RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 NUDT10Q8NFP7 164 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 ZNF2Q9BSG1 426 aaPredicted RBP11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 SLC5A6Q9Y289 635 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 NSG2Q9Y328 171 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 GON4LQ3T8J9 2241 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 A0A1W2PN81 502 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 CHRNA7P36544 502 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 WIPI1Q5MNZ9 446 aaPredicted RBP11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 SMIM4Q8WVI0 70 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 OR2A5Q96R48 311 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 GDF15Q99988 308 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 TXNIPQ9H3M7 391 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 ZNF385DQ9H6B1 395 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 AUNIPQ9H7T9 357 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 SPAARA0A1B0GVQ0 90 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 OPN1MWP04001 364 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 OPN1MW2P0DN77 364 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 OPN1MW3P0DN78 364 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 STAC2Q6ZMT1 411 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 KCNJ15Q99712 375 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 AP4M1O00189 453 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 TMEM81Q6P7N7 255 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 GALNT16Q8N428 558 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 ZNF355PQ9NSJ1 428 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 MED29Q9NX70 200 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 CD160O95971 181 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 CT45A6P0DMU7 189 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 CT45A5P0DMU8 189 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 CT45A7P0DMV0 189 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 CT45A8P0DMV1 189 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 CT45A9P0DMV2 189 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 CT45A2Q5DJT8 189 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 CT45A1Q5HYN5 189 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 TRILQ7L0X0 811 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 ZNF485Q8NCK3 441 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 CT45A3Q8NHU0 189 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 C2orf50Q96LR7 162 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 RHNO1Q9BSD3 238 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 PRSS37A4D1T9 235 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 EPOPA6NHQ4 379 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 CD3DP04234 171 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 IL5P05113 134 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 GUSBP08236 651 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 ZNF415Q09FC8 603 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 XAF1Q6GPH4 301 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 OR8G2PQ6IF36 304 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 ANKRD16Q6P6B7 361 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 TMEM88Q6PEY1 159 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 NUMA1Q14980 2115 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 EMP3P54852 163 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 OR2B11Q5JQS5 317 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 PLXDC2Q6UX71 529 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 OR10J5Q8NHC4 309 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 HEYLQ9NQ87 328 aaPredicted RBP11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 OPN4Q9UHM6 478 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 RNF150Q9ULK6 438 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 PRSS47A8MTI9 375 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 FAM157BP0CG42 384 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 BTF3P20290 206 aaKnown RBP11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 PPP1CAP62136 330 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 ACOT6Q3I5F7 207 aaPredicted RBP11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 RHBDD2Q6NTF9 364 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 SLC38A9Q8NBW4 561 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 OR10G3Q8NGC4 313 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 EID2BQ96D98 161 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 GAL3ST2Q9H3Q3 398 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 ZNF71Q9NQZ8 489 aaPredicted RBP11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 ZNF793Q6ZN11 406 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 CALHM3Q86XJ0 350 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 SLC35G3Q8N808 338 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 SCMH1Q96GD3 660 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 ISG20L2Q9H9L3 353 aaKnown RBP11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 FLVCR1Q9Y5Y0 555 aa11.94□□□□□ -0.5
RAPGEF1-201ENST00000372189 RFPL4AA6NLU0 287 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 RFPL4AL1F8VTS6 287 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 M0R135 149 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 GSTP1P09211 210 aaKnown RBP11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 PMS2CLQ68D20 193 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 TMEM108Q6UXF1 575 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 TFAP2EQ6VUC0 442 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 ZNF799Q96GE5 643 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 A0A1W2PQF6 199 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 HPP00738 406 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 EPXP11678 715 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 OR10J1P30954 320 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 SUCLG1P53597 346 aaKnown RBP11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 NHLH1Q02575 133 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 TMEM211Q6ICI0 200 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 BCL2L2Q92843 193 aaPredicted RBP11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 SLC23A1Q9UHI7 598 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 A0A1B0GTL3 188 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 ZNF732B4DXR9 585 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 XRCC2O43543 280 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 ZNF354AO60765 605 aaPredicted RBP11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 CD37P11049 281 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 POU2AF1Q16633 256 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 C6orf201Q7Z4U5 140 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 OR51E1Q8TCB6 317 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 DOK1Q99704 481 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms