RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 JTBO76095 146 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 MUC1P15941 1255 aaPredicted RBP6.73□□□□□ -1.33
RIF1-201ENST00000243326 GPR87Q9BY21 358 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 ARHGAP32A7KAX9 2087 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 PTGFRP43088 359 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 THBS3P49746 956 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 CASP6P55212 293 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 OR5I1Q13606 314 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 DOK3Q7L591 496 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 ZPLD1Q8TCW7 415 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 BARX1Q9HBU1 254 aaPredicted RBP6.73□□□□□ -1.33
RIF1-201ENST00000243326 KLK8O60259 260 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 SULT1A2P50226 295 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 C17orf67Q0P5P2 114 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 ZAR1Q86SH2 424 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 TWSG1Q9GZX9 223 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 SHARPINQ9H0F6 387 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 TMEM140Q9NV12 185 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 SERGEFQ9UGK8 458 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 R4GMQ9 66 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 LINC01553A4QN01 128 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 AP4M1O00189 453 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 TPPP2P59282 170 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 OR1A1Q9P1Q5 309 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 GATCO43716 136 aaKnown RBP6.73□□□□□ -1.33
RIF1-201ENST00000243326 DLK1P80370 383 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 MRPL24Q96A35 216 aaKnown RBP6.73□□□□□ -1.33
RIF1-201ENST00000243326 TSPAN32Q96QS1 320 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 FSCN3Q9NQT6 498 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 ARFGEF1Q9Y6D6 1849 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 RNF212BA8MTL3 300 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 GPA33Q99795 319 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 LAMTOR5O43504 91 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 DTYMKP23919 212 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 LBX1P52954 281 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 C1QL3Q5VWW1 255 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 ZNF574Q6ZN55 896 aaPredicted RBP6.72□□□□□ -1.33
RIF1-201ENST00000243326 WFDC6Q9BQY6 131 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 FGF21Q9NSA1 209 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 ZNF814B7Z6K7 855 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 SPINT2O43291 252 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 COMPP49747 757 aaPredicted RBP6.72□□□□□ -1.33
RIF1-201ENST00000243326 ZNF137PP52743 207 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 PPIAP62937 165 aaKnown RBP6.72□□□□□ -1.33
RIF1-201ENST00000243326 SFTPA2Q8IWL1 248 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 WNT11O96014 354 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 SULT1A1P50225 295 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 ZNF77Q15935 545 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 MPV17LQ2QL34 196 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 TFAP2EQ6VUC0 442 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 TMEM91Q6ZNR0 172 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 OR11H4Q8NGC9 324 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 KCNE1BA0A087WTH5 132 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 TMSB15BA0A087X1C1 80 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 SFT2D2O95562 160 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 FCRL6Q6DN72 434 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 EXTL1Q92935 676 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 ADIPOR1Q96A54 375 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 KIR2DS5A0A0G2JLQ3 304 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 A0A0G2JNG1 304 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 OR5K3A6NET4 321 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 RBFOX3A6NFN3 312 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 DBX1A6NMT0 343 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 KIR2DS3K7RE56 304 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 MPC2O95563 127 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 PEX11BO96011 259 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 TCN2P20062 427 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 RBP2P50120 134 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 KIR2DS5Q14953 304 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 LYSMD4Q5XG99 296 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 PRSS53Q2L4Q9 553 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 RTL6Q6ICC9 239 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 NAT8BQ9UHF3 227 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 C7orf77A4D0Y5 90 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 SSUH2Q9Y2M2 353 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 KLHDC2Q9Y2U9 406 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 NOVA1P51513 510 aaKnown RBP6.72□□□□□ -1.33
RIF1-201ENST00000243326 MRPL43Q8N983 215 aaKnown RBP6.72□□□□□ -1.33
RIF1-201ENST00000243326 TRIB1Q96RU8 372 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 PRRX2Q99811 253 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 PHF3Q92576 2039 aaKnown RBP6.72□□□□□ -1.33
RIF1-201ENST00000243326 FAM3AP98173 230 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 ZNF774Q6NX45 483 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 OSR2Q8N2R0 312 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 BTAF1O14981 1849 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 CDK5Q00535 292 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 ACVR1Q04771 509 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 MGAT2Q10469 447 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 OR11L1Q8NGX0 322 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 PACRGQ96M98 296 aaPredicted RBP6.72□□□□□ -1.33
RIF1-201ENST00000243326 SRD5A3Q9H8P0 318 aa6.72□□□□□ -1.33
RIF1-201ENST00000243326 ANKRD20A5PA0PJZ0 165 aa6.71□□□□□ -1.33
RIF1-201ENST00000243326 TNFRSF10CO14798 259 aa6.71□□□□□ -1.33
RIF1-201ENST00000243326 CHRM2P08172 466 aa6.71□□□□□ -1.33
RIF1-201ENST00000243326 NKAIN3Q8N8D7 197 aa6.71□□□□□ -1.33
RIF1-201ENST00000243326 GPX8Q8TED1 209 aa6.71□□□□□ -1.33
RIF1-201ENST00000243326 GPR137Q96N19 417 aa6.71□□□□□ -1.33
RIF1-201ENST00000243326 SLC17A2O00624 439 aa6.71□□□□□ -1.33
RIF1-201ENST00000243326 ZNF737O75373 536 aa6.71□□□□□ -1.33
RIF1-201ENST00000243326 ZNF117Q03924 483 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms