RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 ACTBP60709 375 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 ACTG1P63261 375 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 PPA1Q15181 289 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 PCGF3Q3KNV8 242 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 SEZ6L2Q6UXD5 910 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 TMEM200AQ86VY9 491 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 ZNF611Q8N823 705 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 CHAC2Q8WUX2 184 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 RND1Q92730 232 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 CREB3L1Q96BA8 519 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 UPRTQ96BW1 309 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 POM121Q96HA1 1249 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 OR10A4Q9H209 315 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 DPAGT1Q9H3H5 408 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 COPZ2Q9P299 210 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 AKR7A2O43488 359 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 HTR3BO95264 441 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 MPV17P39210 176 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 ZNF83P51522 516 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 GPM6AP51674 278 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 PNLIPRP3Q17RR3 467 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 RTN4RL2Q86UN3 420 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 FJX1Q86VR8 437 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 TMEM229BQ8NBD8 167 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 OR51F2Q8NH61 342 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 PPP1R14BQ96C90 147 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 NEURL2Q9BR09 285 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 CACNG6Q9BXT2 260 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 PCDHB16Q9NRJ7 776 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 NOP16Q9Y3C1 178 aaKnown RBP14.01□□□□□ -0.17
TPM1-201ENST00000267996 PCNX1Q96RV3 2341 aa14□□□□□ -0.17
TPM1-201ENST00000267996 MEIS3P1A6NDR6 274 aa14□□□□□ -0.17
TPM1-201ENST00000267996 C16orf97H3BN30 126 aa14□□□□□ -0.17
TPM1-201ENST00000267996 SSX5O60225 188 aa14□□□□□ -0.17
TPM1-201ENST00000267996 PLATP00750 562 aa14□□□□□ -0.17
TPM1-201ENST00000267996 CSTBP04080 98 aaKnown RBP14□□□□□ -0.17
TPM1-201ENST00000267996 KITLGP21583 273 aa14□□□□□ -0.17
TPM1-201ENST00000267996 CA6P23280 308 aa14□□□□□ -0.17
TPM1-201ENST00000267996 GIFP27352 417 aa14□□□□□ -0.17
TPM1-201ENST00000267996 CASP6P55212 293 aa14□□□□□ -0.17
TPM1-201ENST00000267996 BTG1P62324 171 aa14□□□□□ -0.17
TPM1-201ENST00000267996 GNG3P63215 75 aa14□□□□□ -0.17
TPM1-201ENST00000267996 ALKBH6Q3KRA9 238 aa14□□□□□ -0.17
TPM1-201ENST00000267996 MBNL2Q5VZF2 373 aaKnown RBP14□□□□□ -0.17
TPM1-201ENST00000267996 SLC25A26Q70HW3 274 aa14□□□□□ -0.17
TPM1-201ENST00000267996 ST8SIA4Q92187 359 aa14□□□□□ -0.17
TPM1-201ENST00000267996 DVL3Q92997 716 aaPredicted RBP14□□□□□ -0.17
TPM1-201ENST00000267996 ARHGAP5-AS1Q96IT6 56 aa14□□□□□ -0.17
TPM1-201ENST00000267996 ANAPC10Q9UM13 185 aa14□□□□□ -0.17
TPM1-201ENST00000267996 NUBP2Q9Y5Y2 271 aa14□□□□□ -0.17
TPM1-201ENST00000267996 HEATR1Q9H583 2144 aaKnown RBP13.99□□□□□ -0.17
TPM1-201ENST00000267996 A0A0B4J293 547 aa13.99□□□□□ -0.17
TPM1-201ENST00000267996 TRGV8A0A0C4DH27 118 aa13.99□□□□□ -0.17
TPM1-201ENST00000267996 CA11O75493 328 aa13.99□□□□□ -0.17
TPM1-201ENST00000267996 TCRBP04435 133 aa13.99□□□□□ -0.17
TPM1-201ENST00000267996 SFTPBP07988 381 aa13.99□□□□□ -0.17
TPM1-201ENST00000267996 BLVRBP30043 206 aaPredicted RBP13.99□□□□□ -0.17
TPM1-201ENST00000267996 RCVRNP35243 200 aa13.99□□□□□ -0.17
TPM1-201ENST00000267996 FAM76BQ5HYJ3 339 aa13.99□□□□□ -0.17
TPM1-201ENST00000267996 AGAP6Q5VW22 663 aa13.99□□□□□ -0.17
TPM1-201ENST00000267996 ELP2Q6IA86 826 aa13.99□□□□□ -0.17
TPM1-201ENST00000267996 PCSK4Q6UW60 755 aa13.99□□□□□ -0.17
TPM1-201ENST00000267996 C22orf34Q6ZV56 151 aa13.99□□□□□ -0.17
TPM1-201ENST00000267996 OSR2Q8N2R0 312 aa13.99□□□□□ -0.17
TPM1-201ENST00000267996 PURGQ9UJV8 347 aaKnown RBP13.99□□□□□ -0.17
TPM1-201ENST00000267996 AKAIN1P0CW23 69 aa13.98□□□□□ -0.17
TPM1-201ENST00000267996 MPZP25189 248 aa13.98□□□□□ -0.17
TPM1-201ENST00000267996 FAUP35544 74 aaKnown RBP13.98□□□□□ -0.17
TPM1-201ENST00000267996 HAAOP46952 286 aa13.98□□□□□ -0.17
TPM1-201ENST00000267996 CCR6P51684 374 aa13.98□□□□□ -0.17
TPM1-201ENST00000267996 TAS2R19P59542 299 aa13.98□□□□□ -0.17
TPM1-201ENST00000267996 ARL6IP1Q15041 203 aa13.98□□□□□ -0.17
TPM1-201ENST00000267996 ZNF718Q3SXZ3 478 aa13.98□□□□□ -0.17
TPM1-201ENST00000267996 RSBN1Q5VWQ0 802 aaPredicted RBP13.98□□□□□ -0.17
TPM1-201ENST00000267996 SIGIRRQ6IA17 410 aa13.98□□□□□ -0.17
TPM1-201ENST00000267996 BTN2A1Q7KYR7 527 aa13.98□□□□□ -0.17
TPM1-201ENST00000267996 TRAPPC6BQ86SZ2 158 aa13.98□□□□□ -0.17
TPM1-201ENST00000267996 ZNF573Q86YE8 665 aa13.98□□□□□ -0.17
TPM1-201ENST00000267996 OR4C16Q8NGL9 310 aa13.98□□□□□ -0.17
TPM1-201ENST00000267996 NUDCD2Q8WVJ2 157 aa13.98□□□□□ -0.17
TPM1-201ENST00000267996 MICU1Q9BPX6 476 aa13.98□□□□□ -0.17
TPM1-201ENST00000267996 PECRQ9BY49 303 aa13.98□□□□□ -0.17
TPM1-201ENST00000267996 PKIBQ9C010 78 aa13.98□□□□□ -0.17
TPM1-201ENST00000267996 OR51I2Q9H344 312 aa13.98□□□□□ -0.17
TPM1-201ENST00000267996 HSF4Q9ULV5 492 aa13.98□□□□□ -0.17
TPM1-201ENST00000267996 A0A1B0GWJ7 208 aa13.98□□□□□ -0.17
TPM1-201ENST00000267996 INMT-MINDY4F8WBC2 141 aa13.98□□□□□ -0.17
TPM1-201ENST00000267996 M0R1B8 84 aa13.98□□□□□ -0.17
TPM1-201ENST00000267996 ERVH48-1M5A8F1 160 aa13.98□□□□□ -0.17
TPM1-201ENST00000267996 CD74P04233 296 aa13.98□□□□□ -0.17
TPM1-201ENST00000267996 RAG2P55895 527 aa13.98□□□□□ -0.17
TPM1-201ENST00000267996 NKX6-1P78426 367 aaPredicted RBP13.98□□□□□ -0.17
TPM1-201ENST00000267996 LY6DQ14210 128 aa13.98□□□□□ -0.17
TPM1-201ENST00000267996 STEAP1BQ6NZ63 245 aa13.98□□□□□ -0.17
TPM1-201ENST00000267996 SSX8Q7RTT4 187 aa13.98□□□□□ -0.17
TPM1-201ENST00000267996 PKD1L2Q7Z442 2459 aa13.98□□□□□ -0.17
TPM1-201ENST00000267996 MKXQ8IYA7 352 aa13.98□□□□□ -0.17
TPM1-201ENST00000267996 FBXL14Q8N1E6 418 aa13.98□□□□□ -0.17
TPM1-201ENST00000267996 OR8G5Q8NG78 346 aa13.98□□□□□ -0.17
TPM1-201ENST00000267996 TPRP12270 2363 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms