RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 WDR38Q5JTN6 314 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 SLC35E3Q7Z769 313 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 MRPL43Q8N983 215 aaKnown RBP7.37□□□□□ -1.23
APOB-201ENST00000233242 KIF13BQ9NQT8 1826 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 OR5AC1P0C628 307 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 PPOXP50336 477 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 KIAA1456Q9P272 454 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 ADAM20O43506 726 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 SLC25A26Q70HW3 274 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 NUFIP2Q7Z417 695 aaKnown RBP7.37□□□□□ -1.23
APOB-201ENST00000233242 C10orf35Q96D05 121 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 SLC6A13Q9NSD5 602 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 SPTBN2O15020 2390 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 GUSBP08236 651 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 PTX4Q96A99 478 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 CD1AP06126 327 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 HEXAP06865 529 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 EDDM3AQ14507 147 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 PWWP2BQ6NUJ5 590 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 TRAT1Q6PIZ9 186 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 CNRIP1Q96F85 164 aaPredicted RBP7.37□□□□□ -1.23
APOB-201ENST00000233242 FGF21Q9NSA1 209 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 CDS2O95674 445 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 HOXB1P14653 301 aaPredicted RBP7.37□□□□□ -1.23
APOB-201ENST00000233242 CDC34P49427 236 aaPredicted RBP7.37□□□□□ -1.23
APOB-201ENST00000233242 PYCR3Q53H96 274 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 TMEM204Q9BSN7 226 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 ASCL1P50553 236 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 NKAIN2Q5VXU1 208 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 APOBEC3DQ96AK3 386 aaPredicted RBP7.37□□□□□ -1.23
APOB-201ENST00000233242 SERTM2A0A1B0GWG4 89 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 CLN3Q13286 438 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 ACY3Q96HD9 319 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 NRIP2Q9BQI9 281 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 KCNK15Q9H427 330 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 TRIM61Q5EBN2 209 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 C12orf54Q6X4T0 127 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 FBXL14Q8N1E6 418 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 C17orf47Q8NEP4 570 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 PHOSPHO2Q8TCD6 241 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 METTL1Q9UBP6 276 aaKnown RBP7.36□□□□□ -1.23
APOB-201ENST00000233242 TIMM9Q9Y5J7 89 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 TMEM265A0A087WTH1 108 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 KLRC4-KLRK1H3BQV0 150 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 ICOSLGO75144 302 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 CLEC12BQ2HXU8 276 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 ARHGAP5-AS1Q96IT6 56 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 TTRP02766 147 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 GJA4P35212 333 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 ERVS71-1P61550 626 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 AGERQ15109 404 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 FAM78BQ5VT40 261 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 ETFBKMTQ8IXQ9 262 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 TXNDC17Q9BRA2 123 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 AAMDCQ9H7C9 122 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 TNFSF18Q9UNG2 199 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 NEU3Q9UQ49 428 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 TMEM30CPA0ZSE6 113 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 ERVH48-1M5A8F1 160 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 CYB561P49447 251 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 MLF1P58340 268 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 KIRREL2Q6UWL6 708 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 POM121Q96HA1 1249 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 MIXL1Q9H2W2 232 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 CDK5RAP2Q96SN8 1893 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 NCBP2LA6PVI3 153 aaKnown RBP7.36□□□□□ -1.23
APOB-201ENST00000233242 ARG1P05089 322 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 HTR1DP28221 377 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 CSNK1EP49674 416 aaKnown RBP7.36□□□□□ -1.23
APOB-201ENST00000233242 EIF4E3Q8N5X7 224 aaKnown RBP7.36□□□□□ -1.23
APOB-201ENST00000233242 OR2M7Q8NG81 312 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 OR5D13Q8NGL4 314 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 BLNKQ8WV28 456 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 TMEM167BQ9NRX6 74 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 RREB1Q92766 1687 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 C3orf85A0A1B0GTC6 90 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 LINC01387J3KSC0 135 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 CD1CP29017 333 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 SRP14P37108 136 aaKnown RBP7.36□□□□□ -1.23
APOB-201ENST00000233242 ASTLQ6HA08 431 aaPredicted RBP7.36□□□□□ -1.23
APOB-201ENST00000233242 DECR2Q9NUI1 292 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 KCNE1BA0A087WTH5 132 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 CRYM-AS1A6NIL9 109 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 C11orf94C9JXX5 98 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 CER1O95813 267 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 NAT2P11245 290 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 ZBTB25P24278 435 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 CHRNA7P36544 502 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 FAM3AP98173 230 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 KIAA0040Q15053 153 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 CLEC18BQ6UXF7 455 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 HCFC1R1Q9NWW0 138 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 ZNF835Q9Y2P0 537 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 IGLV3-16A0A075B6K0 115 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 NPIPB8E9PQR5 432 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 DHRS3O75911 302 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 TIMP1P01033 207 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 MT-ND6P03923 174 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 M0R2Z0 102 aa7.36□□□□□ -1.23
APOB-201ENST00000233242 MRPS18AQ9NVS2 196 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms