RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 SIGLEC5O15389 551 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 TSPAN2O60636 221 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 GLAP06280 429 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 TAS2R30P59541 319 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 SIGLEC14Q08ET2 396 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 D2HGDHQ8N465 521 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 OR2AE1Q8NHA4 323 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 RXFP4Q8TDU9 374 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 RDH5Q92781 318 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 CRLF2Q9HC73 371 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 NLRC5Q86WI3 1866 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 EP400Q96L91 3159 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 ISG15P05161 165 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 LPAL2Q16609 132 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 CEACAM16Q2WEN9 425 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 NAA60Q9H7X0 242 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 ANXA10Q9UJ72 324 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 KCNAB3O43448 404 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 CST7O76096 145 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 CER1O95813 267 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 ERVK-16P61578 105 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 ZP4Q12836 540 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 UTP23Q9BRU9 249 aaKnown RBP13.04□□□□□ -0.32
TCOF1-201ENST00000323668 WBP1LQ9NX94 342 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 TDRD6O60522 2096 aaKnown RBP13.04□□□□□ -0.32
TCOF1-201ENST00000323668 LRP5LA4QPB2 252 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 H7C1Q1 480 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 TUSC2O75896 110 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 LSM6P62312 80 aaKnown RBP13.04□□□□□ -0.32
TCOF1-201ENST00000323668 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.04□□□□□ -0.32
TCOF1-201ENST00000323668 PPP1R35Q8TAP8 253 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 MRPS24Q96EL2 167 aaKnown RBP13.04□□□□□ -0.32
TCOF1-201ENST00000323668 SDSLQ96GA7 329 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 CCDC74BQ96LY2 380 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 LHX6Q9UPM6 363 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 FAM74A7A6NL05 159 aa13.03□□□□□ -0.32
TCOF1-201ENST00000323668 OR5AC1P0C628 307 aa13.03□□□□□ -0.32
TCOF1-201ENST00000323668 RAB31Q13636 194 aa13.03□□□□□ -0.32
TCOF1-201ENST00000323668 RAB35Q15286 201 aa13.03□□□□□ -0.32
TCOF1-201ENST00000323668 FAM74A3Q4VXF1 159 aa13.03□□□□□ -0.32
TCOF1-201ENST00000323668 TMEM123Q8N131 208 aa13.03□□□□□ -0.32
TCOF1-201ENST00000323668 OBP2BQ9NPH6 170 aa13.03□□□□□ -0.32
TCOF1-201ENST00000323668 MTCH2Q9Y6C9 303 aa13.03□□□□□ -0.32
TCOF1-201ENST00000323668 DEGS1O15121 323 aa13.03□□□□□ -0.32
TCOF1-201ENST00000323668 NQO2P16083 231 aa13.03□□□□□ -0.32
TCOF1-201ENST00000323668 TESK1Q15569 626 aa13.03□□□□□ -0.32
TCOF1-201ENST00000323668 LCN15Q6UWW0 184 aa13.03□□□□□ -0.32
TCOF1-201ENST00000323668 SPEM1Q8N4L4 309 aa13.03□□□□□ -0.32
TCOF1-201ENST00000323668 SLC35B3Q9H1N7 401 aa13.03□□□□□ -0.32
TCOF1-201ENST00000323668 HAAOP46952 286 aa13.03□□□□□ -0.32
TCOF1-201ENST00000323668 DHODHQ02127 395 aa13.03□□□□□ -0.32
TCOF1-201ENST00000323668 PDCD1Q15116 288 aa13.03□□□□□ -0.32
TCOF1-201ENST00000323668 ADIRFQ15847 76 aa13.03□□□□□ -0.32
TCOF1-201ENST00000323668 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.03□□□□□ -0.32
TCOF1-201ENST00000323668 THNSL2Q86YJ6 484 aa13.03□□□□□ -0.32
TCOF1-201ENST00000323668 KCNE4Q8WWG9 221 aa13.03□□□□□ -0.32
TCOF1-201ENST00000323668 RAB39BQ96DA2 213 aa13.03□□□□□ -0.32
TCOF1-201ENST00000323668 FOXB1Q99853 325 aa13.03□□□□□ -0.32
TCOF1-201ENST00000323668 LOC105371267A0A1B0GV96 52 aa13.02□□□□□ -0.32
TCOF1-201ENST00000323668 BTBD17A6NE02 478 aa13.02□□□□□ -0.32
TCOF1-201ENST00000323668 NXPH2O95156 264 aa13.02□□□□□ -0.32
TCOF1-201ENST00000323668 VAX1Q5SQQ9 334 aa13.02□□□□□ -0.32
TCOF1-201ENST00000323668 C1orf87Q8N0U7 546 aa13.02□□□□□ -0.32
TCOF1-201ENST00000323668 PUSL1Q8N0Z8 303 aaKnown RBP13.02□□□□□ -0.32
TCOF1-201ENST00000323668 ROBO4Q8WZ75 1007 aa13.02□□□□□ -0.32
TCOF1-201ENST00000323668 NTNG2Q96CW9 530 aa13.02□□□□□ -0.32
TCOF1-201ENST00000323668 YKT6O15498 198 aa13.02□□□□□ -0.32
TCOF1-201ENST00000323668 CCL7P80098 99 aa13.02□□□□□ -0.32
TCOF1-201ENST00000323668 FZD5Q13467 585 aa13.02□□□□□ -0.32
TCOF1-201ENST00000323668 TEX30Q5JUR7 227 aa13.02□□□□□ -0.32
TCOF1-201ENST00000323668 TMEM104Q8NE00 496 aa13.02□□□□□ -0.32
TCOF1-201ENST00000323668 EXTL1Q92935 676 aa13.02□□□□□ -0.32
TCOF1-201ENST00000323668 ADIPOR1Q96A54 375 aa13.02□□□□□ -0.32
TCOF1-201ENST00000323668 APH1AQ96BI3 265 aa13.02□□□□□ -0.32
TCOF1-201ENST00000323668 LANCL2Q9NS86 450 aa13.02□□□□□ -0.32
TCOF1-201ENST00000323668 LMX1BO60663 402 aa13.02□□□□□ -0.33
TCOF1-201ENST00000323668 RFC3P40938 356 aa13.02□□□□□ -0.33
TCOF1-201ENST00000323668 MEOX2P50222 304 aa13.02□□□□□ -0.33
TCOF1-201ENST00000323668 GUCA2BQ16661 112 aa13.02□□□□□ -0.33
TCOF1-201ENST00000323668 C2orf68Q2NKX9 166 aa13.02□□□□□ -0.33
TCOF1-201ENST00000323668 BRICD5Q6PL45 260 aa13.02□□□□□ -0.33
TCOF1-201ENST00000323668 HOGA1Q86XE5 327 aa13.02□□□□□ -0.33
TCOF1-201ENST00000323668 FAM24BQ8N5W8 94 aa13.02□□□□□ -0.33
TCOF1-201ENST00000323668 AQP3Q92482 292 aa13.02□□□□□ -0.33
TCOF1-201ENST00000323668 LPAR5Q9H1C0 372 aa13.02□□□□□ -0.33
TCOF1-201ENST00000323668 IL11P20809 199 aa13.02□□□□□ -0.33
TCOF1-201ENST00000323668 MPGP29372 298 aa13.02□□□□□ -0.33
TCOF1-201ENST00000323668 EIF2S3P41091 472 aaKnown RBP13.02□□□□□ -0.33
TCOF1-201ENST00000323668 KCNJ3P48549 501 aa13.02□□□□□ -0.33
TCOF1-201ENST00000323668 ASCL1P50553 236 aa13.02□□□□□ -0.33
TCOF1-201ENST00000323668 OR8G2PQ6IF36 304 aa13.02□□□□□ -0.33
TCOF1-201ENST00000323668 C15orf54Q8N8G6 183 aa13.02□□□□□ -0.33
TCOF1-201ENST00000323668 ZNF519Q8TB69 540 aa13.02□□□□□ -0.33
TCOF1-201ENST00000323668 ZNF391Q9UJN7 358 aa13.02□□□□□ -0.33
TCOF1-201ENST00000323668 GBF1Q92538 1859 aa13.02□□□□□ -0.33
TCOF1-201ENST00000323668 A0A0U1RQK1 487 aa13.01□□□□□ -0.33
TCOF1-201ENST00000323668 ABCD4O14678 606 aa13.01□□□□□ -0.33
TCOF1-201ENST00000323668 RPP30P78346 268 aaKnown RBP13.01□□□□□ -0.33
TCOF1-201ENST00000323668 IL13RA2Q14627 380 aa13.01□□□□□ -0.33
TCOF1-201ENST00000323668 PTCRAQ6ISU1 281 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms