RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 DUS3LQ96G46 650 aaKnown RBP13.9□□□□□ -0.18
SCAF1-204ENST00000601038 TEAD3Q99594 435 aa13.9□□□□□ -0.18
SCAF1-204ENST00000601038 MROQ9BYG7 248 aa13.9□□□□□ -0.18
SCAF1-204ENST00000601038 YY1AP1Q9H869 796 aa13.9□□□□□ -0.18
SCAF1-204ENST00000601038 TCF7L1Q9HCS4 588 aa13.9□□□□□ -0.18
SCAF1-204ENST00000601038 MAB21L2Q9Y586 359 aa13.9□□□□□ -0.18
SCAF1-204ENST00000601038 OR5B21A6NL26 309 aa13.89□□□□□ -0.19
SCAF1-204ENST00000601038 PSMD9O00233 223 aa13.89□□□□□ -0.19
SCAF1-204ENST00000601038 ZNF254O75437 659 aa13.89□□□□□ -0.19
SCAF1-204ENST00000601038 ROM1Q03395 351 aa13.89□□□□□ -0.19
SCAF1-204ENST00000601038 RIPPLY1Q0D2K3 151 aa13.89□□□□□ -0.19
SCAF1-204ENST00000601038 SNAPC1Q16533 368 aa13.89□□□□□ -0.19
SCAF1-204ENST00000601038 ZBTB37Q5TC79 503 aa13.89□□□□□ -0.19
SCAF1-204ENST00000601038 THAP5Q7Z6K1 395 aa13.89□□□□□ -0.19
SCAF1-204ENST00000601038 PNKDQ8N490 385 aa13.89□□□□□ -0.19
SCAF1-204ENST00000601038 OR5D13Q8NGL4 314 aa13.89□□□□□ -0.19
SCAF1-204ENST00000601038 AQP3Q92482 292 aa13.89□□□□□ -0.19
SCAF1-204ENST00000601038 UBE2FQ969M7 185 aa13.89□□□□□ -0.19
SCAF1-204ENST00000601038 SDSLQ96GA7 329 aa13.89□□□□□ -0.19
SCAF1-204ENST00000601038 PBOV1Q9GZY1 135 aa13.89□□□□□ -0.19
SCAF1-204ENST00000601038 RASL12Q9NYN1 266 aa13.89□□□□□ -0.19
SCAF1-204ENST00000601038 TVP23BQ9NYZ1 205 aa13.89□□□□□ -0.19
SCAF1-204ENST00000601038 DNAJB9Q9UBS3 223 aa13.89□□□□□ -0.19
SCAF1-204ENST00000601038 ZNF222Q9UK12 451 aa13.89□□□□□ -0.19
SCAF1-204ENST00000601038 SF3B6Q9Y3B4 125 aaKnown RBP13.89□□□□□ -0.19
SCAF1-204ENST00000601038 TMEM14AQ9Y6G1 99 aa13.89□□□□□ -0.19
SCAF1-204ENST00000601038 TRBV23-1A0A0A0MS06 115 aa13.88□□□□□ -0.19
SCAF1-204ENST00000601038 SLC22A31A6NKX4 558 aa13.88□□□□□ -0.19
SCAF1-204ENST00000601038 GSC2O15499 205 aa13.88□□□□□ -0.19
SCAF1-204ENST00000601038 IGLV3-1P01715 115 aa13.88□□□□□ -0.19
SCAF1-204ENST00000601038 CBX1P83916 185 aa13.88□□□□□ -0.19
SCAF1-204ENST00000601038 DMRTC1Q5HYR2 192 aa13.88□□□□□ -0.19
SCAF1-204ENST00000601038 MOB3CQ70IA8 216 aa13.88□□□□□ -0.19
SCAF1-204ENST00000601038 COMMD2Q86X83 199 aa13.88□□□□□ -0.19
SCAF1-204ENST00000601038 ZNF679Q8IYX0 411 aa13.88□□□□□ -0.19
SCAF1-204ENST00000601038 BEND2Q8NDZ0 799 aa13.88□□□□□ -0.19
SCAF1-204ENST00000601038 TMEM185AQ8NFB2 350 aa13.88□□□□□ -0.19
SCAF1-204ENST00000601038 OR51E1Q8TCB6 317 aa13.88□□□□□ -0.19
SCAF1-204ENST00000601038 ASB17Q8WXJ9 295 aa13.88□□□□□ -0.19
SCAF1-204ENST00000601038 DNAJC9Q8WXX5 260 aa13.88□□□□□ -0.19
SCAF1-204ENST00000601038 OR8B4Q96RC9 309 aa13.88□□□□□ -0.19
SCAF1-204ENST00000601038 ELL3Q9HB65 397 aaPredicted RBP13.88□□□□□ -0.19
SCAF1-204ENST00000601038 GPR84Q9NQS5 396 aa13.88□□□□□ -0.19
SCAF1-204ENST00000601038 CCDC182A6NF36 153 aa13.87□□□□□ -0.19
SCAF1-204ENST00000601038 ANKRD61A6NGH8 418 aa13.87□□□□□ -0.19
SCAF1-204ENST00000601038 H0YAE9 185 aa13.87□□□□□ -0.19
SCAF1-204ENST00000601038 FKBP6O75344 327 aa13.87□□□□□ -0.19
SCAF1-204ENST00000601038 MTRF1O75570 445 aaKnown RBP13.87□□□□□ -0.19
SCAF1-204ENST00000601038 CRISP1P54107 249 aa13.87□□□□□ -0.19
SCAF1-204ENST00000601038 ZNF829Q3KNS6 432 aaPredicted RBP13.87□□□□□ -0.19
SCAF1-204ENST00000601038 LCN1P1Q5VSP4 162 aa13.87□□□□□ -0.19
SCAF1-204ENST00000601038 HCP5Q6MZN7 132 aa13.87□□□□□ -0.19
SCAF1-204ENST00000601038 HAGHLQ6PII5 290 aaPredicted RBP13.87□□□□□ -0.19
SCAF1-204ENST00000601038 SPATA24Q86W54 205 aa13.87□□□□□ -0.19
SCAF1-204ENST00000601038 NRBF2Q96F24 287 aa13.87□□□□□ -0.19
SCAF1-204ENST00000601038 NUFIP1Q9UHK0 495 aaKnown RBP13.87□□□□□ -0.19
SCAF1-204ENST00000601038 ENPP5Q9UJA9 477 aa13.87□□□□□ -0.19
SCAF1-204ENST00000601038 PIGLQ9Y2B2 252 aa13.87□□□□□ -0.19
SCAF1-204ENST00000601038 TCRBV3S1A0A5B6 114 aa13.86□□□□□ -0.19
SCAF1-204ENST00000601038 PRR32B1ATL7 298 aa13.86□□□□□ -0.19
SCAF1-204ENST00000601038 DHRS3O75911 302 aa13.86□□□□□ -0.19
SCAF1-204ENST00000601038 NRASP01111 189 aa13.86□□□□□ -0.19
SCAF1-204ENST00000601038 MRPL3P09001 348 aaKnown RBP13.86□□□□□ -0.19
SCAF1-204ENST00000601038 FAHP16930 419 aa13.86□□□□□ -0.19
SCAF1-204ENST00000601038 RIDAP52758 137 aaKnown RBP13.86□□□□□ -0.19
SCAF1-204ENST00000601038 FLOT2Q14254 428 aa13.86□□□□□ -0.19
SCAF1-204ENST00000601038 PLCXD3Q63HM9 321 aa13.86□□□□□ -0.19
SCAF1-204ENST00000601038 SLC35E4Q6ICL7 350 aa13.86□□□□□ -0.19
SCAF1-204ENST00000601038 ACP7Q6ZNF0 438 aa13.86□□□□□ -0.19
SCAF1-204ENST00000601038 FAM185AQ8N0U4 392 aa13.86□□□□□ -0.19
SCAF1-204ENST00000601038 PPP1R14AQ96A00 147 aa13.86□□□□□ -0.19
SCAF1-204ENST00000601038 FAM234AQ9H0X4 552 aa13.86□□□□□ -0.19
SCAF1-204ENST00000601038 PPA2Q9H2U2 334 aa13.86□□□□□ -0.19
SCAF1-204ENST00000601038 PAPOLBQ9NRJ5 636 aaKnown RBP13.86□□□□□ -0.19
SCAF1-204ENST00000601038 FBLN5Q9UBX5 448 aa13.86□□□□□ -0.19
SCAF1-204ENST00000601038 COPS3Q9UNS2 423 aa13.86□□□□□ -0.19
SCAF1-204ENST00000601038 RFPL4AA6NLU0 287 aa13.85□□□□□ -0.19
SCAF1-204ENST00000601038 RFPL4AL1F8VTS6 287 aa13.85□□□□□ -0.19
SCAF1-204ENST00000601038 H3BUX3 64 aa13.85□□□□□ -0.19
SCAF1-204ENST00000601038 GYG2O15488 501 aa13.85□□□□□ -0.19
SCAF1-204ENST00000601038 ANGPTL7O43827 346 aa13.85□□□□□ -0.19
SCAF1-204ENST00000601038 TTRP02766 147 aa13.85□□□□□ -0.19
SCAF1-204ENST00000601038 CAPZA1P52907 286 aa13.85□□□□□ -0.19
SCAF1-204ENST00000601038 EGR3Q06889 387 aa13.85□□□□□ -0.19
SCAF1-204ENST00000601038 PTGES3Q15185 160 aaKnown RBP13.85□□□□□ -0.19
SCAF1-204ENST00000601038 SMIM21Q3B7S5 101 aa13.85□□□□□ -0.19
SCAF1-204ENST00000601038 ZNF684Q5T5D7 378 aa13.85□□□□□ -0.19
SCAF1-204ENST00000601038 ZNF561Q8N587 486 aa13.85□□□□□ -0.19
SCAF1-204ENST00000601038 CD177Q8N6Q3 437 aa13.85□□□□□ -0.19
SCAF1-204ENST00000601038 POC1AQ8NBT0 407 aa13.85□□□□□ -0.19
SCAF1-204ENST00000601038 C17orf50Q8WW18 174 aa13.85□□□□□ -0.19
SCAF1-204ENST00000601038 AJUBAQ96IF1 538 aa13.85□□□□□ -0.19
SCAF1-204ENST00000601038 SSX3Q99909 188 aa13.85□□□□□ -0.19
SCAF1-204ENST00000601038 MEGF9Q9H1U4 602 aa13.85□□□□□ -0.19
SCAF1-204ENST00000601038 C19orf12Q9NSK7 152 aa13.85□□□□□ -0.19
SCAF1-204ENST00000601038 IKZF2Q9UKS7 526 aa13.85□□□□□ -0.19
SCAF1-204ENST00000601038 A0A1W2PPH5 198 aa13.84□□□□□ -0.19
SCAF1-204ENST00000601038 PRKYO43930 277 aa13.84□□□□□ -0.19
SCAF1-204ENST00000601038 NOS1APO75052 506 aaPredicted RBP13.84□□□□□ -0.19
SCAF1-204ENST00000601038 SRSF10O75494 262 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms