RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 CD37P11049 281 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 ZNF823P16415 610 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 CRABP1P29762 137 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 RSU1Q15404 277 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 HSPB2Q16082 182 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 PLAC9Q5JTB6 97 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 HEPN1Q6WQI6 88 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 HLA-CQ95604 372 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 GNRHR2Q96P88 292 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 RARRES2Q99969 163 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 CNTNAP3Q9BZ76 1288 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 RCL1Q9Y2P8 373 aaKnown RBP15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 R4GMQ9 66 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 IGLV3-12A0A075B6K2 115 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 LY6G6EA0A0G2JKS1 128 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 RAD51DO75771 328 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 JTBO76095 146 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 HSF1Q00613 529 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 RPUSD3Q6P087 351 aaKnown RBP15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 DTWD2Q8NBA8 298 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 OR13G1Q8NGZ3 307 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 SH3BGRL3Q9H299 93 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 ZDHHC8Q9ULC8 765 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 U3KQA8 63 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 IGHV5-10-1A0A0J9YXX1 117 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 THBS4P35443 961 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 ARFRP1Q13795 201 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 LYPD6Q86Y78 171 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 OR5H2Q8NGV7 314 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 MALSU1Q96EH3 234 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 SUCNR1Q9BXA5 334 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 FAM212BQ9NTI7 297 aaPredicted RBP15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 ADAMTS20P59510 1910 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 LOC390937A0A1W2PQ73 354 aa15.53■□□□□ 0.08
SQSTM1-202ENST00000389805 IGHMP01871 453 aa15.53■□□□□ 0.08
SQSTM1-202ENST00000389805 OR3A2P47893 321 aa15.53■□□□□ 0.08
SQSTM1-202ENST00000389805 BIDP55957 195 aa15.53■□□□□ 0.08
SQSTM1-202ENST00000389805 RABEPKQ7Z6M1 372 aa15.53■□□□□ 0.08
SQSTM1-202ENST00000389805 HSD17B11Q8NBQ5 300 aa15.53■□□□□ 0.08
SQSTM1-202ENST00000389805 PTX4Q96A99 478 aa15.53■□□□□ 0.08
SQSTM1-202ENST00000389805 KCNK17Q96T54 332 aa15.53■□□□□ 0.08
SQSTM1-202ENST00000389805 SMOC1Q9H4F8 434 aa15.53■□□□□ 0.08
SQSTM1-202ENST00000389805 HDGFL3Q9Y3E1 203 aa15.53■□□□□ 0.08
SQSTM1-202ENST00000389805 A0A1W2PNR3 127 aa15.53■□□□□ 0.08
SQSTM1-202ENST00000389805 FOSL2P15408 326 aa15.53■□□□□ 0.08
SQSTM1-202ENST00000389805 AMY2BP19961 511 aa15.53■□□□□ 0.08
SQSTM1-202ENST00000389805 SERPINA2P20848 420 aa15.53■□□□□ 0.08
SQSTM1-202ENST00000389805 PPP1CCP36873 323 aaKnown RBP15.53■□□□□ 0.08
SQSTM1-202ENST00000389805 RBP2P50120 134 aa15.53■□□□□ 0.08
SQSTM1-202ENST00000389805 OCIAD1Q9NX40 245 aa15.53■□□□□ 0.08
SQSTM1-202ENST00000389805 RFNGQ9Y644 331 aa15.53■□□□□ 0.08
SQSTM1-202ENST00000389805 KLK2P20151 261 aa15.52■□□□□ 0.08
SQSTM1-202ENST00000389805 ASCL1P50553 236 aa15.52■□□□□ 0.08
SQSTM1-202ENST00000389805 QRFPP83859 136 aa15.52■□□□□ 0.08
SQSTM1-202ENST00000389805 IL15RAQ13261 267 aa15.52■□□□□ 0.08
SQSTM1-202ENST00000389805 CDCP2Q5VXM1 449 aa15.52■□□□□ 0.08
SQSTM1-202ENST00000389805 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.52■□□□□ 0.08
SQSTM1-202ENST00000389805 NKAIN3Q8N8D7 197 aa15.52■□□□□ 0.08
SQSTM1-202ENST00000389805 MFSD8Q8NHS3 518 aa15.52■□□□□ 0.08
SQSTM1-202ENST00000389805 ST8SIA1Q92185 356 aa15.52■□□□□ 0.08
SQSTM1-202ENST00000389805 PARPBPQ9NWS1 579 aa15.52■□□□□ 0.08
SQSTM1-202ENST00000389805 PPP4R1LQ9P1A2 415 aa15.52■□□□□ 0.08
SQSTM1-202ENST00000389805 RARRES3Q9UL19 164 aa15.52■□□□□ 0.08
SQSTM1-202ENST00000389805 ATXN7O15265 892 aaPredicted RBP15.52■□□□□ 0.07
SQSTM1-202ENST00000389805 SRSF10O75494 262 aaKnown RBP15.52■□□□□ 0.07
SQSTM1-202ENST00000389805 APOBEC1P41238 236 aaKnown RBP15.52■□□□□ 0.07
SQSTM1-202ENST00000389805 ACY1Q03154 408 aa15.52■□□□□ 0.07
SQSTM1-202ENST00000389805 RHEBQ15382 184 aa15.52■□□□□ 0.07
SQSTM1-202ENST00000389805 GLIPR1L1Q6UWM5 242 aa15.52■□□□□ 0.07
SQSTM1-202ENST00000389805 LYPD6BQ8NI32 183 aa15.52■□□□□ 0.07
SQSTM1-202ENST00000389805 CCDC74BQ96LY2 380 aa15.52■□□□□ 0.07
SQSTM1-202ENST00000389805 SLC35B3Q9H1N7 401 aa15.52■□□□□ 0.07
SQSTM1-202ENST00000389805 CHST11Q9NPF2 352 aa15.52■□□□□ 0.07
SQSTM1-202ENST00000389805 EHFQ9NZC4 300 aa15.52■□□□□ 0.07
SQSTM1-202ENST00000389805 SIT1Q9Y3P8 196 aa15.52■□□□□ 0.07
SQSTM1-202ENST00000389805 VSTM2BA6NLU5 285 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 XRCC2O43543 280 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 CXCL1P09341 107 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 MYBPHQ13203 477 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 MFAP5Q13361 173 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 AADACL3Q5VUY0 350 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 STX12Q86Y82 276 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 SLC22A24Q8N4F4 322 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 ARHGAP5-AS1Q96IT6 56 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 PRRX2Q99811 253 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 LPAR5Q9H1C0 372 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 MYOTQ9UBF9 498 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 MEMO1Q9Y316 297 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 A0A087X0M5 115 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 A0A1B0GX30 115 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 LIPT2A6NK58 231 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 CELA2AP08217 269 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 SOD3P08294 240 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 GLI4P10075 376 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 EPHA8P29322 1005 aaPredicted RBP15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 ZNF93P35789 620 aaPredicted RBP15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 SOHLH1Q5JUK2 328 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 CPEB2Q7Z5Q1 589 aaKnown RBP15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 POC1BQ8TC44 478 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms