RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 ROBO4Q8WZ75 1007 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 SH2D2AQ9NP31 389 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 ICAM5Q9UMF0 924 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 B4GALT1P15291 398 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 C19orf43Q9BQ61 176 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 ADAMTS5Q9UNA0 930 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 BCL3P20749 454 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 ATP5SQ99766 215 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 OR51B4Q9Y5P0 310 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 COL16A1Q07092 1604 aaPredicted RBP15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 CACNA1IQ9P0X4 2223 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 H3BVH4 76 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 RBP4P02753 201 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 EMDP50402 254 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 DOLPP1Q86YN1 238 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 C16orf52Q8NHV5 167 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 ZNF646O15015 1829 aaPredicted RBP15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 SLC37A1P57057 533 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 COX19Q49B96 90 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 SPSB1Q96BD6 273 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 MARVELD1Q9BSK0 173 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 TMEM191AQ9H0A3 160 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 OR3A1P47881 315 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 KCNAB1Q14722 419 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 VN1R2Q8NFZ6 395 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 RAB24Q969Q5 203 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 DOK1Q99704 481 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 NEURL2Q9BR09 285 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 MS4A18H0YCH9 400 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 CRYAAP02489 173 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 MS4A18Q3C1V0 323 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 OR1L3Q8NH93 324 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 KLK8O60259 260 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 TIAL1Q01085 375 aaKnown RBP eCLIP15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 GUCA2AQ02747 115 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 FAM27D1Q5T7N8 215 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 TSPAN12O95859 305 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 IGHA1P01876 353 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 IGHA2P01877 340 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 INHBBP09529 407 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 OR1L4Q8NGR5 311 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 SIGLEC11Q96RL6 698 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 IDSB3KWA1 339 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 PRDX4Q13162 271 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 PPP1R1AQ13522 171 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 Q3ZCU0 254 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 FAHD2BQ6P2I3 314 aaPredicted RBP15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 PAQR9Q6ZVX9 377 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 BAHD1Q8TBE0 780 aaPredicted RBP15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 FAHD2AQ96GK7 314 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 LTB4R2Q9NPC1 389 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 CDRT15L2A8MXV6 281 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 PLPP2O43688 288 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 VASH2Q86V25 355 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 SLC22A13Q9Y226 551 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 SIT1Q9Y3P8 196 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 A4GNTQ9UNA3 340 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 KIAA2026Q5HYC2 2103 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 FGF17O60258 216 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 SLC6A1P30531 599 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 ACVR1Q04771 509 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 Q56UQ5 140 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 Q7L0L9 218 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 NRG2O14511 850 aaPredicted RBP15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 SPRY1O43609 319 aaPredicted RBP15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 BSGP35613 385 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 CEACAM6P40199 344 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 CRYBB2P43320 205 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 CDC34P49427 236 aaPredicted RBP15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 LSM11P83369 360 aaKnown RBP eCLIP15.15■□□□□ 0.028e-8■■■■■ 38.9
SMCHD1-201ENST00000320876 LILRA3Q8N6C8 439 aaPredicted RBP15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 MISP3Q96FF7 219 aa15.15■□□□□ 0.02
SMCHD1-201ENST00000320876 KLF13Q9Y2Y9 288 aaPredicted RBP15.14■□□□□ 0.01
SMCHD1-201ENST00000320876 ATP6V1FQ16864 119 aa15.14■□□□□ 0.01
SMCHD1-201ENST00000320876 CRISP2P16562 243 aa15.14■□□□□ 0.01
SMCHD1-201ENST00000320876 SUMO3P55854 103 aaPredicted RBP15.14■□□□□ 0.01
SMCHD1-201ENST00000320876 INSM1Q01101 510 aaPredicted RBP15.14■□□□□ 0.01
SMCHD1-201ENST00000320876 TMEM215Q68D42 235 aa15.14■□□□□ 0.01
SMCHD1-201ENST00000320876 NAA60Q9H7X0 242 aa15.14■□□□□ 0.01
SMCHD1-201ENST00000320876 SIRT7Q9NRC8 400 aa15.14■□□□□ 0.01
SMCHD1-201ENST00000320876 PCDHGA9Q9Y5G4 932 aaKnown RBP15.14■□□□□ 0.01
SMCHD1-201ENST00000320876 F5H697 171 aa15.14■□□□□ 0.01
SMCHD1-201ENST00000320876 SPINK4O60575 86 aa15.14■□□□□ 0.01
SMCHD1-201ENST00000320876 PCBP3P57721 371 aaKnown RBP15.14■□□□□ 0.01
SMCHD1-201ENST00000320876 PPIAP62937 165 aaKnown RBP15.14■□□□□ 0.01
SMCHD1-201ENST00000320876 FAM78BQ5VT40 261 aa15.14■□□□□ 0.01
SMCHD1-201ENST00000320876 MVB12AQ96EY5 273 aa15.14■□□□□ 0.01
SMCHD1-201ENST00000320876 SLC25A1P53007 311 aa15.14■□□□□ 0.01
SMCHD1-201ENST00000320876 PNLIPRP2P54317 469 aa15.14■□□□□ 0.01
SMCHD1-201ENST00000320876 PPP1CAP62136 330 aa15.14■□□□□ 0.01
SMCHD1-201ENST00000320876 FREM3P0C091 2139 aa15.14■□□□□ 0.01
SMCHD1-201ENST00000320876 CTAG2O75638 210 aa15.14■□□□□ 0.01
SMCHD1-201ENST00000320876 WNT1P04628 370 aa15.14■□□□□ 0.01
SMCHD1-201ENST00000320876 OR1F12Q8NHA8 337 aa15.14■□□□□ 0.01
SMCHD1-201ENST00000320876 MTFP1Q9UDX5 166 aa15.14■□□□□ 0.01
SMCHD1-201ENST00000320876 MASP2O00187 686 aa15.14■□□□□ 0.01
SMCHD1-201ENST00000320876 PRRG2O14669 202 aa15.14■□□□□ 0.01
SMCHD1-201ENST00000320876 IL2RAP01589 272 aa15.14■□□□□ 0.01
SMCHD1-201ENST00000320876 RPS4Y1P22090 263 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms