RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 PRSS3P35030 304 aa19.53■□□□□ 0.72
SMARCB1-201ENST00000263121 CDSNQ15517 529 aa19.53■□□□□ 0.72
SMARCB1-201ENST00000263121 TMEM200AQ86VY9 491 aa19.53■□□□□ 0.72
SMARCB1-201ENST00000263121 ZNF573Q86YE8 665 aa19.53■□□□□ 0.72
SMARCB1-201ENST00000263121 OR51T1Q8NGJ9 327 aa19.53■□□□□ 0.72
SMARCB1-201ENST00000263121 OR8S1Q8NH09 359 aa19.53■□□□□ 0.72
SMARCB1-201ENST00000263121 TMEM171Q8WVE6 324 aa19.53■□□□□ 0.72
SMARCB1-201ENST00000263121 Q96M66 194 aa19.53■□□□□ 0.72
SMARCB1-201ENST00000263121 HEATR1Q9H583 2144 aaKnown RBP19.53■□□□□ 0.72
SMARCB1-201ENST00000263121 USP24Q9UPU5 2620 aa19.53■□□□□ 0.72
SMARCB1-201ENST00000263121 SOCS1O15524 211 aa19.52■□□□□ 0.72
SMARCB1-201ENST00000263121 CSTBP04080 98 aaKnown RBP19.52■□□□□ 0.72
SMARCB1-201ENST00000263121 GTF2F2P13984 249 aa19.52■□□□□ 0.72
SMARCB1-201ENST00000263121 SRP9P49458 86 aaKnown RBP19.52■□□□□ 0.72
SMARCB1-201ENST00000263121 RPS23P62266 143 aaKnown RBP19.52■□□□□ 0.72
SMARCB1-201ENST00000263121 FAM76BQ5HYJ3 339 aa19.52■□□□□ 0.72
SMARCB1-201ENST00000263121 Q8NFD4 153 aa19.52■□□□□ 0.72
SMARCB1-201ENST00000263121 NUP37Q8NFH4 326 aa19.52■□□□□ 0.72
SMARCB1-201ENST00000263121 SLC22A4Q9H015 551 aa19.52■□□□□ 0.72
SMARCB1-201ENST00000263121 OR51I2Q9H344 312 aa19.52■□□□□ 0.72
SMARCB1-201ENST00000263121 TMEM100Q9NV29 134 aa19.52■□□□□ 0.72
SMARCB1-201ENST00000263121 KLK11Q9UBX7 282 aa19.52■□□□□ 0.72
SMARCB1-201ENST00000263121 H7C417 338 aa19.52■□□□□ 0.71
SMARCB1-201ENST00000263121 SULT1C2O00338 296 aa19.52■□□□□ 0.71
SMARCB1-201ENST00000263121 SFTPBP07988 381 aa19.52■□□□□ 0.71
SMARCB1-201ENST00000263121 MELTFP08582 738 aa19.52■□□□□ 0.71
SMARCB1-201ENST00000263121 SPNP16150 400 aa19.52■□□□□ 0.71
SMARCB1-201ENST00000263121 CPT2P23786 658 aa19.52■□□□□ 0.71
SMARCB1-201ENST00000263121 TMEM50BP56557 158 aa19.52■□□□□ 0.71
SMARCB1-201ENST00000263121 GUCA2AQ02747 115 aa19.52■□□□□ 0.71
SMARCB1-201ENST00000263121 KLF9Q13886 244 aaPredicted RBP19.52■□□□□ 0.71
SMARCB1-201ENST00000263121 NRARPQ7Z6K4 114 aa19.52■□□□□ 0.71
SMARCB1-201ENST00000263121 WDR86Q86TI4 376 aa19.52■□□□□ 0.71
SMARCB1-201ENST00000263121 TOMM5Q8N4H5 51 aa19.52■□□□□ 0.71
SMARCB1-201ENST00000263121 CHST4Q8NCG5 386 aa19.52■□□□□ 0.71
SMARCB1-201ENST00000263121 PRR7Q8TB68 274 aa19.52■□□□□ 0.71
SMARCB1-201ENST00000263121 GPX8Q8TED1 209 aa19.52■□□□□ 0.71
SMARCB1-201ENST00000263121 CA5BP1Q8WTZ4 195 aa19.52■□□□□ 0.71
SMARCB1-201ENST00000263121 MRPS24Q96EL2 167 aaKnown RBP19.52■□□□□ 0.71
SMARCB1-201ENST00000263121 RADILQ96JH8 1075 aa19.52■□□□□ 0.71
SMARCB1-201ENST00000263121 COX4I2Q96KJ9 171 aa19.52■□□□□ 0.71
SMARCB1-201ENST00000263121 PKIBQ9C010 78 aa19.52■□□□□ 0.71
SMARCB1-201ENST00000263121 ZMAT3Q9HA38 289 aaKnown RBP19.52■□□□□ 0.71
SMARCB1-201ENST00000263121 SCPEP1Q9HB40 452 aa19.52■□□□□ 0.71
SMARCB1-201ENST00000263121 MTFP1Q9UDX5 166 aa19.52■□□□□ 0.71
SMARCB1-201ENST00000263121 COL6A6A6NMZ7 2263 aa19.51■□□□□ 0.71
SMARCB1-201ENST00000263121 MLNRO43193 412 aa19.51■□□□□ 0.71
SMARCB1-201ENST00000263121 LYRM1O43325 122 aa19.51■□□□□ 0.71
SMARCB1-201ENST00000263121 IGHV3-13P01766 116 aa19.51■□□□□ 0.71
SMARCB1-201ENST00000263121 GNLYP22749 145 aa19.51■□□□□ 0.71
SMARCB1-201ENST00000263121 MPZP25189 248 aa19.51■□□□□ 0.71
SMARCB1-201ENST00000263121 UQCRFS1P47985 274 aa19.51■□□□□ 0.71
SMARCB1-201ENST00000263121 BSPH1Q075Z2 132 aa19.51■□□□□ 0.71
SMARCB1-201ENST00000263121 OR8G1Q15617 311 aa19.51■□□□□ 0.71
SMARCB1-201ENST00000263121 IGFBP7Q16270 282 aa19.51■□□□□ 0.71
SMARCB1-201ENST00000263121 CDNFQ49AH0 187 aa19.51■□□□□ 0.71
SMARCB1-201ENST00000263121 C4orf17Q53FE4 359 aa19.51■□□□□ 0.71
SMARCB1-201ENST00000263121 PLAC9Q5JTB6 97 aa19.51■□□□□ 0.71
SMARCB1-201ENST00000263121 Q6ZR03 302 aa19.51■□□□□ 0.71
SMARCB1-201ENST00000263121 Q6ZTK2 550 aa19.51■□□□□ 0.71
SMARCB1-201ENST00000263121 MKXQ8IYA7 352 aa19.51■□□□□ 0.71
SMARCB1-201ENST00000263121 SEH1LQ96EE3 360 aa19.51■□□□□ 0.71
SMARCB1-201ENST00000263121 NGBQ9NPG2 151 aa19.51■□□□□ 0.71
SMARCB1-201ENST00000263121 PCDHB16Q9NRJ7 776 aa19.51■□□□□ 0.71
SMARCB1-201ENST00000263121 ELF5Q9UKW6 265 aaPredicted RBP19.51■□□□□ 0.71
SMARCB1-201ENST00000263121 IGLV3-9A0A075B6K5 115 aa19.5■□□□□ 0.71
SMARCB1-201ENST00000263121 TMEM235A6NFC5 223 aa19.5■□□□□ 0.71
SMARCB1-201ENST00000263121 H0YL77 283 aa19.5■□□□□ 0.71
SMARCB1-201ENST00000263121 SORDQ00796 357 aa19.5■□□□□ 0.71
SMARCB1-201ENST00000263121 TLE1Q04724 770 aa19.5■□□□□ 0.71
SMARCB1-201ENST00000263121 HAGHLQ6PII5 290 aaPredicted RBP19.5■□□□□ 0.71
SMARCB1-201ENST00000263121 RTN4RL2Q86UN3 420 aa19.5■□□□□ 0.71
SMARCB1-201ENST00000263121 LRP11Q86VZ4 500 aa19.5■□□□□ 0.71
SMARCB1-201ENST00000263121 OSR2Q8N2R0 312 aa19.5■□□□□ 0.71
SMARCB1-201ENST00000263121 RAB3CQ96E17 227 aa19.5■□□□□ 0.71
SMARCB1-201ENST00000263121 LRRC46Q96FV0 321 aa19.5■□□□□ 0.71
SMARCB1-201ENST00000263121 LRP5LA4QPB2 252 aa19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 ABCD4O14678 606 aa19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 LPLP06858 475 aa19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 GSTP1P09211 210 aaKnown RBP19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 HIST1H1DP16402 221 aaKnown RBP19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 GNB3P16520 340 aa19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 NPBWR2P48146 333 aa19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 IL24Q13007 206 aa19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 DYRK1AQ13627 763 aa19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 ELP2Q6IA86 826 aa19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 MZT2BQ6NZ67 158 aa19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 PIAS4Q8N2W9 510 aaPredicted RBP19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 SLAMF9Q96A28 289 aa19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 KCNJ16Q9NPI9 418 aa19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 RBFOX1Q9NWB1 397 aaKnown RBP19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 MTCH1Q9NZJ7 389 aa19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 KCNK7Q9Y2U2 307 aa19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 CACNG2Q9Y698 323 aa19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 ANKRD20A5PA0PJZ0 165 aa19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 TMEM210A6NLX4 147 aa19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 J3QT63 122 aa19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 MFNGO00587 321 aa19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 AKR7A2O43488 359 aa19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 SYNGR1O43759 233 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms