RNA–Protein interactions for RNA: ENST00000347401.7

COL6A3-202, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-202ENST00000347401 SIAH2O43255 324 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 HOXA6P31267 233 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 CTBSQ01459 385 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 ING1Q9UK53 422 aaPredicted RBP11.99□□□□□ -0.49
COL6A3-202ENST00000347401 M0R082 166 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 FAM87AP0C7U9 286 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 BCL3P20749 454 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 SULT1A1P50225 295 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 RNASEKQ6P5S7 137 aaKnown RBP11.99□□□□□ -0.49
COL6A3-202ENST00000347401 OR1A1Q9P1Q5 309 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 STRCP1A6NGW2 1772 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 H3BVH4 76 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 H7C1C5 153 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 ACRP10323 421 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 ACSM5Q6NUN0 579 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 MS4A6EQ96DS6 147 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 ZNF346Q9UL40 294 aaKnown RBP11.99□□□□□ -0.49
COL6A3-202ENST00000347401 FRG2CA6NGY1 282 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 QDPRP09417 244 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 YBX1P67809 324 aaKnown RBP11.99□□□□□ -0.49
COL6A3-202ENST00000347401 MPV17LQ2QL34 196 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 OVCH2Q7RTZ1 564 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 NUFIP2Q7Z417 695 aaKnown RBP11.99□□□□□ -0.49
COL6A3-202ENST00000347401 OR2C3Q8N628 320 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 TMEM37Q8WXS4 190 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 WBP2Q969T9 261 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 LINC00615Q96LM1 132 aaPredicted RBP11.99□□□□□ -0.49
COL6A3-202ENST00000347401 AUNIPQ9H7T9 357 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 TAAR3PQ9P1P4 343 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 MARF1Q9Y4F3 1742 aaKnown RBP11.99□□□□□ -0.49
COL6A3-202ENST00000347401 AQP7P3A6NL99 342 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 SLC19A1P41440 591 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 HES1Q14469 280 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 UBE2V2Q15819 145 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 PARP12Q9H0J9 701 aaKnown RBP11.99□□□□□ -0.49
COL6A3-202ENST00000347401 TBX19O60806 448 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 OR4B1Q8NGF8 309 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 OR5M1Q8NGP8 315 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 OR1L3Q8NH93 324 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 EID2BQ96D98 161 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 RSG1Q9BU20 258 aa11.99□□□□□ -0.49
COL6A3-202ENST00000347401 ZNF98A6NK75 572 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 SP1P08047 785 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 TMEM65Q6PI78 240 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 PIGTQ969N2 578 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 ZNF764Q96H86 408 aaPredicted RBP11.98□□□□□ -0.49
COL6A3-202ENST00000347401 OR5AC1P0C628 307 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 NSUN5P2Q63ZY6 315 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 RCL1Q9Y2P8 373 aaKnown RBP11.98□□□□□ -0.49
COL6A3-202ENST00000347401 FABP2P12104 132 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 ACKR1Q16570 336 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 ABHD14BQ96IU4 210 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 MAGT1Q9H0U3 335 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 FAM3AP98173 230 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 PRAMEF20Q5VT98 475 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 OR5V1Q9UGF6 321 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 ST6GAL1P15907 406 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 STARD4Q96DR4 205 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 PMCHL2Q9BQD1 86 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 FAM234AQ9H0X4 552 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 GPR37O15354 613 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 DHRS3O75911 302 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 SFT2D2O95562 160 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 HIST1H1EP10412 219 aaKnown RBP11.98□□□□□ -0.49
COL6A3-202ENST00000347401 PPP2CBP62714 309 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 OR1C1Q15619 314 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 TMEM99Q8N816 258 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 RPS4Y2Q8TD47 263 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 TMEM70Q9BUB7 260 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 ZFP30Q9Y2G7 519 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 TCRBV5S1A1TA0A578 114 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 UQCRFS1P47985 274 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 ST3GAL2Q16842 350 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 BSXQ3C1V8 233 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 SLC35E3Q7Z769 313 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 CTU1Q7Z7A3 348 aaKnown RBP11.98□□□□□ -0.49
COL6A3-202ENST00000347401 CARFQ8N187 725 aa11.98□□□□□ -0.49
COL6A3-202ENST00000347401 GEMIN2O14893 280 aaKnown RBP11.97□□□□□ -0.49
COL6A3-202ENST00000347401 TIMP1P01033 207 aa11.97□□□□□ -0.49
COL6A3-202ENST00000347401 RPL34P49207 117 aaKnown RBP11.97□□□□□ -0.49
COL6A3-202ENST00000347401 CDC34P49427 236 aaPredicted RBP11.97□□□□□ -0.49
COL6A3-202ENST00000347401 SLC38A11Q08AI6 406 aa11.97□□□□□ -0.49
COL6A3-202ENST00000347401 RPS19BP1Q86WX3 136 aaKnown RBP11.97□□□□□ -0.49
COL6A3-202ENST00000347401 FBXL6Q8N531 539 aa11.97□□□□□ -0.49
COL6A3-202ENST00000347401 OR10G8Q8NGN5 311 aa11.97□□□□□ -0.49
COL6A3-202ENST00000347401 VSTM2AQ8TAG5 236 aa11.97□□□□□ -0.49
COL6A3-202ENST00000347401 MBD3L1Q8WWY6 194 aa11.97□□□□□ -0.49
COL6A3-202ENST00000347401 SLC25A33Q9BSK2 321 aa11.97□□□□□ -0.49
COL6A3-202ENST00000347401 MRPL13Q9BYD1 178 aaKnown RBP11.97□□□□□ -0.49
COL6A3-202ENST00000347401 SLC25A37Q9NYZ2 338 aa11.97□□□□□ -0.49
COL6A3-202ENST00000347401 VMA21Q3ZAQ7 101 aa11.97□□□□□ -0.49
COL6A3-202ENST00000347401 MMP9P14780 707 aa11.97□□□□□ -0.49
COL6A3-202ENST00000347401 IRS1P35568 1242 aa11.97□□□□□ -0.49
COL6A3-202ENST00000347401 KLK11Q9UBX7 282 aa11.97□□□□□ -0.49
COL6A3-202ENST00000347401 BCAT2O15382 392 aaPredicted RBP11.97□□□□□ -0.49
COL6A3-202ENST00000347401 TTRP02766 147 aa11.97□□□□□ -0.49
COL6A3-202ENST00000347401 CLLU1OSQ5K130 101 aa11.97□□□□□ -0.49
COL6A3-202ENST00000347401 AMMECR1LQ6DCA0 310 aa11.97□□□□□ -0.49
COL6A3-202ENST00000347401 OR51E1Q8TCB6 317 aa11.97□□□□□ -0.49
COL6A3-202ENST00000347401 PTX4Q96A99 478 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms