RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 RAB7AP51149 207 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 P2RX3P56373 397 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 TFF2Q03403 129 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 TLE1Q04724 770 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 PJVKQ0ZLH3 352 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 SLC36A1Q7Z2H8 476 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 OR11G2Q8NGC1 345 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 OR52B4Q8NGK2 314 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 RXFP4Q8TDU9 374 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 MCHR2Q969V1 340 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 ORAI1Q96D31 301 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 GLRX2Q9NS18 164 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 RASL12Q9NYN1 266 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 TAAR3PQ9P1P4 343 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 MPC1Q9Y5U8 109 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 CRYM-AS1A6NIL9 109 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 IAPPP10997 89 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 CBR1P16152 277 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 RAB5AP20339 215 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 SLC6A1P30531 599 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 CDAP32320 146 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 KIR2DS2P43631 304 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 AGFG1P52594 562 aaKnown RBP10.47□□□□□ -0.73
COL9A1-202ENST00000357250 VMA21Q3ZAQ7 101 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 PRSS54Q6PEW0 395 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 OR13G1Q8NGZ3 307 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 OR6S1Q8NH40 331 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 IGHV1OR15-9A0A0B4J2B8 117 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 RNASEK-C17orf49H0YIS7 233 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 CELA2BP08218 269 aaPredicted RBP10.47□□□□□ -0.73
COL9A1-202ENST00000357250 OR5G3P0C626 314 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 CD96P40200 585 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 AKR1C3P42330 323 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 FABP6P51161 128 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 ATP6V1FQ16864 119 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 ACER2Q5QJU3 275 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 OTPQ5XKR4 325 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 OR10G3Q8NGC4 313 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 TMEM56Q96MV1 263 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.47□□□□□ -0.73
COL9A1-202ENST00000357250 CACNA1GO43497 2377 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 G3V3Q6 166 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 ANGPTL7O43827 346 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 CYTIPO60759 359 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 ACSM4P0C7M7 580 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 SLC25A6P12236 298 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 RAC3P60763 192 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 THSD4Q6ZMP0 1018 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 OR8D4Q8NGM9 314 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 RPUSD4Q96CM3 377 aaKnown RBP10.47□□□□□ -0.73
COL9A1-202ENST00000357250 ADGRG7Q96K78 797 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 VSTM2LQ96N03 204 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 C1QTNF6Q9BXI9 259 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 UQCC1Q9NVA1 299 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 MRPS18AQ9NVS2 196 aaKnown RBP10.47□□□□□ -0.73
COL9A1-202ENST00000357250 ZNF638Q14966 1978 aaKnown RBP10.47□□□□□ -0.73
COL9A1-202ENST00000357250 SCN10AQ9Y5Y9 1956 aa10.47□□□□□ -0.73
COL9A1-202ENST00000357250 DNPH1O43598 174 aa10.46□□□□□ -0.73
COL9A1-202ENST00000357250 SPRY1O43609 319 aaPredicted RBP10.46□□□□□ -0.73
COL9A1-202ENST00000357250 HYAL3O43820 417 aaPredicted RBP10.46□□□□□ -0.73
COL9A1-202ENST00000357250 AVPR2P30518 371 aa10.46□□□□□ -0.73
COL9A1-202ENST00000357250 CNN1P51911 297 aaKnown RBP10.46□□□□□ -0.73
COL9A1-202ENST00000357250 ST3GAL2Q16842 350 aa10.46□□□□□ -0.73
COL9A1-202ENST00000357250 ZNF770Q6IQ21 691 aaPredicted RBP10.46□□□□□ -0.73
COL9A1-202ENST00000357250 C17orf107Q6ZR85 190 aa10.46□□□□□ -0.73
COL9A1-202ENST00000357250 PRSS41Q7RTY9 318 aa10.46□□□□□ -0.73
COL9A1-202ENST00000357250 C17orf78Q8N4C9 275 aa10.46□□□□□ -0.73
COL9A1-202ENST00000357250 ZG16BQ96DA0 208 aa10.46□□□□□ -0.73
COL9A1-202ENST00000357250 ARHGAP5-AS1Q96IT6 56 aa10.46□□□□□ -0.73
COL9A1-202ENST00000357250 ADAT1Q9BUB4 502 aaKnown RBP10.46□□□□□ -0.73
COL9A1-202ENST00000357250 C9orf170A2RU37 121 aa10.46□□□□□ -0.73
COL9A1-202ENST00000357250 C5orf67F2Z3F1 127 aa10.46□□□□□ -0.73
COL9A1-202ENST00000357250 DVL1O14640 695 aa10.46□□□□□ -0.73
COL9A1-202ENST00000357250 FGF7P21781 194 aa10.46□□□□□ -0.73
COL9A1-202ENST00000357250 DVL1P1P54792 670 aaPredicted RBP10.46□□□□□ -0.73
COL9A1-202ENST00000357250 PPP1CAP62136 330 aa10.46□□□□□ -0.73
COL9A1-202ENST00000357250 WIPI1Q5MNZ9 446 aaPredicted RBP10.46□□□□□ -0.73
COL9A1-202ENST00000357250 UBE3DQ7Z6J8 389 aa10.46□□□□□ -0.73
COL9A1-202ENST00000357250 ATG4DQ86TL0 474 aaPredicted RBP10.46□□□□□ -0.73
COL9A1-202ENST00000357250 SAT2Q96F10 170 aaPredicted RBP10.46□□□□□ -0.73
COL9A1-202ENST00000357250 CTDSP1Q9GZU7 261 aa10.46□□□□□ -0.73
COL9A1-202ENST00000357250 ARRDC1-AS1Q9H2J1 176 aa10.46□□□□□ -0.73
COL9A1-202ENST00000357250 GPR37O15354 613 aa10.46□□□□□ -0.74
COL9A1-202ENST00000357250 CTRB1P17538 263 aa10.46□□□□□ -0.74
COL9A1-202ENST00000357250 GPM6AP51674 278 aa10.46□□□□□ -0.74
COL9A1-202ENST00000357250 RANP62826 216 aaKnown RBP10.46□□□□□ -0.74
COL9A1-202ENST00000357250 LRRC10Q5BKY1 277 aa10.46□□□□□ -0.74
COL9A1-202ENST00000357250 CTRB2Q6GPI1 263 aa10.46□□□□□ -0.74
COL9A1-202ENST00000357250 WDR74Q6RFH5 385 aaPredicted RBP10.46□□□□□ -0.74
COL9A1-202ENST00000357250 WFDC8Q8IUA0 241 aa10.46□□□□□ -0.74
COL9A1-202ENST00000357250 DEFB108BQ8NET1 73 aa10.46□□□□□ -0.74
COL9A1-202ENST00000357250 MAGT1Q9H0U3 335 aa10.46□□□□□ -0.74
COL9A1-202ENST00000357250 NAA60Q9H7X0 242 aa10.46□□□□□ -0.74
COL9A1-202ENST00000357250 PARP14Q460N5 1801 aa10.46□□□□□ -0.74
COL9A1-202ENST00000357250 MASP2O00187 686 aa10.46□□□□□ -0.74
COL9A1-202ENST00000357250 GPANK1O95872 356 aa10.46□□□□□ -0.74
COL9A1-202ENST00000357250 IRF3Q14653 427 aa10.46□□□□□ -0.74
COL9A1-202ENST00000357250 HLXQ14774 488 aaPredicted RBP10.46□□□□□ -0.74
COL9A1-202ENST00000357250 GLCCI1Q86VQ1 547 aa10.46□□□□□ -0.74
COL9A1-202ENST00000357250 SFTPA2Q8IWL1 248 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms