RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 C11orf91Q3C1V1 193 aa12.61□□□□□ -0.39
PRKN-201ENST00000338468 OGFRL1Q5TC84 451 aaPredicted RBP12.61□□□□□ -0.39
PRKN-201ENST00000338468 SLC36A1Q7Z2H8 476 aa12.61□□□□□ -0.39
PRKN-201ENST00000338468 ANGPTL5Q86XS5 388 aa12.61□□□□□ -0.39
PRKN-201ENST00000338468 SYS1Q8N2H4 156 aa12.61□□□□□ -0.39
PRKN-201ENST00000338468 POC1AQ8NBT0 407 aa12.61□□□□□ -0.39
PRKN-201ENST00000338468 LY6G5BQ8NDX9 201 aa12.61□□□□□ -0.39
PRKN-201ENST00000338468 CCDC54Q8NEL0 328 aa12.61□□□□□ -0.39
PRKN-201ENST00000338468 ZNF671Q8TAW3 534 aa12.61□□□□□ -0.39
PRKN-201ENST00000338468 CNIH3Q8TBE1 160 aa12.61□□□□□ -0.39
PRKN-201ENST00000338468 ZNF418Q8TF45 676 aaPredicted RBP12.61□□□□□ -0.39
PRKN-201ENST00000338468 ADAT3Q96EY9 351 aaPredicted RBP12.61□□□□□ -0.39
PRKN-201ENST00000338468 ZNF48Q96MX3 618 aaPredicted RBP12.61□□□□□ -0.39
PRKN-201ENST00000338468 TBX15Q96SF7 602 aa12.61□□□□□ -0.39
PRKN-201ENST00000338468 CHST5Q9GZS9 411 aa12.61□□□□□ -0.39
PRKN-201ENST00000338468 FGF20Q9NP95 211 aaPredicted RBP12.61□□□□□ -0.39
PRKN-201ENST00000338468 C8orf4Q9NR00 106 aa12.61□□□□□ -0.39
PRKN-201ENST00000338468 RPUSD1Q9UJJ7 312 aaKnown RBP12.61□□□□□ -0.39
PRKN-201ENST00000338468 RPL36Q9Y3U8 105 aaKnown RBP12.61□□□□□ -0.39
PRKN-201ENST00000338468 MGAM2Q2M2H8 2515 aa12.61□□□□□ -0.39
PRKN-201ENST00000338468 OR2AT4A6NND4 320 aa12.6□□□□□ -0.39
PRKN-201ENST00000338468 ZNF879B4DU55 563 aa12.6□□□□□ -0.39
PRKN-201ENST00000338468 SIGLEC5O15389 551 aa12.6□□□□□ -0.39
PRKN-201ENST00000338468 NOS1APO75052 506 aaPredicted RBP12.6□□□□□ -0.39
PRKN-201ENST00000338468 ECDO95905 644 aaPredicted RBP12.6□□□□□ -0.39
PRKN-201ENST00000338468 LIPFP07098 398 aa12.6□□□□□ -0.39
PRKN-201ENST00000338468 HTR1AP08908 422 aa12.6□□□□□ -0.39
PRKN-201ENST00000338468 ACAA1P09110 424 aaPredicted RBP12.6□□□□□ -0.39
PRKN-201ENST00000338468 LIMS3P0CW19 117 aa12.6□□□□□ -0.39
PRKN-201ENST00000338468 LIMS4P0CW20 117 aa12.6□□□□□ -0.39
PRKN-201ENST00000338468 FPR2P25090 351 aa12.6□□□□□ -0.39
PRKN-201ENST00000338468 ACTA2P62736 377 aa12.6□□□□□ -0.39
PRKN-201ENST00000338468 ACTG2P63267 376 aa12.6□□□□□ -0.39
PRKN-201ENST00000338468 ALKBH1Q13686 389 aaKnown RBP12.6□□□□□ -0.39
PRKN-201ENST00000338468 TMEM244Q5VVB8 128 aa12.6□□□□□ -0.39
PRKN-201ENST00000338468 ACP7Q6ZNF0 438 aa12.6□□□□□ -0.39
PRKN-201ENST00000338468 C9orf139Q6ZV77 190 aa12.6□□□□□ -0.39
PRKN-201ENST00000338468 ZNF573Q86YE8 665 aa12.6□□□□□ -0.39
PRKN-201ENST00000338468 BPIFB2Q8N4F0 458 aa12.6□□□□□ -0.39
PRKN-201ENST00000338468 ZDHHC22Q8N966 263 aa12.6□□□□□ -0.39
PRKN-201ENST00000338468 OR51A4Q8NGJ6 313 aa12.6□□□□□ -0.39
PRKN-201ENST00000338468 TRMT10AQ8TBZ6 339 aaKnown RBP12.6□□□□□ -0.39
PRKN-201ENST00000338468 NPRL2Q8WTW4 380 aa12.6□□□□□ -0.39
PRKN-201ENST00000338468 CYGBQ8WWM9 190 aa12.6□□□□□ -0.39
PRKN-201ENST00000338468 TMIGD2Q96BF3 282 aa12.6□□□□□ -0.39
PRKN-201ENST00000338468 NRIP2Q9BQI9 281 aa12.6□□□□□ -0.39
PRKN-201ENST00000338468 ADI1Q9BV57 179 aa12.6□□□□□ -0.39
PRKN-201ENST00000338468 JAM3Q9BX67 310 aa12.6□□□□□ -0.39
PRKN-201ENST00000338468 SUCNR1Q9BXA5 334 aa12.6□□□□□ -0.39
PRKN-201ENST00000338468 SIRPDQ9H106 197 aa12.6□□□□□ -0.39
PRKN-201ENST00000338468 PLEKHA1Q9HB21 404 aa12.6□□□□□ -0.39
PRKN-201ENST00000338468 INPP5EQ9NRR6 644 aa12.6□□□□□ -0.39
PRKN-201ENST00000338468 NKX1-2Q9UD57 310 aaPredicted RBP12.6□□□□□ -0.39
PRKN-201ENST00000338468 MAB21L2Q9Y586 359 aa12.6□□□□□ -0.39
PRKN-201ENST00000338468 TRAV40A0A0B4J280 105 aa12.59□□□□□ -0.39
PRKN-201ENST00000338468 IGKV1-9A0A0C4DH69 117 aa12.59□□□□□ -0.39
PRKN-201ENST00000338468 NDUFB3O43676 98 aa12.59□□□□□ -0.39
PRKN-201ENST00000338468 ERVK11-1P61568 191 aa12.59□□□□□ -0.39
PRKN-201ENST00000338468 TTC23Q5W5X9 447 aa12.59□□□□□ -0.39
PRKN-201ENST00000338468 LAIR2Q6ISS4 152 aa12.59□□□□□ -0.39
PRKN-201ENST00000338468 EGFL6Q8IUX8 553 aa12.59□□□□□ -0.39
PRKN-201ENST00000338468 BATF2Q8N1L9 274 aa12.59□□□□□ -0.39
PRKN-201ENST00000338468 DHRSXQ8N5I4 330 aa12.59□□□□□ -0.39
PRKN-201ENST00000338468 CD177Q8N6Q3 437 aa12.59□□□□□ -0.39
PRKN-201ENST00000338468 SIGLECL1Q8N7X8 197 aa12.59□□□□□ -0.39
PRKN-201ENST00000338468 PNLDC1Q8NA58 520 aaKnown RBP12.59□□□□□ -0.39
PRKN-201ENST00000338468 C10orf35Q96D05 121 aa12.59□□□□□ -0.39
PRKN-201ENST00000338468 SDSLQ96GA7 329 aa12.59□□□□□ -0.39
PRKN-201ENST00000338468 WDFY2Q96P53 400 aa12.59□□□□□ -0.39
PRKN-201ENST00000338468 HES4Q9HCC6 221 aa12.59□□□□□ -0.39
PRKN-201ENST00000338468 RASL12Q9NYN1 266 aa12.59□□□□□ -0.39
PRKN-201ENST00000338468 FAM230AA0A1W2PPH8 454 aa12.58□□□□□ -0.4
PRKN-201ENST00000338468 NKX6-3A6NJ46 265 aa12.58□□□□□ -0.4
PRKN-201ENST00000338468 F8VVB4 439 aa12.58□□□□□ -0.4
PRKN-201ENST00000338468 F8VWA3 439 aa12.58□□□□□ -0.4
PRKN-201ENST00000338468 GNAO1P09471 354 aa12.58□□□□□ -0.4
PRKN-201ENST00000338468 ETV1P50549 477 aa12.58□□□□□ -0.4
PRKN-201ENST00000338468 ARF6P62330 175 aa12.58□□□□□ -0.4
PRKN-201ENST00000338468 IL13RA1P78552 427 aa12.58□□□□□ -0.4
PRKN-201ENST00000338468 GABPB1Q06547 395 aaPredicted RBP12.58□□□□□ -0.4
PRKN-201ENST00000338468 IL24Q13007 206 aa12.58□□□□□ -0.4
PRKN-201ENST00000338468 KLHL22Q53GT1 634 aa12.58□□□□□ -0.4
PRKN-201ENST00000338468 LRRC10Q5BKY1 277 aa12.58□□□□□ -0.4
PRKN-201ENST00000338468 ZNRF1Q8ND25 227 aa12.58□□□□□ -0.4
PRKN-201ENST00000338468 C8orf46Q8TAG6 207 aa12.58□□□□□ -0.4
PRKN-201ENST00000338468 ZFAND2BQ8WV99 257 aa12.58□□□□□ -0.4
PRKN-201ENST00000338468 PP6455Q8WZ26 134 aa12.58□□□□□ -0.4
PRKN-201ENST00000338468 FGGYQ96C11 551 aa12.58□□□□□ -0.4
PRKN-201ENST00000338468 MED30Q96HR3 178 aa12.58□□□□□ -0.4
PRKN-201ENST00000338468 C1orf147Q96MC9 270 aaPredicted RBP12.58□□□□□ -0.4
PRKN-201ENST00000338468 PCGF1Q9BSM1 259 aa12.58□□□□□ -0.4
PRKN-201ENST00000338468 DCTN5Q9BTE1 182 aa12.58□□□□□ -0.4
PRKN-201ENST00000338468 PKIBQ9C010 78 aa12.58□□□□□ -0.4
PRKN-201ENST00000338468 CNTD2Q9H8S5 307 aa12.58□□□□□ -0.4
PRKN-201ENST00000338468 SLC7A11Q9UPY5 501 aa12.58□□□□□ -0.4
PRKN-201ENST00000338468 CENPVL3A0A0U1RRI6 287 aa12.57□□□□□ -0.4
PRKN-201ENST00000338468 RFPL4AA6NLU0 287 aa12.57□□□□□ -0.4
PRKN-201ENST00000338468 RFPL4AL1F8VTS6 287 aa12.57□□□□□ -0.4
PRKN-201ENST00000338468 GPR37O15354 613 aa12.57□□□□□ -0.4
PRKN-201ENST00000338468 GATBO75879 557 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms