RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 HLA-DOBP13765 273 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 FGF7P21781 194 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 MESTQ5EB52 335 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 ATG4DQ86TL0 474 aaPredicted RBP10.28□□□□□ -0.76
VPS33A-201ENST00000267199 YRDCQ86U90 279 aaKnown RBP10.28□□□□□ -0.76
VPS33A-201ENST00000267199 ARHGEF39Q8N4T4 335 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 FAM210BQ96KR6 192 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 RYDENQ9NUL5 291 aaKnown RBP10.28□□□□□ -0.76
VPS33A-201ENST00000267199 ICAM5Q9UMF0 924 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 VSIG4Q9Y279 399 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 HPP00738 406 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 NTF3P20783 257 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 RPS16P62249 146 aaKnown RBP10.28□□□□□ -0.76
VPS33A-201ENST00000267199 DGAT2L6Q6ZPD8 337 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 DMBX1Q8NFW5 382 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 OR8U1Q8NH10 309 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 MRGPRX4Q96LA9 322 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 PCOLCE2Q9UKZ9 415 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 ZMIZ1Q9ULJ6 1067 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 PPP1R3CQ9UQK1 317 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 IGHV3-15A0A0B4J1V0 119 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 C4orf47A7E2U8 309 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 H0Y8G0 127 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 SLC25A42Q86VD7 318 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 OR5C1Q8NGR4 320 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 OR1L3Q8NH93 324 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 SNX22Q96L94 193 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 OR51I2Q9H344 312 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 SIT1Q9Y3P8 196 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 LIPGQ9Y5X9 500 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 ZNF320A2RRD8 509 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 PIN1P1O15428 100 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 FGF2P09038 288 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 SCAND1P57086 179 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 TMEM255AQ5JRV8 349 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 PTCRAQ6ISU1 281 aaPredicted RBP10.28□□□□□ -0.76
VPS33A-201ENST00000267199 TFAP2EQ6VUC0 442 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 SLC25A26Q70HW3 274 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 UBALD1Q8TB05 177 aa10.28□□□□□ -0.76
VPS33A-201ENST00000267199 NANOS1Q8WY41 292 aaKnown RBP10.28□□□□□ -0.76
VPS33A-201ENST00000267199 BOKQ9UMX3 212 aaPredicted RBP10.28□□□□□ -0.76
VPS33A-201ENST00000267199 A0A1W2PQF6 199 aa10.27□□□□□ -0.76
VPS33A-201ENST00000267199 SOX15O60248 233 aa10.27□□□□□ -0.76
VPS33A-201ENST00000267199 VAMP5O95183 116 aa10.27□□□□□ -0.76
VPS33A-201ENST00000267199 SRFP11831 508 aa10.27□□□□□ -0.76
VPS33A-201ENST00000267199 KISS1Q15726 138 aa10.27□□□□□ -0.76
VPS33A-201ENST00000267199 RABEPKQ7Z6M1 372 aa10.27□□□□□ -0.76
VPS33A-201ENST00000267199 FBXL14Q8N1E6 418 aa10.27□□□□□ -0.76
VPS33A-201ENST00000267199 OXGR1Q96P68 337 aa10.27□□□□□ -0.76
VPS33A-201ENST00000267199 UHRF2Q96PU4 802 aa10.27□□□□□ -0.76
VPS33A-201ENST00000267199 FAAP24Q9BTP7 215 aa10.27□□□□□ -0.76
VPS33A-201ENST00000267199 ZNF275Q9NSD4 429 aaPredicted RBP10.27□□□□□ -0.76
VPS33A-201ENST00000267199 RPH3ALQ9UNE2 315 aa10.27□□□□□ -0.76
VPS33A-201ENST00000267199 NOSIPQ9Y314 301 aaKnown RBP10.27□□□□□ -0.76
VPS33A-201ENST00000267199 SERPINE3A8MV23 424 aa10.27□□□□□ -0.77
VPS33A-201ENST00000267199 OR5AC1P0C628 307 aa10.27□□□□□ -0.77
VPS33A-201ENST00000267199 GLULP15104 373 aa10.27□□□□□ -0.77
VPS33A-201ENST00000267199 MYBPHQ13203 477 aa10.27□□□□□ -0.77
VPS33A-201ENST00000267199 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.27□□□□□ -0.77
VPS33A-201ENST00000267199 PHF7Q9BWX1 381 aaPredicted RBP10.27□□□□□ -0.77
VPS33A-201ENST00000267199 CFHR5Q9BXR6 569 aa10.27□□□□□ -0.77
VPS33A-201ENST00000267199 CALHM2Q9HA72 323 aa10.27□□□□□ -0.77
VPS33A-201ENST00000267199 CLDN34H7C241 214 aa10.27□□□□□ -0.77
VPS33A-201ENST00000267199 IGKV1D-16P01601 117 aa10.27□□□□□ -0.77
VPS33A-201ENST00000267199 GPR3P46089 330 aa10.27□□□□□ -0.77
VPS33A-201ENST00000267199 LIMK1P53667 647 aa10.27□□□□□ -0.77
VPS33A-201ENST00000267199 CATR1Q13166 79 aa10.27□□□□□ -0.77
VPS33A-201ENST00000267199 LRP11Q86VZ4 500 aa10.27□□□□□ -0.77
VPS33A-201ENST00000267199 OR10J5Q8NHC4 309 aa10.27□□□□□ -0.77
VPS33A-201ENST00000267199 BORCS7Q96B45 105 aa10.27□□□□□ -0.77
VPS33A-201ENST00000267199 HEYLQ9NQ87 328 aaPredicted RBP10.27□□□□□ -0.77
VPS33A-201ENST00000267199 DNAJB11Q9UBS4 358 aa10.27□□□□□ -0.77
VPS33A-201ENST00000267199 ANKUB1A6NFN9 424 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 FIGNL2A6NMB9 653 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 MMP7P09237 267 aaPredicted RBP10.26□□□□□ -0.77
VPS33A-201ENST00000267199 MDKP21741 143 aaPredicted RBP10.26□□□□□ -0.77
VPS33A-201ENST00000267199 UBE2G2P60604 165 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 PNLIPRP3Q17RR3 467 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 NR2C2APQ86WQ0 139 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 ROBO4Q8WZ75 1007 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 PLEKHF2Q9H8W4 249 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 KCNE5Q9UJ90 142 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 ICE1Q9Y2F5 2266 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 EIF3GO75821 320 aaKnown RBP eCLIP10.26□□□□□ -0.77
VPS33A-201ENST00000267199 C1QL1O75973 258 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 ENDOGQ14249 297 aaKnown RBP10.26□□□□□ -0.77
VPS33A-201ENST00000267199 SYT13Q7L8C5 426 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 GLRX5Q86SX6 157 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 ASB5Q8WWX0 329 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 OBP2BQ9NPH6 170 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 ARHGEF17Q96PE2 2063 aaPredicted RBP10.26□□□□□ -0.77
VPS33A-201ENST00000267199 HEATR5BQ9P2D3 2071 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 KIR2DS1A0A191URI9 304 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 C17orf112F2Z3M2 114 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 PIAS2O75928 621 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 EPPINO95925 133 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 NRASP01111 189 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 TCN2P20062 427 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 KIR2DS4P43632 304 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 NOVA1P51513 510 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms