RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 CPEB3Q8NE35 698 aaKnown RBP13.68□□□□□ -0.22
CPSF1-213ENST00000620219 OR14K1Q8NGZ2 314 aa13.68□□□□□ -0.22
CPSF1-213ENST00000620219 RNF166Q96A37 237 aaPredicted RBP13.68□□□□□ -0.22
CPSF1-213ENST00000620219 OR2J1Q9GZK6 312 aa13.68□□□□□ -0.22
CPSF1-213ENST00000620219 GSKIPQ9P0R6 139 aa13.68□□□□□ -0.22
CPSF1-213ENST00000620219 RABL2AQ9UBK7 228 aaPredicted RBP13.68□□□□□ -0.22
CPSF1-213ENST00000620219 DNAJB11Q9UBS4 358 aa13.68□□□□□ -0.22
CPSF1-213ENST00000620219 TINAGQ9UJW2 476 aa13.68□□□□□ -0.22
CPSF1-213ENST00000620219 RABL2BQ9UNT1 228 aa13.68□□□□□ -0.22
CPSF1-213ENST00000620219 FXYD6-FXYD2A0A087WZ82 144 aa13.68□□□□□ -0.22
CPSF1-213ENST00000620219 NAP1L6A6NFF2 107 aa13.68□□□□□ -0.22
CPSF1-213ENST00000620219 BET1O15155 118 aa13.68□□□□□ -0.22
CPSF1-213ENST00000620219 ISG15P05161 165 aa13.68□□□□□ -0.22
CPSF1-213ENST00000620219 TMEM255AQ5JRV8 349 aa13.68□□□□□ -0.22
CPSF1-213ENST00000620219 ZNF431Q8TF32 576 aaPredicted RBP13.68□□□□□ -0.22
CPSF1-213ENST00000620219 FXYD6Q9H0Q3 95 aa13.68□□□□□ -0.22
CPSF1-213ENST00000620219 TMEM165Q9HC07 324 aa13.68□□□□□ -0.22
CPSF1-213ENST00000620219 SLC22A25Q6T423 547 aa13.67□□□□□ -0.22
CPSF1-213ENST00000620219 FIP1L1Q6UN15 594 aaKnown RBP13.67□□□□□ -0.22
CPSF1-213ENST00000620219 ASCC1Q8N9N2 400 aaKnown RBP13.67□□□□□ -0.22
CPSF1-213ENST00000620219 OR10AD1Q8NGE0 317 aa13.67□□□□□ -0.22
CPSF1-213ENST00000620219 OR8H1Q8NGG4 311 aa13.67□□□□□ -0.22
CPSF1-213ENST00000620219 CHAC2Q8WUX2 184 aa13.67□□□□□ -0.22
CPSF1-213ENST00000620219 EMG1Q92979 244 aaKnown RBP13.67□□□□□ -0.22
CPSF1-213ENST00000620219 ESPL1Q14674 2120 aa13.67□□□□□ -0.22
CPSF1-213ENST00000620219 ZNF724A8MTY0 619 aa13.67□□□□□ -0.22
CPSF1-213ENST00000620219 ZNF16P17020 682 aaPredicted RBP13.67□□□□□ -0.22
CPSF1-213ENST00000620219 SSTR2P30874 369 aa13.67□□□□□ -0.22
CPSF1-213ENST00000620219 NPY4RP50391 375 aa13.67□□□□□ -0.22
CPSF1-213ENST00000620219 FOXF2Q12947 444 aa13.67□□□□□ -0.22
CPSF1-213ENST00000620219 UBE2V2Q15819 145 aa13.67□□□□□ -0.22
CPSF1-213ENST00000620219 TAAR6Q96RI8 345 aa13.67□□□□□ -0.22
CPSF1-213ENST00000620219 UQCC2Q9BRT2 126 aa13.67□□□□□ -0.22
CPSF1-213ENST00000620219 C14orf166Q9Y224 244 aaKnown RBP13.67□□□□□ -0.22
CPSF1-213ENST00000620219 ZNF292O60281 2723 aa13.67□□□□□ -0.22
CPSF1-213ENST00000620219 K7EM74 188 aa13.67□□□□□ -0.22
CPSF1-213ENST00000620219 LHFPL2Q6ZUX7 228 aa13.67□□□□□ -0.22
CPSF1-213ENST00000620219 NABP1Q96AH0 204 aa13.67□□□□□ -0.22
CPSF1-213ENST00000620219 MARVELD1Q9BSK0 173 aa13.67□□□□□ -0.22
CPSF1-213ENST00000620219 GLRX2Q9NS18 164 aa13.67□□□□□ -0.22
CPSF1-213ENST00000620219 PLCE1Q9P212 2302 aa13.67□□□□□ -0.22
CPSF1-213ENST00000620219 A0A1B0GTI1 187 aa13.66□□□□□ -0.22
CPSF1-213ENST00000620219 DNASE1P24855 282 aa13.66□□□□□ -0.22
CPSF1-213ENST00000620219 HRH1P35367 487 aa13.66□□□□□ -0.22
CPSF1-213ENST00000620219 FUT6P51993 359 aa13.66□□□□□ -0.22
CPSF1-213ENST00000620219 PPP1CBP62140 327 aa13.66□□□□□ -0.22
CPSF1-213ENST00000620219 ITPKCQ96DU7 683 aa13.66□□□□□ -0.22
CPSF1-213ENST00000620219 C7orf50Q9BRJ6 194 aaKnown RBP13.66□□□□□ -0.22
CPSF1-213ENST00000620219 RGCCQ9H4X1 137 aa13.66□□□□□ -0.22
CPSF1-213ENST00000620219 FAM90A27PA6NNH2 459 aa13.66□□□□□ -0.22
CPSF1-213ENST00000620219 VSTM5A8MXK1 200 aa13.66□□□□□ -0.22
CPSF1-213ENST00000620219 TM4SF5O14894 197 aa13.66□□□□□ -0.22
CPSF1-213ENST00000620219 CDC14BO60729 498 aa13.66□□□□□ -0.22
CPSF1-213ENST00000620219 TMPRSS3P57727 454 aa13.66□□□□□ -0.22
CPSF1-213ENST00000620219 SNTB1Q13884 538 aaKnown RBP13.66□□□□□ -0.22
CPSF1-213ENST00000620219 OR1K1Q8NGR3 316 aa13.66□□□□□ -0.22
CPSF1-213ENST00000620219 ST6GAL2Q96JF0 529 aa13.66□□□□□ -0.22
CPSF1-213ENST00000620219 SOSTQ9BQB4 213 aa13.66□□□□□ -0.22
CPSF1-213ENST00000620219 RYDENQ9NUL5 291 aaKnown RBP13.66□□□□□ -0.22
CPSF1-213ENST00000620219 MGAT4AQ9UM21 535 aa13.66□□□□□ -0.22
CPSF1-213ENST00000620219 AHRRA9YTQ3 701 aa13.66□□□□□ -0.22
CPSF1-213ENST00000620219 ANOS1P23352 680 aa13.66□□□□□ -0.22
CPSF1-213ENST00000620219 ACKR3P25106 362 aa13.66□□□□□ -0.22
CPSF1-213ENST00000620219 GABRA2P47869 451 aa13.66□□□□□ -0.22
CPSF1-213ENST00000620219 RBMS2Q15434 407 aaKnown RBP13.66□□□□□ -0.22
CPSF1-213ENST00000620219 EGFL6Q8IUX8 553 aa13.66□□□□□ -0.22
CPSF1-213ENST00000620219 UBALD1Q8TB05 177 aa13.66□□□□□ -0.22
CPSF1-213ENST00000620219 SPSB1Q96BD6 273 aa13.66□□□□□ -0.22
CPSF1-213ENST00000620219 CHST5Q9GZS9 411 aa13.66□□□□□ -0.22
CPSF1-213ENST00000620219 ZNF205O95201 554 aa13.66□□□□□ -0.22
CPSF1-213ENST00000620219 ZNF81P51508 661 aa13.66□□□□□ -0.22
CPSF1-213ENST00000620219 GK2Q14410 553 aaPredicted RBP13.66□□□□□ -0.22
CPSF1-213ENST00000620219 HACD4Q5VWC8 232 aa13.66□□□□□ -0.22
CPSF1-213ENST00000620219 ZNF565Q8N9K5 539 aa13.66□□□□□ -0.22
CPSF1-213ENST00000620219 FAAP24Q9BTP7 215 aa13.66□□□□□ -0.22
CPSF1-213ENST00000620219 CLEC4MQ9H2X3 399 aaPredicted RBP13.66□□□□□ -0.22
CPSF1-213ENST00000620219 PYCARD-AS1I3L0S3 204 aa13.65□□□□□ -0.22
CPSF1-213ENST00000620219 SYNGR3O43761 229 aa13.65□□□□□ -0.22
CPSF1-213ENST00000620219 BAMBIQ13145 260 aa13.65□□□□□ -0.22
CPSF1-213ENST00000620219 BEND4Q6ZU67 534 aa13.65□□□□□ -0.22
CPSF1-213ENST00000620219 TMEM82A0PJX8 343 aa13.65□□□□□ -0.22
CPSF1-213ENST00000620219 CELA3BP08861 270 aa13.65□□□□□ -0.22
CPSF1-213ENST00000620219 BHLHA15Q7RTS1 189 aaPredicted RBP13.65□□□□□ -0.22
CPSF1-213ENST00000620219 DUSP18Q8NEJ0 188 aa13.65□□□□□ -0.22
CPSF1-213ENST00000620219 ZNF780AO75290 641 aaPredicted RBP13.65□□□□□ -0.22
CPSF1-213ENST00000620219 HPXP02790 462 aa13.65□□□□□ -0.22
CPSF1-213ENST00000620219 CPN1P15169 458 aa13.65□□□□□ -0.22
CPSF1-213ENST00000620219 CXCL3P19876 107 aa13.65□□□□□ -0.22
CPSF1-213ENST00000620219 KLF9Q13886 244 aaPredicted RBP13.65□□□□□ -0.22
CPSF1-213ENST00000620219 ST3GAL2Q16842 350 aa13.65□□□□□ -0.22
CPSF1-213ENST00000620219 LTC4SQ16873 150 aa13.65□□□□□ -0.22
CPSF1-213ENST00000620219 SLC25A40Q8TBP6 338 aa13.65□□□□□ -0.22
CPSF1-213ENST00000620219 WNT2BQ93097 391 aa13.65□□□□□ -0.22
CPSF1-213ENST00000620219 PPA2Q9H2U2 334 aa13.65□□□□□ -0.22
CPSF1-213ENST00000620219 BCO1Q9HAY6 547 aa13.65□□□□□ -0.22
CPSF1-213ENST00000620219 MSL2Q9HCI7 577 aa13.65□□□□□ -0.22
CPSF1-213ENST00000620219 BOD1L1Q8NFC6 3051 aa13.65□□□□□ -0.22
CPSF1-213ENST00000620219 FAM208BQ5VWN6 2430 aa13.65□□□□□ -0.22
CPSF1-213ENST00000620219 DMXL1Q9Y485 3027 aa13.65□□□□□ -0.22
CPSF1-213ENST00000620219 A0A0U1RQV5 110 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms