RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 PDZK1IP1Q13113 114 aa16.72■□□□□ 0.27
GABPB1-212ENST00000615671 NPAP1Q9NZP6 1156 aa16.72■□□□□ 0.27
GABPB1-212ENST00000615671 PCDHGA9Q9Y5G4 932 aaKnown RBP16.72■□□□□ 0.27
GABPB1-212ENST00000615671 AKR7A2O43488 359 aa16.71■□□□□ 0.27
GABPB1-212ENST00000615671 JTBO76095 146 aa16.71■□□□□ 0.27
GABPB1-212ENST00000615671 THBS4P35443 961 aa16.71■□□□□ 0.27
GABPB1-212ENST00000615671 GNG3P63215 75 aa16.71■□□□□ 0.27
GABPB1-212ENST00000615671 CCDC190Q86UF4 302 aa16.71■□□□□ 0.27
GABPB1-212ENST00000615671 LFNGQ8NES3 379 aa16.71■□□□□ 0.27
GABPB1-212ENST00000615671 ERRFI1Q9UJM3 462 aaPredicted RBP16.71■□□□□ 0.27
GABPB1-212ENST00000615671 SCGB1C2P0DMR2 95 aa16.71■□□□□ 0.27
GABPB1-212ENST00000615671 FAM3AP98173 230 aa16.71■□□□□ 0.27
GABPB1-212ENST00000615671 FAM26EQ8N5C1 309 aa16.71■□□□□ 0.27
GABPB1-212ENST00000615671 OR4F17Q8NGA8 305 aa16.71■□□□□ 0.27
GABPB1-212ENST00000615671 OR1B1Q8NGR6 318 aa16.71■□□□□ 0.27
GABPB1-212ENST00000615671 K7ESF4 209 aa16.71■□□□□ 0.27
GABPB1-212ENST00000615671 CTSVO60911 334 aa16.71■□□□□ 0.27
GABPB1-212ENST00000615671 CCL4P13236 92 aa16.71■□□□□ 0.27
GABPB1-212ENST00000615671 CTGFP29279 349 aa16.71■□□□□ 0.27
GABPB1-212ENST00000615671 A0A1W2PPQ1 181 aa16.71■□□□□ 0.27
GABPB1-212ENST00000615671 OR2M5A3KFT3 312 aa16.71■□□□□ 0.27
GABPB1-212ENST00000615671 RAB19A4D1S5 217 aa16.71■□□□□ 0.27
GABPB1-212ENST00000615671 CDK2AP1O14519 115 aa16.71■□□□□ 0.27
GABPB1-212ENST00000615671 NTN1O95631 604 aa16.71■□□□□ 0.27
GABPB1-212ENST00000615671 RHNO1Q9BSD3 238 aa16.71■□□□□ 0.27
GABPB1-212ENST00000615671 RFPL4AA6NLU0 287 aa16.71■□□□□ 0.26
GABPB1-212ENST00000615671 RFPL4AL1F8VTS6 287 aa16.71■□□□□ 0.26
GABPB1-212ENST00000615671 F2RL2O00254 374 aa16.71■□□□□ 0.26
GABPB1-212ENST00000615671 ST8SIA5O15466 376 aa16.71■□□□□ 0.26
GABPB1-212ENST00000615671 SULT1A3P0DMM9 295 aa16.71■□□□□ 0.26
GABPB1-212ENST00000615671 SULT1A4P0DMN0 295 aa16.71■□□□□ 0.26
GABPB1-212ENST00000615671 WBP1LQ9NX94 342 aa16.71■□□□□ 0.26
GABPB1-212ENST00000615671 FNDC7Q5VTL7 733 aa16.7■□□□□ 0.26
GABPB1-212ENST00000615671 RND1Q92730 232 aa16.7■□□□□ 0.26
GABPB1-212ENST00000615671 LINC00615Q96LM1 132 aaPredicted RBP16.7■□□□□ 0.26
GABPB1-212ENST00000615671 LSM2Q9Y333 95 aaKnown RBP16.7■□□□□ 0.26
GABPB1-212ENST00000615671 ZNF716A6NP11 495 aa16.7■□□□□ 0.26
GABPB1-212ENST00000615671 TNFSF14O43557 240 aa16.7■□□□□ 0.26
GABPB1-212ENST00000615671 LPAR6P43657 344 aa16.7■□□□□ 0.26
GABPB1-212ENST00000615671 CRISPLD2Q9H0B8 497 aa16.7■□□□□ 0.26
GABPB1-212ENST00000615671 IGHV3OR15-7A0A075B7D8 119 aa16.7■□□□□ 0.26
GABPB1-212ENST00000615671 GATCO43716 136 aaKnown RBP16.7■□□□□ 0.26
GABPB1-212ENST00000615671 OR4A8P0C604 315 aa16.7■□□□□ 0.26
GABPB1-212ENST00000615671 TPPP2P59282 170 aa16.7■□□□□ 0.26
GABPB1-212ENST00000615671 ISL1P61371 349 aa16.7■□□□□ 0.26
GABPB1-212ENST00000615671 GPNMBQ14956 572 aa16.7■□□□□ 0.26
GABPB1-212ENST00000615671 FFAR4Q5NUL3 377 aa16.7■□□□□ 0.26
GABPB1-212ENST00000615671 TMEM56Q96MV1 263 aa16.7■□□□□ 0.26
GABPB1-212ENST00000615671 AHDC1Q5TGY3 1603 aaPredicted RBP16.7■□□□□ 0.26
GABPB1-212ENST00000615671 MS4A18H0YCH9 400 aa16.7■□□□□ 0.26
GABPB1-212ENST00000615671 EPHA8P29322 1005 aaPredicted RBP16.7■□□□□ 0.26
GABPB1-212ENST00000615671 MS4A18Q3C1V0 323 aa16.7■□□□□ 0.26
GABPB1-212ENST00000615671 GABARAPL1Q9H0R8 117 aa16.7■□□□□ 0.26
GABPB1-212ENST00000615671 UFC1Q9Y3C8 167 aa16.7■□□□□ 0.26
GABPB1-212ENST00000615671 KIF13AQ9H1H9 1805 aa16.7■□□□□ 0.26
GABPB1-212ENST00000615671 IGLV3-25P01717 112 aa16.7■□□□□ 0.26
GABPB1-212ENST00000615671 PRRX1P54821 245 aa16.7■□□□□ 0.26
GABPB1-212ENST00000615671 NCR3LG1Q68D85 454 aa16.7■□□□□ 0.26
GABPB1-212ENST00000615671 DOK1Q99704 481 aa16.7■□□□□ 0.26
GABPB1-212ENST00000615671 ZNF416Q9BWM5 594 aa16.7■□□□□ 0.26
GABPB1-212ENST00000615671 NXF2Q9GZY0 626 aaKnown RBP16.7■□□□□ 0.26
GABPB1-212ENST00000615671 LHX9Q9NQ69 397 aa16.7■□□□□ 0.26
GABPB1-212ENST00000615671 A0A1B0GTH9 108 aa16.69■□□□□ 0.26
GABPB1-212ENST00000615671 TUBAL3A6NHL2 446 aa16.69■□□□□ 0.26
GABPB1-212ENST00000615671 PMCHP20382 165 aa16.69■□□□□ 0.26
GABPB1-212ENST00000615671 EIF3IQ13347 325 aaKnown RBP16.69■□□□□ 0.26
GABPB1-212ENST00000615671 TRA2AQ13595 282 aaKnown RBP eCLIP16.69■□□□□ 0.26
GABPB1-212ENST00000615671 C4orf45Q96LM5 186 aa16.69■□□□□ 0.26
GABPB1-212ENST00000615671 SHROOM3Q8TF72 1996 aa16.69■□□□□ 0.26
GABPB1-212ENST00000615671 ZNF683Q8IZ20 524 aa16.69■□□□□ 0.26
GABPB1-212ENST00000615671 OR4C16Q8NGL9 310 aa16.69■□□□□ 0.26
GABPB1-212ENST00000615671 OR13G1Q8NGZ3 307 aa16.69■□□□□ 0.26
GABPB1-212ENST00000615671 ARHGAP5-AS1Q96IT6 56 aa16.69■□□□□ 0.26
GABPB1-212ENST00000615671 C2orf50Q96LR7 162 aa16.69■□□□□ 0.26
GABPB1-212ENST00000615671 IL36GQ9NZH8 169 aa16.69■□□□□ 0.26
GABPB1-212ENST00000615671 A0A1B0GUL6 1792 aa16.69■□□□□ 0.26
GABPB1-212ENST00000615671 C6orf201Q7Z4U5 140 aa16.69■□□□□ 0.26
GABPB1-212ENST00000615671 LYG2Q86SG7 212 aa16.69■□□□□ 0.26
GABPB1-212ENST00000615671 NAAAQ02083 359 aa16.69■□□□□ 0.26
GABPB1-212ENST00000615671 GABARAPL3Q9BY60 117 aa16.69■□□□□ 0.26
GABPB1-212ENST00000615671 AUP1Q9Y679 476 aa16.69■□□□□ 0.26
GABPB1-212ENST00000615671 GIPP09681 153 aaPredicted RBP16.68■□□□□ 0.26
GABPB1-212ENST00000615671 INSL4Q14641 139 aa16.68■□□□□ 0.26
GABPB1-212ENST00000615671 PLCH1Q4KWH8 1693 aa16.68■□□□□ 0.26
GABPB1-212ENST00000615671 PTOV1Q86YD1 416 aa16.68■□□□□ 0.26
GABPB1-212ENST00000615671 KIAA1958Q8N8K9 716 aa16.68■□□□□ 0.26
GABPB1-212ENST00000615671 OR4D9Q8NGE8 314 aa16.68■□□□□ 0.26
GABPB1-212ENST00000615671 OR8B3Q8NGG8 313 aa16.68■□□□□ 0.26
GABPB1-212ENST00000615671 OR8B2Q96RD0 313 aa16.68■□□□□ 0.26
GABPB1-212ENST00000615671 CDK5RAP2Q96SN8 1893 aa16.68■□□□□ 0.26
GABPB1-212ENST00000615671 MBP02144 154 aa16.68■□□□□ 0.26
GABPB1-212ENST00000615671 SUMO3P55854 103 aaPredicted RBP16.68■□□□□ 0.26
GABPB1-212ENST00000615671 ACVR1Q04771 509 aa16.68■□□□□ 0.26
GABPB1-212ENST00000615671 TMEM215Q68D42 235 aa16.68■□□□□ 0.26
GABPB1-212ENST00000615671 CDK5Q00535 292 aa16.68■□□□□ 0.26
GABPB1-212ENST00000615671 TAAR5O14804 337 aa16.68■□□□□ 0.26
GABPB1-212ENST00000615671 OXA1LQ15070 435 aa16.68■□□□□ 0.26
GABPB1-212ENST00000615671 FAM122BQ7Z309 247 aa16.68■□□□□ 0.26
GABPB1-212ENST00000615671 C9orf172C9J069 976 aa16.68■□□□□ 0.26
GABPB1-212ENST00000615671 ENDOGQ14249 297 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms