RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 GZMMP51124 257 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 MOB1BQ7L9L4 216 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 OR5H6Q8NGV6 325 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 GALMQ96C23 342 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 UQCC2Q9BRT2 126 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 MSL2Q9HCI7 577 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 CACNA1BQ00975 2339 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 WDR90Q96KV7 1748 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 CEP250Q9BV73 2442 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 OR2F2O95006 317 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 HBE1P02100 147 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 FAM58AQ8N1B3 248 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 ARRDC1Q8N5I2 433 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 ZFP62Q8NB50 900 aaPredicted RBP10.25□□□□□ -0.77
SYNE1-204ENST00000367248 NPEPL1Q8NDH3 523 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 MS4A7Q9GZW8 240 aaPredicted RBP10.25□□□□□ -0.77
SYNE1-204ENST00000367248 LIN7CQ9NUP9 197 aaKnown RBP10.25□□□□□ -0.77
SYNE1-204ENST00000367248 MRM2Q9UI43 246 aaKnown RBP10.25□□□□□ -0.77
SYNE1-204ENST00000367248 TINAGQ9UJW2 476 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 CENPVL1A0A0U1RR11 272 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 M0R1X1 148 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 FABP1P07148 127 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 ADH4P08319 380 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 IAPPP10997 89 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 ADRA2CP18825 462 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 CHATP28329 748 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 S100A11P31949 105 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 CCL8P80075 99 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 Q56UQ5 140 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 OR8B3Q8NGG8 313 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 CMTM3Q96MX0 182 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 GUCD1Q96NT3 240 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 OR8B2Q96RD0 313 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 PLSCR3Q9NRY6 295 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 ZNF17P17021 662 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 NME2P22392 152 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 SLC17A5Q9NRA2 495 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 CLEC5AQ9NY25 188 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 OR5V1Q9UGF6 321 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 LOC101059948A0A1B0GTJ6 334 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 F2RL2O00254 374 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 ZNF354AO60765 605 aaPredicted RBP10.24□□□□□ -0.77
SYNE1-204ENST00000367248 CDCP2Q5VXM1 449 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 BSCL2Q96G97 398 aaPredicted RBP10.24□□□□□ -0.77
SYNE1-204ENST00000367248 IGHV3OR15-7A0A075B7D8 119 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 OR5B21A6NL26 309 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 ZFP92A6NM28 416 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 PRR33A8MZF0 331 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 PYCARD-AS1I3L0S3 204 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 CRYZL1O95825 349 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 MVDP53602 400 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 TLE4Q04727 773 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 MAMSTRQ6ZN01 415 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 SRRQ9GZT4 340 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 TAF1LQ8IZX4 1826 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 POM121CA8CG34 1229 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 AQP8O94778 261 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 NGFP01138 241 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 IGKV1D-16P01601 117 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 ACSM4P0C7M7 580 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 XAF1Q6GPH4 301 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 DDOQ99489 341 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 BARX1Q9HBU1 254 aaPredicted RBP10.24□□□□□ -0.77
SYNE1-204ENST00000367248 GPR35Q9HC97 309 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 HES4Q9HCC6 221 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 KLK11Q9UBX7 282 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 ZNF320A2RRD8 509 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 RBP4P02753 201 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 GIPP09681 153 aaPredicted RBP10.24□□□□□ -0.77
SYNE1-204ENST00000367248 DTYMKP23919 212 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 PTGFRP43088 359 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 ERHP84090 104 aaKnown RBP10.24□□□□□ -0.77
SYNE1-204ENST00000367248 C19orf57Q0VDD7 668 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 OR1S2Q8NGQ3 325 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 ACY3Q96HD9 319 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 A0A0J9YW62 118 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 SOX15O60248 233 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 LSM11P83369 360 aaKnown RBP eCLIP10.24□□□□□ -0.77
SYNE1-204ENST00000367248 Q6ZRG5 221 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 ABCA7Q8IZY2 2146 aa10.24□□□□□ -0.77
SYNE1-204ENST00000367248 CST2P09228 141 aa10.23□□□□□ -0.77
SYNE1-204ENST00000367248 APELAP0DMC3 54 aa10.23□□□□□ -0.77
SYNE1-204ENST00000367248 FOXO1Q12778 655 aa10.23□□□□□ -0.77
SYNE1-204ENST00000367248 INPP5JQ15735 1006 aaPredicted RBP10.23□□□□□ -0.77
SYNE1-204ENST00000367248 WDR31Q8NA23 367 aa10.23□□□□□ -0.77
SYNE1-204ENST00000367248 TERB2Q8NHR7 220 aa10.23□□□□□ -0.77
SYNE1-204ENST00000367248 PTP4A1Q93096 173 aa10.23□□□□□ -0.77
SYNE1-204ENST00000367248 ANGPTL4Q9BY76 406 aa10.23□□□□□ -0.77
SYNE1-204ENST00000367248 CYSLTR2Q9NS75 346 aa10.23□□□□□ -0.77
SYNE1-204ENST00000367248 PRELID1Q9Y255 219 aa10.23□□□□□ -0.77
SYNE1-204ENST00000367248 MPGP29372 298 aa10.23□□□□□ -0.77
SYNE1-204ENST00000367248 ACAA2P42765 397 aaKnown RBP10.23□□□□□ -0.77
SYNE1-204ENST00000367248 SSX1Q16384 188 aa10.23□□□□□ -0.77
SYNE1-204ENST00000367248 C17orf107Q6ZR85 190 aa10.23□□□□□ -0.77
SYNE1-204ENST00000367248 OR4C16Q8NGL9 310 aa10.23□□□□□ -0.77
SYNE1-204ENST00000367248 NANPQ8TBE9 248 aa10.23□□□□□ -0.77
SYNE1-204ENST00000367248 IGHV1-45A0A0A0MS14 117 aa10.23□□□□□ -0.77
SYNE1-204ENST00000367248 OR8U1Q8NH10 309 aa10.23□□□□□ -0.77
SYNE1-204ENST00000367248 TGIF2Q9GZN2 237 aa10.23□□□□□ -0.77
SYNE1-204ENST00000367248 PARP12Q9H0J9 701 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms