RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 SIRT7Q9NRC8 400 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 H3BQ15 152 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 F12P00748 615 aaPredicted RBP8.8□□□□□ -1
COL4A6-201ENST00000334504 FAM157BP0CG42 384 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 MYOGP15173 224 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 UQCRFS1P47985 274 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 UBE2V2Q15819 145 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 VWA2Q5GFL6 755 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 NSUN5P2Q63ZY6 315 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 OR52L2PQ8NGH6 319 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 NAA60Q9H7X0 242 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 OR4C46A6NHA9 309 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 OR5AC1P0C628 307 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 INSM1Q01101 510 aaPredicted RBP8.8□□□□□ -1
COL4A6-201ENST00000334504 SRSF9Q13242 221 aaKnown RBP eCLIP8.8□□□□□ -1
COL4A6-201ENST00000334504 Q56UQ5 140 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 OR4A4PQ8NGN8 299 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.8□□□□□ -1
COL4A6-201ENST00000334504 PELI1Q96FA3 418 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 GPR61Q9BZJ8 451 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 GAGE10A6NGK3 116 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 ZNF749O43361 778 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 HIST1H1DP16402 221 aaKnown RBP8.79□□□□□ -1
COL4A6-201ENST00000334504 CDAP32320 146 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 CCR2P41597 374 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 LPAR6P43657 344 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 B3GNTL1Q67FW5 361 aaPredicted RBP8.79□□□□□ -1
COL4A6-201ENST00000334504 TRAT1Q6PIZ9 186 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 C20orf196Q8IYI0 205 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 FAM174AQ8TBP5 190 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 OXGR1Q96P68 337 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 HSPB8Q9UJY1 196 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 G6PCP35575 357 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 FUT6P51993 359 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 FAM219BQ5XKK7 198 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 OR8A1Q8NGG7 326 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 EGLN1Q9GZT9 426 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 ICAM5Q9UMF0 924 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 V9GYH0 126 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 PRKNO60260 465 aaPredicted RBP8.79□□□□□ -1
COL4A6-201ENST00000334504 Q7L0L9 218 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 DEDDO75618 318 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 YPEL5P62699 121 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 RHOBP62745 196 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 CYB5R2Q6BCY4 276 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 MRPL54Q6P161 138 aaKnown RBP8.79□□□□□ -1
COL4A6-201ENST00000334504 OR4F17Q8NGA8 305 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 MISP3Q96FF7 219 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 OR51M1Q9H341 326 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 SLC7A10Q9NS82 523 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 CLEC5AQ9NY25 188 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 A0A1B0GV90 55 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 TMEM189-UBE2V1I3L0A0 370 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 GFYI3L273 518 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 PLPP2O43688 288 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 KLK8O60259 260 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 ADAP1O75689 374 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 SBK3P0C264 359 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 GAMTQ14353 236 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 OR1C1Q15619 314 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 MPV17LQ2QL34 196 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 UBALD1Q8TB05 177 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 ZDHHC16Q969W1 377 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 DOK5Q9P104 306 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 NAGKQ9UJ70 344 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 RGPD2P0DJD1 1756 aa8.79□□□□□ -1
COL4A6-201ENST00000334504 MFNGO00587 321 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 CDK2AP1O14519 115 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 CA2P00918 260 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 IER3P46695 156 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 CSNK1EP49674 416 aaKnown RBP8.78□□□□□ -1
COL4A6-201ENST00000334504 LSM11P83369 360 aaKnown RBP eCLIP8.78□□□□□ -1
COL4A6-201ENST00000334504 CALHM3Q86XJ0 350 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 D2HGDHQ8N465 521 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 EDARADDQ8WWZ3 215 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 TRGV8A0A0C4DH27 118 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 OPRK1P41145 380 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 CEBPDP49716 269 aaPredicted RBP8.78□□□□□ -1
COL4A6-201ENST00000334504 ZNF77Q15935 545 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 WDR38Q5JTN6 314 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 ADAT3Q96EY9 351 aaPredicted RBP8.78□□□□□ -1
COL4A6-201ENST00000334504 CACNG5Q9UF02 275 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 EXOGQ9Y2C4 368 aaKnown RBP8.78□□□□□ -1
COL4A6-201ENST00000334504 C11orf94C9JXX5 98 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 UPK1AO00322 258 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 ETHE1O95571 254 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 APCSP02743 223 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 CEACAM6P40199 344 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 OR3A1P47881 315 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 COL19A1Q14993 1142 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 SH2D5Q6ZV89 423 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 CHAC2Q8WUX2 184 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 ABHD1Q96SE0 405 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 TMEM140Q9NV12 185 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 CXorf65A6NEN9 183 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 K7ESM1 405 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 MBPP02686 304 aaPredicted RBP8.78□□□□□ -1
COL4A6-201ENST00000334504 SP1P08047 785 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 AREGP15514 252 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 FKBP2P26885 142 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms