RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, human

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00963-215	ENST00000622972	DOCK11	Q5JSL3	2073 aa		4.92	□□□□□ -1.62
LINC00963-215	ENST00000622972	IGKV1-27	A0A075B6S5	117 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	IGKV1-9	A0A0C4DH69	117 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972		A0A0U1RQV5	110 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	LOC107986453	A0A1B0GWG9	222 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	DAPL1	A0PJW8	107 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	MAGEA13P	A6NCF6	341 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972		F5H5P2	479 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	LOC110117498-PIK3R3	F6TDL0	507 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972		J3QLW9	94 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	PIN1P1	O15428	100 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	TBX1	O43435	398 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	ZNF254	O75437	659 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	SULT1C4	O75897	302 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	ZFPL1	O95159	310 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	CD55	P08174	381 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	ADH4	P08319	380 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	CCDC159	P0C7I6	412 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	SMIM18	P0DKX4	95 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	IRF2	P14316	349 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	FAH	P16930	419 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	ZNF19	P17023	458 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	EGR1	P18146	543 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	TUBG1	P23258	451 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	CA6	P23280	308 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	HSD11B1	P28845	292 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	RGS6	P49758	472 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	RIDA	P52758	137 aa	Known RBP	4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	ACTC1	P68032	377 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	ACTA1	P68133	377 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	CDK5R1	Q15078	307 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	MPPED2	Q15777	294 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	XP32	Q5T750	250 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	PRAMEF6	Q5VXH4	476 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	TMEM42	Q69YG0	159 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	USP43	Q70EL4	1123 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	SYS1	Q8N2H4	156 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	NANOGP1	Q8N7R0	232 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	YIPF7	Q8N8F6	280 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	FAM216A	Q8WUB2	273 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	ASB17	Q8WXJ9	295 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	ADAT3	Q96EY9	351 aa	Predicted RBP	4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	TMEM80	Q96HE8	168 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	PGAM5	Q96HS1	289 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	FAM71F1	Q96KD3	344 aa	Predicted RBP	4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	CCDC140	Q96MF4	163 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972		Q96MT0	163 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	DUX5	Q96PT3	197 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	OR2V2	Q96R30	315 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	MNT	Q99583	582 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	PDCD1LG2	Q9BQ51	273 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	CDCA4	Q9BXL8	241 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	MRO	Q9BYG7	248 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	MS4A7	Q9GZW8	240 aa	Predicted RBP	4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	PPIL3	Q9H2H8	161 aa	Known RBP	4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	VCX	Q9H320	206 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	NIPAL2	Q9H841	368 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	PATZ1	Q9HBE1	687 aa	Known RBP	4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	TUBG2	Q9NRH3	451 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	OR5V1	Q9UGF6	321 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	LRRC42	Q9Y546	428 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	AUP1	Q9Y679	476 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	TMEM14A	Q9Y6G1	99 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972		V9GYS6	101 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	FBN3	Q75N90	2809 aa		4.91	□□□□□ -1.62
LINC00963-215	ENST00000622972	MXRA5	Q9NR99	2828 aa		4.9	□□□□□ -1.62
LINC00963-215	ENST00000622972	PNMA8C	A0A1B0GUJ8	204 aa		4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	TMEM89	A2RUT3	159 aa		4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	EFCAB10	A6NFE3	127 aa		4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	ANKRD61	A6NGH8	418 aa		4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	LRRC30	A6NM36	301 aa		4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	PTGES3L	E9PB15	166 aa		4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	PHYH	O14832	338 aa		4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	OGG1	O15527	345 aa		4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	SPRY1	O43609	319 aa	Predicted RBP	4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	PTBP3	O95758	552 aa	Known RBP	4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	FADS2	O95864	444 aa	Known RBP	4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	IGHV2-70	P01814	119 aa		4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	TFF1	P04155	84 aa		4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	KRT8	P05787	483 aa		4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	RPS2	P15880	293 aa	Known RBP	4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	ZFP36	P26651	326 aa	Known RBP	4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	DCK	P27707	260 aa		4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	MDH2	P40926	338 aa	Known RBP	4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	ECI1	P42126	302 aa		4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	HSPA13	P48723	471 aa		4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	SRP9	P49458	86 aa	Known RBP	4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	BTG1	P62324	171 aa		4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	GNB2	P62879	340 aa		4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	CSNK2B	P67870	215 aa		4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	MALL	Q13021	153 aa		4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	BAMBI	Q13145	260 aa		4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	ALKBH1	Q13686	389 aa	Known RBP	4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	TAF13	Q15543	124 aa		4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	UBE2V2	Q15819	145 aa		4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	SSX1	Q16384	188 aa		4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	KLHL22	Q53GT1	634 aa		4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	FAM201A	Q5SY85	155 aa		4.9	□□□□□ -1.63
LINC00963-215	ENST00000622972	FAM27D1	Q5T7N8	215 aa		4.9	□□□□□ -1.63

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