RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 TUSC5Q8IXB3 177 aa16.85■□□□□ 0.29
SMPD3-201ENST00000219334 FKBP11Q9NYL4 201 aa16.85■□□□□ 0.29
SMPD3-201ENST00000219334 RCL1Q9Y2P8 373 aaKnown RBP16.85■□□□□ 0.29
SMPD3-201ENST00000219334 A0A1W2PN81 502 aa16.85■□□□□ 0.29
SMPD3-201ENST00000219334 MEX3AA1L020 520 aaKnown RBP16.85■□□□□ 0.29
SMPD3-201ENST00000219334 H3BP45 60 aa16.85■□□□□ 0.29
SMPD3-201ENST00000219334 DNASE2O00115 360 aaPredicted RBP16.85■□□□□ 0.29
SMPD3-201ENST00000219334 CHRNA7P36544 502 aa16.85■□□□□ 0.29
SMPD3-201ENST00000219334 PCBP3P57721 371 aaKnown RBP16.85■□□□□ 0.29
SMPD3-201ENST00000219334 C3AR1Q16581 482 aa16.85■□□□□ 0.29
SMPD3-201ENST00000219334 ZNF239Q16600 458 aaKnown RBP16.85■□□□□ 0.29
SMPD3-201ENST00000219334 RNF165Q6ZSG1 346 aa16.85■□□□□ 0.29
SMPD3-201ENST00000219334 ADGRL4Q9HBW9 690 aa16.85■□□□□ 0.29
SMPD3-201ENST00000219334 OR5V1Q9UGF6 321 aa16.85■□□□□ 0.29
SMPD3-201ENST00000219334 A0A1B0GUH1 482 aa16.85■□□□□ 0.29
SMPD3-201ENST00000219334 A0A1W2PQD3 144 aa16.85■□□□□ 0.29
SMPD3-201ENST00000219334 ISXQ2M1V0 245 aa16.85■□□□□ 0.29
SMPD3-201ENST00000219334 PLAC9Q5JTB6 97 aa16.85■□□□□ 0.29
SMPD3-201ENST00000219334 OR6S1Q8NH40 331 aa16.85■□□□□ 0.29
SMPD3-201ENST00000219334 RBPMSQ93062 196 aaKnown RBP16.85■□□□□ 0.29
SMPD3-201ENST00000219334 HGDQ93099 445 aa16.85■□□□□ 0.29
SMPD3-201ENST00000219334 LY86O95711 162 aa16.85■□□□□ 0.29
SMPD3-201ENST00000219334 Q3ZCU0 254 aa16.85■□□□□ 0.29
SMPD3-201ENST00000219334 MAMSTRQ6ZN01 415 aa16.85■□□□□ 0.29
SMPD3-201ENST00000219334 TIPARPQ7Z3E1 657 aaKnown RBP16.85■□□□□ 0.29
SMPD3-201ENST00000219334 TMEM171Q8WVE6 324 aa16.85■□□□□ 0.29
SMPD3-201ENST00000219334 ZG16BQ96DA0 208 aa16.85■□□□□ 0.29
SMPD3-201ENST00000219334 NEIL1Q96FI4 390 aaPredicted RBP16.85■□□□□ 0.29
SMPD3-201ENST00000219334 LOXL4Q96JB6 756 aa16.85■□□□□ 0.29
SMPD3-201ENST00000219334 TMEM208Q9BTX3 173 aa16.85■□□□□ 0.29
SMPD3-201ENST00000219334 CTDSP1Q9GZU7 261 aa16.85■□□□□ 0.29
SMPD3-201ENST00000219334 SAP30LQ9HAJ7 183 aa16.85■□□□□ 0.29
SMPD3-201ENST00000219334 PPP1R2P9O14990 202 aa16.84■□□□□ 0.29
SMPD3-201ENST00000219334 FGF2P09038 288 aa16.84■□□□□ 0.29
SMPD3-201ENST00000219334 OR4F17Q8NGA8 305 aa16.84■□□□□ 0.29
SMPD3-201ENST00000219334 SMIM4Q8WVI0 70 aa16.84■□□□□ 0.29
SMPD3-201ENST00000219334 GPANK1O95872 356 aa16.84■□□□□ 0.29
SMPD3-201ENST00000219334 KIR2DS2P43631 304 aa16.84■□□□□ 0.29
SMPD3-201ENST00000219334 H3F3CQ6NXT2 135 aa16.84■□□□□ 0.29
SMPD3-201ENST00000219334 C20orf196Q8IYI0 205 aa16.84■□□□□ 0.29
SMPD3-201ENST00000219334 PTP4A1Q93096 173 aa16.84■□□□□ 0.29
SMPD3-201ENST00000219334 OCEL1Q9H607 264 aa16.84■□□□□ 0.29
SMPD3-201ENST00000219334 LTBP4Q8N2S1 1624 aa16.84■□□□□ 0.29
SMPD3-201ENST00000219334 CDK5Q00535 292 aa16.84■□□□□ 0.29
SMPD3-201ENST00000219334 DYNC2LI1Q8TCX1 351 aa16.84■□□□□ 0.29
SMPD3-201ENST00000219334 MS4A5Q9H3V2 200 aa16.84■□□□□ 0.29
SMPD3-201ENST00000219334 BOLA1Q9Y3E2 137 aa16.84■□□□□ 0.29
SMPD3-201ENST00000219334 A0A1W2PRD5 423 aa16.84■□□□□ 0.29
SMPD3-201ENST00000219334 A0A1W2PRF3 423 aa16.84■□□□□ 0.29
SMPD3-201ENST00000219334 A0A1W2PRM7 423 aa16.84■□□□□ 0.29
SMPD3-201ENST00000219334 F2RL2O00254 374 aa16.84■□□□□ 0.29
SMPD3-201ENST00000219334 C1QBP02746 253 aa16.84■□□□□ 0.29
SMPD3-201ENST00000219334 OR2B8PP59922 312 aa16.84■□□□□ 0.29
SMPD3-201ENST00000219334 RPUSD3Q6P087 351 aaKnown RBP16.84■□□□□ 0.29
SMPD3-201ENST00000219334 WDR54Q9H977 334 aa16.84■□□□□ 0.29
SMPD3-201ENST00000219334 SLC17A5Q9NRA2 495 aa16.84■□□□□ 0.29
SMPD3-201ENST00000219334 MASP2O00187 686 aa16.83■□□□□ 0.29
SMPD3-201ENST00000219334 KLK11Q9UBX7 282 aa16.83■□□□□ 0.29
SMPD3-201ENST00000219334 S100A8P05109 93 aa16.83■□□□□ 0.29
SMPD3-201ENST00000219334 ST8SIA2Q92186 375 aa16.83■□□□□ 0.29
SMPD3-201ENST00000219334 ARHGAP5-AS1Q96IT6 56 aa16.83■□□□□ 0.29
SMPD3-201ENST00000219334 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.83■□□□□ 0.29
SMPD3-201ENST00000219334 GOLT1BQ9Y3E0 138 aa16.83■□□□□ 0.29
SMPD3-201ENST00000219334 SMIM18P0DKX4 95 aa16.83■□□□□ 0.28
SMPD3-201ENST00000219334 ZNF441Q8N8Z8 693 aa16.83■□□□□ 0.28
SMPD3-201ENST00000219334 GSX2Q9BZM3 304 aa16.83■□□□□ 0.28
SMPD3-201ENST00000219334 NTMQ9P121 344 aa16.83■□□□□ 0.28
SMPD3-201ENST00000219334 LAMB1P07942 1786 aa16.83■□□□□ 0.28
SMPD3-201ENST00000219334 UMAD1C9J7I0 102 aa16.83■□□□□ 0.28
SMPD3-201ENST00000219334 C16orf97H3BN30 126 aa16.83■□□□□ 0.28
SMPD3-201ENST00000219334 TMPRSS2O15393 492 aa16.83■□□□□ 0.28
SMPD3-201ENST00000219334 PDCD6O75340 191 aa16.83■□□□□ 0.28
SMPD3-201ENST00000219334 HIST1H1DP16402 221 aaKnown RBP16.83■□□□□ 0.28
SMPD3-201ENST00000219334 LPAR6P43657 344 aa16.83■□□□□ 0.28
SMPD3-201ENST00000219334 GUCA2AQ02747 115 aa16.83■□□□□ 0.28
SMPD3-201ENST00000219334 SLC25A30Q5SVS4 291 aa16.83■□□□□ 0.28
SMPD3-201ENST00000219334 MED30Q96HR3 178 aa16.83■□□□□ 0.28
SMPD3-201ENST00000219334 A0A0A6YYJ9 748 aa16.83■□□□□ 0.28
SMPD3-201ENST00000219334 CD80P33681 288 aa16.83■□□□□ 0.28
SMPD3-201ENST00000219334 CDKN2AP42771 156 aaKnown RBP16.83■□□□□ 0.28
SMPD3-201ENST00000219334 ASCL1P50553 236 aa16.83■□□□□ 0.28
SMPD3-201ENST00000219334 BCL2L2Q92843 193 aaPredicted RBP16.83■□□□□ 0.28
SMPD3-201ENST00000219334 SMIM7Q9BQ49 75 aa16.83■□□□□ 0.28
SMPD3-201ENST00000219334 UBE2L5PA0A1B0GUS4 154 aa16.82■□□□□ 0.28
SMPD3-201ENST00000219334 FAM157AC9JC47 383 aa16.82■□□□□ 0.28
SMPD3-201ENST00000219334 EML2O95834 649 aa16.82■□□□□ 0.28
SMPD3-201ENST00000219334 CTLA4P16410 223 aa16.82■□□□□ 0.28
SMPD3-201ENST00000219334 MRGPRDQ8TDS7 321 aa16.82■□□□□ 0.28
SMPD3-201ENST00000219334 RYDENQ9NUL5 291 aaKnown RBP16.82■□□□□ 0.28
SMPD3-201ENST00000219334 LIMK1P53667 647 aa16.82■□□□□ 0.28
SMPD3-201ENST00000219334 IGHV3-43A0A0B4J1X8 118 aa16.82■□□□□ 0.28
SMPD3-201ENST00000219334 B4E171 279 aa16.82■□□□□ 0.28
SMPD3-201ENST00000219334 IGHV3-43DP0DP04 118 aa16.82■□□□□ 0.28
SMPD3-201ENST00000219334 FPR2P25090 351 aa16.82■□□□□ 0.28
SMPD3-201ENST00000219334 TSPAN7P41732 249 aa16.82■□□□□ 0.28
SMPD3-201ENST00000219334 FOXO1Q12778 655 aa16.82■□□□□ 0.28
SMPD3-201ENST00000219334 SPINT1O43278 529 aa16.82■□□□□ 0.28
SMPD3-201ENST00000219334 CD160O95971 181 aa16.82■□□□□ 0.28
SMPD3-201ENST00000219334 GP1BAP07359 652 aa16.82■□□□□ 0.28
SMPD3-201ENST00000219334 BAP18Q8IXM2 172 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms