RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 DMDP11532 3685 aa6.14□□□□□ -1.43
NUP43-201ENST00000340413 CCL21O00585 134 aa6.14□□□□□ -1.43
NUP43-201ENST00000340413 LMX1BO60663 402 aa6.14□□□□□ -1.43
NUP43-201ENST00000340413 SNAPC5O75971 98 aa6.14□□□□□ -1.43
NUP43-201ENST00000340413 HIST1H1DP16402 221 aaKnown RBP6.14□□□□□ -1.43
NUP43-201ENST00000340413 SRP9P49458 86 aaKnown RBP6.14□□□□□ -1.43
NUP43-201ENST00000340413 UBE2MP61081 183 aaKnown RBP6.14□□□□□ -1.43
NUP43-201ENST00000340413 MRPS11P82912 194 aaKnown RBP6.14□□□□□ -1.43
NUP43-201ENST00000340413 ADORA2A-AS1P86434 159 aa6.14□□□□□ -1.43
NUP43-201ENST00000340413 MSMO1Q15800 293 aa6.14□□□□□ -1.43
NUP43-201ENST00000340413 OSR2Q8N2R0 312 aa6.14□□□□□ -1.43
NUP43-201ENST00000340413 HPSE2Q8WWQ2 592 aa6.14□□□□□ -1.43
NUP43-201ENST00000340413 GPER1Q99527 375 aa6.14□□□□□ -1.43
NUP43-201ENST00000340413 TRAF4Q9BUZ4 470 aaPredicted RBP6.14□□□□□ -1.43
NUP43-201ENST00000340413 FAIMQ9NVQ4 179 aa6.14□□□□□ -1.43
NUP43-201ENST00000340413 GLS2Q9UI32 602 aa6.14□□□□□ -1.43
NUP43-201ENST00000340413 TRGV8A0A0C4DH27 118 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 PATE4P0C8F1 98 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 FAM157BP0CG42 384 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 KLF3P57682 345 aaPredicted RBP6.13□□□□□ -1.43
NUP43-201ENST00000340413 SEC61A1P61619 476 aaKnown RBP6.13□□□□□ -1.43
NUP43-201ENST00000340413 VAX1Q5SQQ9 334 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 KCNJ16Q9NPI9 418 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 GPR173Q9NS66 373 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 OPN4Q9UHM6 478 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 TINAGQ9UJW2 476 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 TBC1D24Q9ULP9 559 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 CACNG2Q9Y698 323 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 TANC2Q9HCD6 1990 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 EPG5Q9HCE0 2579 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 PIGBOS1A0A0B4J2F0 54 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 CEACAM18A8MTB9 384 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 RBBP9O75884 186 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 PGA5P0DJD9 388 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 TNFSF4P23510 183 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 LMO1P25800 156 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 CALCRP30988 508 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 RBM11P57052 281 aaKnown RBP6.13□□□□□ -1.43
NUP43-201ENST00000340413 TFF3Q07654 80 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 DBPQ10586 325 aaPredicted RBP6.13□□□□□ -1.43
NUP43-201ENST00000340413 RSU1Q15404 277 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 TRAT1Q6PIZ9 186 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 SLC7A6Q92536 515 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 PAPOLGQ9BWT3 736 aaKnown RBP6.13□□□□□ -1.43
NUP43-201ENST00000340413 ALX4Q9H161 411 aaPredicted RBP6.13□□□□□ -1.43
NUP43-201ENST00000340413 ATG5Q9H1Y0 275 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 IL19Q9UHD0 177 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 A0A0G2JMP0 313 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 A0A0X1KG70 313 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 A0A1W2PPK0 400 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 CLDN14O95500 239 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 KNG1P01042 644 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 THBDP07204 575 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 WNT2P09544 360 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 MGMTP16455 207 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 OR3A4PP47883 348 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 INPP1P49441 399 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 PPOXP50336 477 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 TAS2R46P59540 309 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 PSG7Q13046 419 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 RBM39Q14498 530 aaKnown RBP6.13□□□□□ -1.43
NUP43-201ENST00000340413 ZNF146Q15072 292 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 SURF2Q15527 256 aaPredicted RBP6.13□□□□□ -1.43
NUP43-201ENST00000340413 TRIM16LQ309B1 348 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 PRR30Q53SZ7 412 aaPredicted RBP6.13□□□□□ -1.43
NUP43-201ENST00000340413 OR4M2Q8NGB6 313 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 OR2AE1Q8NHA4 323 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 TMEM171Q8WVE6 324 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 HPS1Q92902 700 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 ABHD1Q96SE0 405 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 ADAT1Q9BUB4 502 aaKnown RBP6.13□□□□□ -1.43
NUP43-201ENST00000340413 POFUT1Q9H488 388 aa6.13□□□□□ -1.43
NUP43-201ENST00000340413 A0A1W2PQ09 198 aa6.12□□□□□ -1.43
NUP43-201ENST00000340413 ZNF850A8MQ14 1090 aa6.12□□□□□ -1.43
NUP43-201ENST00000340413 TRAPPC2LH3BP13 241 aa6.12□□□□□ -1.43
NUP43-201ENST00000340413 LYRM1O43325 122 aa6.12□□□□□ -1.43
NUP43-201ENST00000340413 PAHP00439 452 aa6.12□□□□□ -1.43
NUP43-201ENST00000340413 CSTBP04080 98 aaKnown RBP6.12□□□□□ -1.43
NUP43-201ENST00000340413 AKAIN1P0CW23 69 aa6.12□□□□□ -1.43
NUP43-201ENST00000340413 IGFBP2P18065 325 aa6.12□□□□□ -1.43
NUP43-201ENST00000340413 SLC6A1P30531 599 aa6.12□□□□□ -1.43
NUP43-201ENST00000340413 OR8G1Q15617 311 aa6.12□□□□□ -1.43
NUP43-201ENST00000340413 ODF4Q2M2E3 257 aa6.12□□□□□ -1.43
NUP43-201ENST00000340413 C9orf135Q5VTT2 229 aa6.12□□□□□ -1.43
NUP43-201ENST00000340413 HOGA1Q86XE5 327 aa6.12□□□□□ -1.43
NUP43-201ENST00000340413 ZNF101Q8IZC7 436 aa6.12□□□□□ -1.43
NUP43-201ENST00000340413 TOMM5Q8N4H5 51 aa6.12□□□□□ -1.43
NUP43-201ENST00000340413 PIGCQ92535 297 aa6.12□□□□□ -1.43
NUP43-201ENST00000340413 SCGB3A2Q96PL1 93 aa6.12□□□□□ -1.43
NUP43-201ENST00000340413 RAB9BQ9NP90 201 aa6.12□□□□□ -1.43
NUP43-201ENST00000340413 ALPK2Q86TB3 2170 aa6.12□□□□□ -1.43
NUP43-201ENST00000340413 C5orf63A6NC05 138 aa6.12□□□□□ -1.43
NUP43-201ENST00000340413 PDCD6O75340 191 aa6.12□□□□□ -1.43
NUP43-201ENST00000340413 NGFP01138 241 aa6.12□□□□□ -1.43
NUP43-201ENST00000340413 IFITM3Q01628 133 aa6.12□□□□□ -1.43
NUP43-201ENST00000340413 LY6G6FQ5SQ64 297 aa6.12□□□□□ -1.43
NUP43-201ENST00000340413 OTPQ5XKR4 325 aa6.12□□□□□ -1.43
NUP43-201ENST00000340413 FAHD2BQ6P2I3 314 aaPredicted RBP6.12□□□□□ -1.43
NUP43-201ENST00000340413 ZNF880Q6PDB4 577 aa6.12□□□□□ -1.43
NUP43-201ENST00000340413 OR8H2Q8N162 312 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms