RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 APMAPQ9HDC9 416 aa13.58□□□□□ -0.24
NOP56-220ENST00000616692 MRPL27Q9P0M9 148 aaKnown RBP13.58□□□□□ -0.24
NOP56-220ENST00000616692 KLK11Q9UBX7 282 aa13.58□□□□□ -0.24
NOP56-220ENST00000616692 NTNG1Q9Y2I2 539 aa13.58□□□□□ -0.24
NOP56-220ENST00000616692 TBL1XO60907 577 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 LIMS3P0CW19 117 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 LIMS4P0CW20 117 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 OR12D1P0DN82 309 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 ACP1P24666 158 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 SCAND1P57086 179 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 RAB11AP62491 216 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 BAXQ07812 192 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 ADIGQ0VDE8 80 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 AWAT2Q6E213 333 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 Q6ZSR9 355 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 ZNF567Q8N184 647 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 OR52L1Q8NGH7 329 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 OR5W2Q8NH69 310 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 SLC35G5Q96KT7 338 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 ZNF649Q9BS31 505 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 MMP25Q9NPA2 562 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 CNIH4Q9P003 139 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 FRRS1LQ9P0K9 344 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 A0A1W2PRS3 328 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 PRICKLE3O43900 615 aaPredicted RBP13.57□□□□□ -0.24
NOP56-220ENST00000616692 TOX4O94842 621 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 SNRPBP14678 240 aaKnown RBP13.57□□□□□ -0.24
NOP56-220ENST00000616692 IMPA1P29218 277 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 S100GP29377 79 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 GLIPR1P48060 266 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 UCNP55089 124 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 SLC35A1P78382 337 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 COL10A1Q03692 680 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 TLE3Q04726 772 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 RAB40BQ12829 278 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 CCDC144NLQ6NUI1 221 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 RPL22L1Q6P5R6 122 aaKnown RBP13.57□□□□□ -0.24
NOP56-220ENST00000616692 C2CD4AQ8NCU7 369 aaPredicted RBP13.57□□□□□ -0.24
NOP56-220ENST00000616692 DVL3Q92997 716 aaPredicted RBP13.57□□□□□ -0.24
NOP56-220ENST00000616692 BBC3Q96PG8 261 aaPredicted RBP13.57□□□□□ -0.24
NOP56-220ENST00000616692 VAMP8Q9BV40 100 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 SLC5A7Q9GZV3 580 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 ELL3Q9HB65 397 aaPredicted RBP13.57□□□□□ -0.24
NOP56-220ENST00000616692 PAM16Q9Y3D7 125 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 A0A1W2PPV4 95 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 PMS2P2O95744 297 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 GPANK1O95872 356 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 CALCBP10092 127 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 CD70P32970 193 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 FAUP35544 74 aaKnown RBP13.57□□□□□ -0.24
NOP56-220ENST00000616692 EBPQ15125 230 aaKnown RBP13.57□□□□□ -0.24
NOP56-220ENST00000616692 TCTEX1D4Q5JR98 221 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 SOHLH1Q5JUK2 328 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 DHRS13Q6UX07 377 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 TOMM20LQ6UXN7 152 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 MRGPRGQ86SM5 289 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 OR4D9Q8NGE8 314 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 ASB10Q8WXI3 467 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 HIST1H2AAQ96QV6 131 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 GPR21Q99679 349 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 CITED2Q99967 270 aaPredicted RBP13.57□□□□□ -0.24
NOP56-220ENST00000616692 SNRNP25Q9BV90 132 aaKnown RBP13.57□□□□□ -0.24
NOP56-220ENST00000616692 SIRT3Q9NTG7 399 aaPredicted RBP13.57□□□□□ -0.24
NOP56-220ENST00000616692 GPATCH2Q9NW75 528 aa13.57□□□□□ -0.24
NOP56-220ENST00000616692 MRPL22Q9NWU5 206 aaKnown RBP13.57□□□□□ -0.24
NOP56-220ENST00000616692 SHROOM3Q8TF72 1996 aa13.56□□□□□ -0.24
NOP56-220ENST00000616692 GAGE12BA1L429 117 aa13.56□□□□□ -0.24
NOP56-220ENST00000616692 RNASET2O00584 256 aaKnown RBP13.56□□□□□ -0.24
NOP56-220ENST00000616692 MT-ATP6P00846 226 aa13.56□□□□□ -0.24
NOP56-220ENST00000616692 BLKP51451 505 aa13.56□□□□□ -0.24
NOP56-220ENST00000616692 ENDOGQ14249 297 aaKnown RBP13.56□□□□□ -0.24
NOP56-220ENST00000616692 MS4A13Q5J8X5 152 aa13.56□□□□□ -0.24
NOP56-220ENST00000616692 CALHM1Q8IU99 346 aa13.56□□□□□ -0.24
NOP56-220ENST00000616692 SLC38A9Q8NBW4 561 aa13.56□□□□□ -0.24
NOP56-220ENST00000616692 SLC26A10Q8NG04 563 aa13.56□□□□□ -0.24
NOP56-220ENST00000616692 OR6N1Q8NGY5 312 aa13.56□□□□□ -0.24
NOP56-220ENST00000616692 ZNF587Q96SQ5 575 aaPredicted RBP13.56□□□□□ -0.24
NOP56-220ENST00000616692 C1orf198Q9H425 327 aa13.56□□□□□ -0.24
NOP56-220ENST00000616692 RDH14Q9HBH5 336 aa13.56□□□□□ -0.24
NOP56-220ENST00000616692 SLC17A5Q9NRA2 495 aa13.56□□□□□ -0.24
NOP56-220ENST00000616692 MRPS18AQ9NVS2 196 aaKnown RBP13.56□□□□□ -0.24
NOP56-220ENST00000616692 BET1LQ9NYM9 111 aa13.56□□□□□ -0.24
NOP56-220ENST00000616692 TAS2R8Q9NYW2 309 aa13.56□□□□□ -0.24
NOP56-220ENST00000616692 SS18L2Q9UHA2 77 aa13.56□□□□□ -0.24
NOP56-220ENST00000616692 SLC45A2Q9UMX9 530 aa13.56□□□□□ -0.24
NOP56-220ENST00000616692 ZNF19P17023 458 aa13.56□□□□□ -0.24
NOP56-220ENST00000616692 UCP2P55851 309 aa13.56□□□□□ -0.24
NOP56-220ENST00000616692 RGNQ15493 299 aa13.56□□□□□ -0.24
NOP56-220ENST00000616692 CDO1Q16878 200 aa13.56□□□□□ -0.24
NOP56-220ENST00000616692 ZNF585AQ6P3V2 769 aa13.56□□□□□ -0.24
NOP56-220ENST00000616692 ACOT4Q8N9L9 421 aa13.56□□□□□ -0.24
NOP56-220ENST00000616692 OR2T27Q8NH04 317 aa13.56□□□□□ -0.24
NOP56-220ENST00000616692 GPR119Q8TDV5 335 aa13.56□□□□□ -0.24
NOP56-220ENST00000616692 RASD2Q96D21 266 aa13.56□□□□□ -0.24
NOP56-220ENST00000616692 FCRL2Q96LA5 508 aaPredicted RBP13.56□□□□□ -0.24
NOP56-220ENST00000616692 SLC17A9Q9BYT1 436 aa13.56□□□□□ -0.24
NOP56-220ENST00000616692 TMEM131Q92545 1883 aa13.55□□□□□ -0.24
NOP56-220ENST00000616692 TRAPPC6AO75865 159 aa13.55□□□□□ -0.24
NOP56-220ENST00000616692 PPP1R3DO95685 299 aa13.55□□□□□ -0.24
NOP56-220ENST00000616692 HOXB9P17482 250 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms