RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 ACSM6Q6P461 480 aa11.93□□□□□ -0.5
NEK4-201ENST00000233027 OR2Z1Q8NG97 314 aa11.93□□□□□ -0.5
NEK4-201ENST00000233027 IFT22Q9H7X7 185 aa11.93□□□□□ -0.5
NEK4-201ENST00000233027 TCRBV16S1A1N1A0A5B0 115 aa11.93□□□□□ -0.5
NEK4-201ENST00000233027 CNN1P51911 297 aaKnown RBP11.93□□□□□ -0.5
NEK4-201ENST00000233027 TOMM20LQ6UXN7 152 aa11.93□□□□□ -0.5
NEK4-201ENST00000233027 ABI3BPQ7Z7G0 1075 aa11.93□□□□□ -0.5
NEK4-201ENST00000233027 TMEM230Q96A57 120 aa11.93□□□□□ -0.5
NEK4-201ENST00000233027 ARRDC1-AS1Q9H2J1 176 aa11.93□□□□□ -0.5
NEK4-201ENST00000233027 ZNF391Q9UJN7 358 aa11.93□□□□□ -0.5
NEK4-201ENST00000233027 TMEM30CPA0ZSE6 113 aa11.93□□□□□ -0.5
NEK4-201ENST00000233027 LEUTXA8MZ59 168 aa11.93□□□□□ -0.5
NEK4-201ENST00000233027 RPS4XP62701 263 aaKnown RBP11.93□□□□□ -0.5
NEK4-201ENST00000233027 KMT5CQ86Y97 462 aa11.93□□□□□ -0.5
NEK4-201ENST00000233027 C11orf42Q8N5U0 333 aa11.93□□□□□ -0.5
NEK4-201ENST00000233027 VAMP8Q9BV40 100 aa11.93□□□□□ -0.5
NEK4-201ENST00000233027 MTCH2Q9Y6C9 303 aa11.93□□□□□ -0.5
NEK4-201ENST00000233027 SERTM1A2A2V5 107 aa11.92□□□□□ -0.5
NEK4-201ENST00000233027 DHRS3O75911 302 aa11.92□□□□□ -0.5
NEK4-201ENST00000233027 CXCL3P19876 107 aa11.92□□□□□ -0.5
NEK4-201ENST00000233027 IGHV3-43A0A0B4J1X8 118 aa11.92□□□□□ -0.5
NEK4-201ENST00000233027 LILRA5A6NI73 299 aa11.92□□□□□ -0.5
NEK4-201ENST00000233027 DUS4LO95620 317 aaKnown RBP11.92□□□□□ -0.5
NEK4-201ENST00000233027 HPP00738 406 aa11.92□□□□□ -0.5
NEK4-201ENST00000233027 IGHV3-43DP0DP04 118 aa11.92□□□□□ -0.5
NEK4-201ENST00000233027 CBLN3Q6UW01 205 aa11.92□□□□□ -0.5
NEK4-201ENST00000233027 SARAFQ96BY9 339 aa11.92□□□□□ -0.5
NEK4-201ENST00000233027 ALG14Q96F25 216 aa11.92□□□□□ -0.5
NEK4-201ENST00000233027 GPR137Q96N19 417 aa11.92□□□□□ -0.5
NEK4-201ENST00000233027 NDFIP1Q9BT67 221 aa11.92□□□□□ -0.5
NEK4-201ENST00000233027 FFAR1O14842 300 aa11.92□□□□□ -0.5
NEK4-201ENST00000233027 PATE4P0C8F1 98 aa11.92□□□□□ -0.5
NEK4-201ENST00000233027 C9orf50Q5SZB4 431 aa11.92□□□□□ -0.5
NEK4-201ENST00000233027 CD300LDQ6UXZ3 194 aa11.92□□□□□ -0.5
NEK4-201ENST00000233027 RPP25Q9BUL9 199 aaKnown RBP11.92□□□□□ -0.5
NEK4-201ENST00000233027 LSM2Q9Y333 95 aaKnown RBP11.92□□□□□ -0.5
NEK4-201ENST00000233027 WSB1Q9Y6I7 421 aa11.92□□□□□ -0.5
NEK4-201ENST00000233027 RRP8O43159 456 aaKnown RBP11.92□□□□□ -0.5
NEK4-201ENST00000233027 TBX19O60806 448 aa11.92□□□□□ -0.5
NEK4-201ENST00000233027 ADAP1O75689 374 aa11.92□□□□□ -0.5
NEK4-201ENST00000233027 CD200P41217 278 aa11.92□□□□□ -0.5
NEK4-201ENST00000233027 LPAR6P43657 344 aa11.92□□□□□ -0.5
NEK4-201ENST00000233027 SLC38A11Q08AI6 406 aa11.92□□□□□ -0.5
NEK4-201ENST00000233027 FZD5Q13467 585 aa11.92□□□□□ -0.5
NEK4-201ENST00000233027 STUMQ69YW2 141 aa11.92□□□□□ -0.5
NEK4-201ENST00000233027 ANKRD37Q7Z713 158 aa11.92□□□□□ -0.5
NEK4-201ENST00000233027 MYPOPQ86VE0 399 aaPredicted RBP11.92□□□□□ -0.5
NEK4-201ENST00000233027 ZNF547Q8IVP9 402 aa11.92□□□□□ -0.5
NEK4-201ENST00000233027 EDARADDQ8WWZ3 215 aa11.92□□□□□ -0.5
NEK4-201ENST00000233027 SPSB1Q96BD6 273 aa11.92□□□□□ -0.5
NEK4-201ENST00000233027 PLPP3O14495 311 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 FCGR3BO75015 233 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 CTLA4P16410 223 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 GUSBP11Q6P575 273 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 POM121L2Q96KW2 1035 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 MIXL1Q9H2W2 232 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 ZNF275Q9NSD4 429 aaPredicted RBP11.91□□□□□ -0.5
NEK4-201ENST00000233027 FBXL17Q9UF56 701 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 MRM2Q9UI43 246 aaKnown RBP11.91□□□□□ -0.5
NEK4-201ENST00000233027 LOC102723971A0A1B0GUV8 181 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 TCAPO15273 167 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 OR1C1Q15619 314 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 RNF165Q6ZSG1 346 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 TDHQ8IZJ6 230 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 C10orf111Q8N326 155 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 OR4D9Q8NGE8 314 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 OR2A5Q96R48 311 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 GOLT1BQ9Y3E0 138 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 LMO7DNF2Z398 122 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 GYPAP02724 150 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 MOB3BQ86TA1 216 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 NAA60Q9H7X0 242 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 XKRY2A2RUG3 117 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 METTL12A8MUP2 240 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 SPP1P10451 314 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 HNRNPA3P51991 378 aaKnown RBP11.91□□□□□ -0.5
NEK4-201ENST00000233027 RNASEKQ6P5S7 137 aaKnown RBP11.91□□□□□ -0.5
NEK4-201ENST00000233027 FAM219AQ8IW50 185 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 OR11H7Q8NGC8 314 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 ZNF596Q8TC21 504 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 KISS1RQ969F8 398 aaPredicted RBP11.91□□□□□ -0.5
NEK4-201ENST00000233027 WDR34Q96EX3 536 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 SLC25A22Q9H936 323 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 UQCC1Q9NVA1 299 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 NHSQ6T4R5 1651 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 TRGV10A0A0A0MS01 117 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 ZNF737O75373 536 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 CISD3P0C7P0 127 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 FAM3AP98173 230 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 HLA-BQ31612 363 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 DGAT2L6Q6ZPD8 337 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 RFESDQ8TAC1 157 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 TMED3Q9Y3Q3 217 aa11.91□□□□□ -0.5
NEK4-201ENST00000233027 SHISA7A6NL88 538 aa11.9□□□□□ -0.5
NEK4-201ENST00000233027 NGFP01138 241 aa11.9□□□□□ -0.5
NEK4-201ENST00000233027 IGF2P01344 180 aa11.9□□□□□ -0.5
NEK4-201ENST00000233027 IGHV3-13P01766 116 aa11.9□□□□□ -0.5
NEK4-201ENST00000233027 IGHV3-7P01780 117 aa11.9□□□□□ -0.5
NEK4-201ENST00000233027 ZNF32P17041 273 aa11.9□□□□□ -0.5
NEK4-201ENST00000233027 SLC16A13Q7RTY0 426 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms