RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 MNDAP41218 407 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 CLDN12P56749 244 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 PITPNAQ00169 270 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 ASAH1Q13510 395 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 NKPD1Q17RQ9 610 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 HACD4Q5VWC8 232 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 MBNL2Q5VZF2 373 aaKnown RBP8.63□□□□□ -1.03
UPF1-213ENST00000601981 TRIQKQ629K1 86 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 MRPL21Q7Z2W9 205 aaKnown RBP8.63□□□□□ -1.03
UPF1-213ENST00000601981 LYPD6Q86Y78 171 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 CMTM4Q8IZR5 234 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 OR4M2Q8NGB6 313 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 OR51A2Q8NGJ7 313 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 SLC25A40Q8TBP6 338 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 SLC25A28Q96A46 364 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 LYZL4Q96KX0 146 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 SYT3Q9BQG1 590 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 UQCC2Q9BRT2 126 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 TRAF4Q9BUZ4 470 aaPredicted RBP8.63□□□□□ -1.03
UPF1-213ENST00000601981 OR2J1Q9GZK6 312 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 RGCCQ9H4X1 137 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 PLEKHA1Q9HB21 404 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 TMEM138Q9NPI0 162 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 TBC1D24Q9ULP9 559 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 N6AMT1Q9Y5N5 214 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 CHD3Q12873 2000 aaKnown RBP8.63□□□□□ -1.03
UPF1-213ENST00000601981 OTOGQ6ZRI0 2925 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 IGLV3-9A0A075B6K5 115 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 LOC100289279A0A1B0GTE1 492 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 C5orf63A6NC05 138 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 M0R233 179 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 CTDSPLO15194 276 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 SULT1B1O43704 296 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 TIMM8AO60220 97 aaPredicted RBP8.62□□□□□ -1.03
UPF1-213ENST00000601981 ALX3O95076 343 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 NGFP01138 241 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 ALDOBP05062 364 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 SOD3P08294 240 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 RAC2P15153 192 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 HTR2CP28335 458 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 PPOXP50336 477 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 ART1P52961 327 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 GFOD2Q3B7J2 385 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 SNAI3Q3KNW1 292 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 SPATA46Q5T0L3 261 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 FBXW12Q6X9E4 464 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 COLCA1Q6ZS62 124 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 UTS2BQ765I0 119 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 NAA40Q86UY6 237 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 OR13C9Q8NGT0 318 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 KLF14Q8TD94 323 aaPredicted RBP8.62□□□□□ -1.03
UPF1-213ENST00000601981 C15orf40Q8WUR7 153 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 PP6455Q8WZ26 134 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 NRGNQ92686 78 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 ITFG2Q969R8 447 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 FAM3DQ96BQ1 224 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 HAVCR1Q96D42 359 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 MBD6Q96DN6 1003 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 S100A16Q96FQ6 103 aaKnown RBP8.62□□□□□ -1.03
UPF1-213ENST00000601981 MARS2Q96GW9 593 aaKnown RBP8.62□□□□□ -1.03
UPF1-213ENST00000601981 SORCS2Q96PQ0 1159 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 SOX7Q9BT81 388 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 CACNG6Q9BXT2 260 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 MRPL37Q9BZE1 423 aaKnown RBP8.62□□□□□ -1.03
UPF1-213ENST00000601981 RAB1BQ9H0U4 201 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 MS4A5Q9H3V2 200 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 METTL17Q9H7H0 456 aaPredicted RBP8.62□□□□□ -1.03
UPF1-213ENST00000601981 BARX1Q9HBU1 254 aaPredicted RBP8.62□□□□□ -1.03
UPF1-213ENST00000601981 RHBDL2Q9NX52 303 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 PTTG3PQ9NZH4 202 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 FZR1Q9UM11 496 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 STARD10Q9Y365 291 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 RHBDD3Q9Y3P4 386 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 CSMD1Q96PZ7 3565 aa8.62□□□□□ -1.03
UPF1-213ENST00000601981 USF3Q68DE3 2245 aa8.61□□□□□ -1.03
UPF1-213ENST00000601981 H7C417 338 aa8.61□□□□□ -1.03
UPF1-213ENST00000601981 GSTZ1O43708 216 aaPredicted RBP8.61□□□□□ -1.03
UPF1-213ENST00000601981 IGHV3-13P01766 116 aa8.61□□□□□ -1.03
UPF1-213ENST00000601981 POU3F4P49335 361 aa8.61□□□□□ -1.03
UPF1-213ENST00000601981 MMP15P51511 669 aa8.61□□□□□ -1.03
UPF1-213ENST00000601981 ERVS71-1P61550 626 aa8.61□□□□□ -1.03
UPF1-213ENST00000601981 MRPS10P82664 201 aaKnown RBP8.61□□□□□ -1.03
UPF1-213ENST00000601981 MADCAM1Q13477 382 aa8.61□□□□□ -1.03
UPF1-213ENST00000601981 SWI5Q1ZZU3 235 aa8.61□□□□□ -1.03
UPF1-213ENST00000601981 DEFB113Q30KQ7 82 aa8.61□□□□□ -1.03
UPF1-213ENST00000601981 GLYATL3Q5SZD4 288 aa8.61□□□□□ -1.03
UPF1-213ENST00000601981 C11orf71Q6IPW1 123 aa8.61□□□□□ -1.03
UPF1-213ENST00000601981 OR5AS1Q8N127 324 aa8.61□□□□□ -1.03
UPF1-213ENST00000601981 FTMTQ8N4E7 242 aa8.61□□□□□ -1.03
UPF1-213ENST00000601981 JAGN1Q8N5M9 183 aa8.61□□□□□ -1.03
UPF1-213ENST00000601981 C19orf18Q8NEA5 215 aa8.61□□□□□ -1.03
UPF1-213ENST00000601981 OR51D1Q8NGF3 324 aa8.61□□□□□ -1.03
UPF1-213ENST00000601981 TRIM63Q969Q1 353 aa8.61□□□□□ -1.03
UPF1-213ENST00000601981 PTX4Q96A99 478 aa8.61□□□□□ -1.03
UPF1-213ENST00000601981 RFT1Q96AA3 541 aa8.61□□□□□ -1.03
UPF1-213ENST00000601981 SGK3Q96BR1 496 aa8.61□□□□□ -1.03
UPF1-213ENST00000601981 REEP6Q96HR9 211 aa8.61□□□□□ -1.03
UPF1-213ENST00000601981 VRK1Q99986 396 aaPredicted RBP8.61□□□□□ -1.03
UPF1-213ENST00000601981 CHST5Q9GZS9 411 aa8.61□□□□□ -1.03
UPF1-213ENST00000601981 LIME1Q9H400 295 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms