RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 VEGFCP49767 419 aa20.36■□□□□ 0.85
SNX3-203ENST00000368979 SNTB1Q13884 538 aaKnown RBP20.36■□□□□ 0.85
SNX3-203ENST00000368979 OR8G1Q15617 311 aa20.36■□□□□ 0.85
SNX3-203ENST00000368979 DNM1P46Q6ZS02 220 aa20.36■□□□□ 0.85
SNX3-203ENST00000368979 SLC25A26Q70HW3 274 aa20.36■□□□□ 0.85
SNX3-203ENST00000368979 WDR86Q86TI4 376 aa20.36■□□□□ 0.85
SNX3-203ENST00000368979 LRP11Q86VZ4 500 aa20.36■□□□□ 0.85
SNX3-203ENST00000368979 ZNF573Q86YE8 665 aa20.36■□□□□ 0.85
SNX3-203ENST00000368979 FAM89BQ8N5H3 189 aa20.36■□□□□ 0.85
SNX3-203ENST00000368979 LINC01560Q8TB33 94 aa20.36■□□□□ 0.85
SNX3-203ENST00000368979 SETD6Q8TBK2 473 aa20.36■□□□□ 0.85
SNX3-203ENST00000368979 OR51I2Q9H344 312 aa20.36■□□□□ 0.85
SNX3-203ENST00000368979 PCNX1Q96RV3 2341 aa20.35■□□□□ 0.85
SNX3-203ENST00000368979 H0YL77 283 aa20.35■□□□□ 0.85
SNX3-203ENST00000368979 HTR3BO95264 441 aa20.35■□□□□ 0.85
SNX3-203ENST00000368979 KLF3P57682 345 aaPredicted RBP20.35■□□□□ 0.85
SNX3-203ENST00000368979 VHLLQ6RSH7 139 aa20.35■□□□□ 0.85
SNX3-203ENST00000368979 TMEM200AQ86VY9 491 aa20.35■□□□□ 0.85
SNX3-203ENST00000368979 ZNF808Q8N4W9 903 aaPredicted RBP20.35■□□□□ 0.85
SNX3-203ENST00000368979 OR10R2Q8NGX6 335 aa20.35■□□□□ 0.85
SNX3-203ENST00000368979 ITLN2Q8WWU7 325 aaPredicted RBP20.35■□□□□ 0.85
SNX3-203ENST00000368979 PKIBQ9C010 78 aa20.35■□□□□ 0.85
SNX3-203ENST00000368979 ESRP2Q9H6T0 727 aaKnown RBP20.35■□□□□ 0.85
SNX3-203ENST00000368979 CSTBP04080 98 aaKnown RBP20.34■□□□□ 0.85
SNX3-203ENST00000368979 PRB1P04280 392 aa20.34■□□□□ 0.85
SNX3-203ENST00000368979 SFTPBP07988 381 aa20.34■□□□□ 0.85
SNX3-203ENST00000368979 CD3GP09693 182 aa20.34■□□□□ 0.85
SNX3-203ENST00000368979 MPZP25189 248 aa20.34■□□□□ 0.85
SNX3-203ENST00000368979 DEFA1P59665 94 aa20.34■□□□□ 0.85
SNX3-203ENST00000368979 DEFA3P59666 94 aa20.34■□□□□ 0.85
SNX3-203ENST00000368979 RNASE12Q5GAN4 147 aaKnown RBP20.34■□□□□ 0.85
SNX3-203ENST00000368979 HACD4Q5VWC8 232 aa20.34■□□□□ 0.85
SNX3-203ENST00000368979 SLC22A25Q6T423 547 aa20.34■□□□□ 0.85
SNX3-203ENST00000368979 POC5Q8NA72 575 aa20.34■□□□□ 0.85
SNX3-203ENST00000368979 Q8NFD4 153 aa20.34■□□□□ 0.85
SNX3-203ENST00000368979 OR56B1Q8NGI3 324 aa20.34■□□□□ 0.85
SNX3-203ENST00000368979 OR52I2Q8NH67 350 aa20.34■□□□□ 0.85
SNX3-203ENST00000368979 CHPT1Q8WUD6 406 aa20.34■□□□□ 0.85
SNX3-203ENST00000368979 Q96M66 194 aa20.34■□□□□ 0.85
SNX3-203ENST00000368979 SELENOIQ9C0D9 397 aa20.34■□□□□ 0.85
SNX3-203ENST00000368979 OCEL1Q9H607 264 aa20.34■□□□□ 0.85
SNX3-203ENST00000368979 ZNF442Q9H7R0 627 aa20.34■□□□□ 0.85
SNX3-203ENST00000368979 CA10Q9NS85 328 aa20.34■□□□□ 0.85
SNX3-203ENST00000368979 DUSP13Q9UII6 198 aa20.34■□□□□ 0.85
SNX3-203ENST00000368979 LRP5LA4QPB2 252 aa20.33■□□□□ 0.85
SNX3-203ENST00000368979 TMEM210A6NLX4 147 aa20.33■□□□□ 0.85
SNX3-203ENST00000368979 FOXI3A8MTJ6 420 aaPredicted RBP20.33■□□□□ 0.85
SNX3-203ENST00000368979 ZG16O60844 167 aa20.33■□□□□ 0.85
SNX3-203ENST00000368979 CLDN14O95500 239 aa20.33■□□□□ 0.85
SNX3-203ENST00000368979 GTF2F2P13984 249 aa20.33■□□□□ 0.85
SNX3-203ENST00000368979 ASAH1Q13510 395 aa20.33■□□□□ 0.85
SNX3-203ENST00000368979 ZNF260Q3ZCT1 412 aa20.33■□□□□ 0.85
SNX3-203ENST00000368979 HAGHLQ6PII5 290 aaPredicted RBP20.33■□□□□ 0.85
SNX3-203ENST00000368979 MKXQ8IYA7 352 aa20.33■□□□□ 0.85
SNX3-203ENST00000368979 C19orf18Q8NEA5 215 aa20.33■□□□□ 0.85
SNX3-203ENST00000368979 OR10AD1Q8NGE0 317 aa20.33■□□□□ 0.85
SNX3-203ENST00000368979 OR51T1Q8NGJ9 327 aa20.33■□□□□ 0.85
SNX3-203ENST00000368979 OR13G1Q8NGZ3 307 aa20.33■□□□□ 0.85
SNX3-203ENST00000368979 MRPL24Q96A35 216 aaKnown RBP20.33■□□□□ 0.85
SNX3-203ENST00000368979 MRPL37Q9BZE1 423 aaKnown RBP20.33■□□□□ 0.85
SNX3-203ENST00000368979 PCDHB16Q9NRJ7 776 aa20.33■□□□□ 0.85
SNX3-203ENST00000368979 RBMX2Q9Y388 322 aaKnown RBP20.33■□□□□ 0.85
SNX3-203ENST00000368979 HEATR1Q9H583 2144 aaKnown RBP20.33■□□□□ 0.85
SNX3-203ENST00000368979 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.32■□□□□ 0.84
SNX3-203ENST00000368979 J3QT63 122 aa20.32■□□□□ 0.84
SNX3-203ENST00000368979 SYNGR1O43759 233 aa20.32■□□□□ 0.84
SNX3-203ENST00000368979 CPT2P23786 658 aa20.32■□□□□ 0.84
SNX3-203ENST00000368979 IL24Q13007 206 aa20.32■□□□□ 0.84
SNX3-203ENST00000368979 OXA1LQ15070 435 aa20.32■□□□□ 0.84
SNX3-203ENST00000368979 DMRTC2Q8IXT2 367 aaPredicted RBP20.32■□□□□ 0.84
SNX3-203ENST00000368979 SPERTQ8NA61 448 aa20.32■□□□□ 0.84
SNX3-203ENST00000368979 FCAMRQ8WWV6 532 aa20.32■□□□□ 0.84
SNX3-203ENST00000368979 AQP3Q92482 292 aa20.32■□□□□ 0.84
SNX3-203ENST00000368979 SLAMF9Q96A28 289 aa20.32■□□□□ 0.84
SNX3-203ENST00000368979 MRPS24Q96EL2 167 aaKnown RBP20.32■□□□□ 0.84
SNX3-203ENST00000368979 PLPPR2Q96GM1 343 aa20.32■□□□□ 0.84
SNX3-203ENST00000368979 SYT3Q9BQG1 590 aa20.32■□□□□ 0.84
SNX3-203ENST00000368979 CXXC4Q9H2H0 198 aa20.32■□□□□ 0.84
SNX3-203ENST00000368979 MSL2Q9HCI7 577 aa20.32■□□□□ 0.84
SNX3-203ENST00000368979 ESPL1Q14674 2120 aa20.32■□□□□ 0.84
SNX3-203ENST00000368979 MEIOCA2RUB1 952 aa20.32■□□□□ 0.84
SNX3-203ENST00000368979 PLA2G10O15496 165 aa20.32■□□□□ 0.84
SNX3-203ENST00000368979 SOCS1O15524 211 aa20.32■□□□□ 0.84
SNX3-203ENST00000368979 NPBWR2P48146 333 aa20.32■□□□□ 0.84
SNX3-203ENST00000368979 ELP2Q6IA86 826 aa20.32■□□□□ 0.84
SNX3-203ENST00000368979 ADAM5Q6NVV9 412 aa20.32■□□□□ 0.84
SNX3-203ENST00000368979 OSR2Q8N2R0 312 aa20.32■□□□□ 0.84
SNX3-203ENST00000368979 MTCH1Q9NZJ7 389 aa20.32■□□□□ 0.84
SNX3-203ENST00000368979 ATP23Q9Y6H3 246 aa20.32■□□□□ 0.84
SNX3-203ENST00000368979 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.31■□□□□ 0.84
SNX3-203ENST00000368979 TUBAL3A6NHL2 446 aa20.31■□□□□ 0.84
SNX3-203ENST00000368979 SHISA9B4DS77 424 aa20.31■□□□□ 0.84
SNX3-203ENST00000368979 CYB5AP00167 134 aa20.31■□□□□ 0.84
SNX3-203ENST00000368979 BCL3P20749 454 aa20.31■□□□□ 0.84
SNX3-203ENST00000368979 GDNFP39905 211 aa20.31■□□□□ 0.84
SNX3-203ENST00000368979 INPP1P49441 399 aa20.31■□□□□ 0.84
SNX3-203ENST00000368979 TMEM50BP56557 158 aa20.31■□□□□ 0.84
SNX3-203ENST00000368979 ZNF154Q13106 437 aa20.31■□□□□ 0.84
SNX3-203ENST00000368979 CENPSQ8N2Z9 138 aa20.31■□□□□ 0.84
SNX3-203ENST00000368979 ZNF843Q8N446 348 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms