WVN6 248 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 MAFIPQ8WZ33 124 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 ZNF799Q96GE5 643 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 ABHD14BQ96IU4 210 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 SEBOXQ9HB31 216 aaPredicted RBP8.72□□□□□ -1.01
COL17A1-203ENST00000393211 ELL3Q9HB65 397 aaPredicted RBP8.72□□□□□ -1.01
COL17A1-203ENST00000393211 C19orf12Q9NSK7 152 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 IL36GQ9NZH8 169 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 TMED3Q9Y3Q3 217 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 MTCH2Q9Y6C9 303 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 TERTO14746 1132 aaKnown RBP8.72□□□□□ -1.01
COL17A1-203ENST00000393211 AGPAT2O15120 278 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 ST8SIA3O43173 380 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms