RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 Q96M66 194 aa13.03□□□□□ -0.32
HDHD3-201ENST00000238379 BCL2L14Q9BZR8 327 aa13.03□□□□□ -0.32
HDHD3-201ENST00000238379 TAS2R8Q9NYW2 309 aa13.03□□□□□ -0.32
HDHD3-201ENST00000238379 KCNK7Q9Y2U2 307 aa13.03□□□□□ -0.32
HDHD3-201ENST00000238379 C16orf97H3BN30 126 aa13.02□□□□□ -0.32
HDHD3-201ENST00000238379 M0R1B8 84 aa13.02□□□□□ -0.32
HDHD3-201ENST00000238379 HTR3BO95264 441 aa13.02□□□□□ -0.32
HDHD3-201ENST00000238379 CSTBP04080 98 aaKnown RBP13.02□□□□□ -0.32
HDHD3-201ENST00000238379 GTF2F2P13984 249 aa13.02□□□□□ -0.32
HDHD3-201ENST00000238379 HIST1H1DP16402 221 aaKnown RBP13.02□□□□□ -0.32
HDHD3-201ENST00000238379 CPT2P23786 658 aa13.02□□□□□ -0.32
HDHD3-201ENST00000238379 PCGF3Q3KNV8 242 aa13.02□□□□□ -0.32
HDHD3-201ENST00000238379 SLC25A26Q70HW3 274 aa13.02□□□□□ -0.32
HDHD3-201ENST00000238379 UPRTQ96BW1 309 aa13.02□□□□□ -0.32
HDHD3-201ENST00000238379 USB1Q9BQ65 265 aaKnown RBP13.02□□□□□ -0.32
HDHD3-201ENST00000238379 MARVELD1Q9BSK0 173 aa13.02□□□□□ -0.32
HDHD3-201ENST00000238379 OR5B21A6NL26 309 aa13.02□□□□□ -0.33
HDHD3-201ENST00000238379 SFTPBP07988 381 aa13.02□□□□□ -0.33
HDHD3-201ENST00000238379 GSTP1P09211 210 aaKnown RBP13.02□□□□□ -0.33
HDHD3-201ENST00000238379 CSF1P09603 554 aa13.02□□□□□ -0.33
HDHD3-201ENST00000238379 SELEP16581 610 aa13.02□□□□□ -0.33
HDHD3-201ENST00000238379 GIFP27352 417 aa13.02□□□□□ -0.33
HDHD3-201ENST00000238379 HAAOP46952 286 aa13.02□□□□□ -0.33
HDHD3-201ENST00000238379 CASP6P55212 293 aa13.02□□□□□ -0.33
HDHD3-201ENST00000238379 ACTBP60709 375 aa13.02□□□□□ -0.33
HDHD3-201ENST00000238379 ACTG1P63261 375 aa13.02□□□□□ -0.33
HDHD3-201ENST00000238379 OLFML2AQ68BL7 652 aa13.02□□□□□ -0.33
HDHD3-201ENST00000238379 ALKBH2Q6NS38 261 aa13.02□□□□□ -0.33
HDHD3-201ENST00000238379 FJX1Q86VR8 437 aa13.02□□□□□ -0.33
HDHD3-201ENST00000238379 C1orf174Q8IYL3 243 aa13.02□□□□□ -0.33
HDHD3-201ENST00000238379 Q8NFD4 153 aa13.02□□□□□ -0.33
HDHD3-201ENST00000238379 DEDD2Q8WXF8 326 aa13.02□□□□□ -0.33
HDHD3-201ENST00000238379 ARHGAP5-AS1Q96IT6 56 aa13.02□□□□□ -0.33
HDHD3-201ENST00000238379 CYYR1Q96J86 154 aa13.02□□□□□ -0.33
HDHD3-201ENST00000238379 CACNG6Q9BXT2 260 aa13.02□□□□□ -0.33
HDHD3-201ENST00000238379 DPAGT1Q9H3H5 408 aa13.02□□□□□ -0.33
HDHD3-201ENST00000238379 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.02□□□□□ -0.33
HDHD3-201ENST00000238379 NAP1L6A6NFF2 107 aa13.01□□□□□ -0.33
HDHD3-201ENST00000238379 MFNGO00587 321 aa13.01□□□□□ -0.33
HDHD3-201ENST00000238379 BLVRBP30043 206 aaPredicted RBP13.01□□□□□ -0.33
HDHD3-201ENST00000238379 CCR6P51684 374 aa13.01□□□□□ -0.33
HDHD3-201ENST00000238379 TMEM200AQ86VY9 491 aa13.01□□□□□ -0.33
HDHD3-201ENST00000238379 SAXO1Q8IYX7 474 aa13.01□□□□□ -0.33
HDHD3-201ENST00000238379 MRPS24Q96EL2 167 aaKnown RBP13.01□□□□□ -0.33
HDHD3-201ENST00000238379 NBEAQ8NFP9 2946 aa13□□□□□ -0.33
HDHD3-201ENST00000238379 A0A0B4J293 547 aa13□□□□□ -0.33
HDHD3-201ENST00000238379 SSX5O60225 188 aa13□□□□□ -0.33
HDHD3-201ENST00000238379 TCRBP04435 133 aa13□□□□□ -0.33
HDHD3-201ENST00000238379 FCER2P06734 321 aa13□□□□□ -0.33
HDHD3-201ENST00000238379 GNG3P63215 75 aa13□□□□□ -0.33
HDHD3-201ENST00000238379 FAAP20Q6NZ36 180 aa13□□□□□ -0.33
HDHD3-201ENST00000238379 OSR2Q8N2R0 312 aa13□□□□□ -0.33
HDHD3-201ENST00000238379 NUDCD2Q8WVJ2 157 aa13□□□□□ -0.33
HDHD3-201ENST00000238379 CREB3L1Q96BA8 519 aa13□□□□□ -0.33
HDHD3-201ENST00000238379 NEURL2Q9BR09 285 aa13□□□□□ -0.33
HDHD3-201ENST00000238379 PURGQ9UJV8 347 aaKnown RBP13□□□□□ -0.33
HDHD3-201ENST00000238379 HEATR1Q9H583 2144 aaKnown RBP13□□□□□ -0.33
HDHD3-201ENST00000238379 ERVH48-1M5A8F1 160 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 AKR7A2O43488 359 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 CRYAAP02489 173 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 CD3DP04234 171 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 KITLGP21583 273 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 GABRR1P24046 479 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 NPBWR2P48146 333 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 FABP6P51161 128 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 IGFBP7Q16270 282 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 TAF9Q16594 264 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 PNLIPRP3Q17RR3 467 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 ZNF718Q3SXZ3 478 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 RSBN1Q5VWQ0 802 aaPredicted RBP12.99□□□□□ -0.33
HDHD3-201ENST00000238379 MBNL2Q5VZF2 373 aaKnown RBP12.99□□□□□ -0.33
HDHD3-201ENST00000238379 SFRP4Q6FHJ7 346 aaPredicted RBP12.99□□□□□ -0.33
HDHD3-201ENST00000238379 SIGIRRQ6IA17 410 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 TRAPPC6BQ86SZ2 158 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 ZNF573Q86YE8 665 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 FBXL14Q8N1E6 418 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 TMEM229BQ8NBD8 167 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 OR10A4Q9H209 315 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 PCDHB16Q9NRJ7 776 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 COPZ2Q9P299 210 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 ZNF107Q9UII5 783 aaPredicted RBP12.99□□□□□ -0.33
HDHD3-201ENST00000238379 OSGIN2Q9Y236 505 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 ACACBO00763 2458 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 CADP27708 2225 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 CARTPTQ16568 116 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 PIGYQ3MUY2 71 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 FAM76BQ5HYJ3 339 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 HAGHLQ6PII5 290 aaPredicted RBP12.99□□□□□ -0.33
HDHD3-201ENST00000238379 MKXQ8IYA7 352 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 OR8G5Q8NG78 346 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 OR4D10Q8NGI6 311 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 OR4C16Q8NGL9 310 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 OR8S1Q8NH09 359 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 ST8SIA4Q92187 359 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 SLAMF9Q96A28 289 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 PECRQ9BY49 303 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 OR51I2Q9H344 312 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 MTCH1Q9NZJ7 389 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 ZNF581Q9P0T4 197 aa12.99□□□□□ -0.33
HDHD3-201ENST00000238379 NOP16Q9Y3C1 178 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms