RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 RGS16O15492 202 aaPredicted RBP3.78□□□□□ -1.8
SMAD4-216ENST00000593223 SSNA1O43805 119 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 ALOX12BO75342 701 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 FRAT2O75474 233 aaPredicted RBP3.78□□□□□ -1.8
SMAD4-216ENST00000593223 ANXA9O76027 345 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 IGHG1P01857 330 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 PCCAP05165 728 aaPredicted RBP3.78□□□□□ -1.8
SMAD4-216ENST00000593223 OR9G9P0C7N8 305 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 GFAPP14136 432 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 MGMTP16455 207 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 CRABP1P29762 137 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 GNRHRP30968 328 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 SSTR5P35346 364 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 YAP1P46937 504 aaKnown RBP3.78□□□□□ -1.8
SMAD4-216ENST00000593223 PPOXP50336 477 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 TMEM33P57088 247 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 AP1S1P61966 158 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 FLI1Q01543 452 aaPredicted RBP3.78□□□□□ -1.8
SMAD4-216ENST00000593223 TLE4Q04727 773 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 RAB40BQ12829 278 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 MLLT11Q13015 90 aaPredicted RBP3.78□□□□□ -1.8
SMAD4-216ENST00000593223 IL18R1Q13478 541 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 AQP6Q13520 282 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 RAB31Q13636 194 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 GNMTQ14749 295 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 TAL2Q16559 108 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 NDUFA9Q16795 377 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 DGUOKQ16854 277 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 ACTL10Q5JWF8 245 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 FAHD2BQ6P2I3 314 aaPredicted RBP3.78□□□□□ -1.8
SMAD4-216ENST00000593223 FAM131AQ6UXB0 335 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 FAM92BQ6ZTR7 304 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 HSD11B1LQ7Z5J1 315 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 HORMAD1Q86X24 394 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 CMTM1Q8IZ96 169 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 ABCA7Q8IZY2 2146 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 LINC00612Q8N6U2 182 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 SAMD12Q8N8I0 201 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 ZSCAN4Q8NAM6 433 aaPredicted RBP3.78□□□□□ -1.8
SMAD4-216ENST00000593223 OR4D9Q8NGE8 314 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 OR5K2Q8NHB8 316 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 CNIH3Q8TBE1 160 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 SYNPRQ8TBG9 265 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 TFB1MQ8WVM0 346 aaKnown RBP3.78□□□□□ -1.8
SMAD4-216ENST00000593223 ITLN1Q8WWA0 313 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 MAFIPQ8WZ33 124 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 OR8D1Q8WZ84 308 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 DLX4Q92988 240 aaPredicted RBP3.78□□□□□ -1.8
SMAD4-216ENST00000593223 MRPL24Q96A35 216 aaKnown RBP3.78□□□□□ -1.8
SMAD4-216ENST00000593223 FAHD2AQ96GK7 314 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 CPXM1Q96SM3 734 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 HBEGFQ99075 208 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 DHRS9Q9BPW9 319 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 ZNF2Q9BSG1 426 aaPredicted RBP3.78□□□□□ -1.8
SMAD4-216ENST00000593223 APOOQ9BUR5 198 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 NAA50Q9GZZ1 169 aaKnown RBP3.78□□□□□ -1.8
SMAD4-216ENST00000593223 PCBD2Q9H0N5 130 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 POMKQ9H5K3 350 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 IKZF5Q9H5V7 419 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 NT5DC2Q9H857 520 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 TMBIM4Q9HC24 238 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 EML4Q9HC35 981 aaKnown RBP3.78□□□□□ -1.8
SMAD4-216ENST00000593223 INIPQ9NRY2 104 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 MCUBQ9NWR8 336 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 TP53TG3Q9ULZ0 132 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 SCML2Q9UQR0 700 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 RCL1Q9Y2P8 373 aaKnown RBP3.78□□□□□ -1.8
SMAD4-216ENST00000593223 EXOSC1Q9Y3B2 195 aaKnown RBP3.78□□□□□ -1.8
SMAD4-216ENST00000593223 OARD1Q9Y530 152 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 TLN1Q9Y490 2541 aaKnown RBP3.78□□□□□ -1.8
SMAD4-216ENST00000593223 CSMD1Q96PZ7 3565 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 ASTN1O14525 1302 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 IGLV3-10A0A075B6K4 115 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 A0A087WWV3 80 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 ANKRD20A5PA0PJZ0 165 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 ZNF724A8MTY0 619 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 KPNA3O00505 521 aaPredicted RBP3.77□□□□□ -1.81
SMAD4-216ENST00000593223 PLPP1O14494 284 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 BET1O15155 118 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 SOX15O60248 233 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 DPM1O60762 260 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 MPDU1O75352 247 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 C1orf105O95561 183 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 RAB36O95755 333 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 IFNA16P05015 189 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 NBEAP1P0C6P0 100 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 ABOP16442 354 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 ATP6V1B2P21281 511 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 IDSP22304 550 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 LOXP28300 417 aaPredicted RBP3.77□□□□□ -1.81
SMAD4-216ENST00000593223 DDOSTP39656 456 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 ELK3P41970 407 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 NOVP48745 357 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 ACOT2P49753 483 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 HLCSP50747 726 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 CRISP1P54107 249 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 RPL27P61353 136 aaKnown RBP3.77□□□□□ -1.81
SMAD4-216ENST00000593223 RPL19P84098 196 aaKnown RBP3.77□□□□□ -1.81
SMAD4-216ENST00000593223 ASAH1Q13510 395 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 TRMT5Q32P41 509 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms