RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 ZNF239Q16600 458 aaKnown RBP5.2□□□□□ -1.58
VMP1-208ENST00000588617 TMEM249Q2WGJ8 235 aa5.2□□□□□ -1.58
VMP1-208ENST00000588617 Q6ZSR6 202 aa5.2□□□□□ -1.58
VMP1-208ENST00000588617 ZCCHC24Q8N2G6 241 aaKnown RBP5.2□□□□□ -1.58
VMP1-208ENST00000588617 OR1J4Q8NGS1 313 aa5.2□□□□□ -1.58
VMP1-208ENST00000588617 OR6N1Q8NGY5 312 aa5.2□□□□□ -1.58
VMP1-208ENST00000588617 NELFBQ8WX92 580 aa5.2□□□□□ -1.58
VMP1-208ENST00000588617 SMARCD1Q96GM5 515 aa5.2□□□□□ -1.58
VMP1-208ENST00000588617 CEP170P1Q96L14 293 aa5.2□□□□□ -1.58
VMP1-208ENST00000588617 OR2A5Q96R48 311 aa5.2□□□□□ -1.58
VMP1-208ENST00000588617 OR4K3Q96R72 315 aa5.2□□□□□ -1.58
VMP1-208ENST00000588617 DNAJC27Q9NZQ0 273 aa5.2□□□□□ -1.58
VMP1-208ENST00000588617 OR12D3Q9UGF7 316 aa5.2□□□□□ -1.58
VMP1-208ENST00000588617 PSG11Q9UQ72 335 aa5.2□□□□□ -1.58
VMP1-208ENST00000588617 ADAMTSL3P82987 1691 aa5.2□□□□□ -1.58
VMP1-208ENST00000588617 UNC13AQ9UPW8 1703 aa5.2□□□□□ -1.58
VMP1-208ENST00000588617 GTF3C1Q12789 2109 aa5.2□□□□□ -1.58
VMP1-208ENST00000588617 MTCL1Q9Y4B5 1905 aaKnown RBP5.19□□□□□ -1.58
VMP1-208ENST00000588617 IGKV3D-20A0A0C4DH25 116 aa5.19□□□□□ -1.58
VMP1-208ENST00000588617 KIR2DS1A0A191URI9 304 aa5.19□□□□□ -1.58
VMP1-208ENST00000588617 COCHO43405 550 aa5.19□□□□□ -1.58
VMP1-208ENST00000588617 TLX1NBP0CAT3 122 aa5.19□□□□□ -1.58
VMP1-208ENST00000588617 GTF2H1P32780 548 aa5.19□□□□□ -1.58
VMP1-208ENST00000588617 EMP2P54851 167 aa5.19□□□□□ -1.58
VMP1-208ENST00000588617 PITPNAQ00169 270 aa5.19□□□□□ -1.58
VMP1-208ENST00000588617 EXOC3L4Q17RC7 722 aa5.19□□□□□ -1.58
VMP1-208ENST00000588617 MPV17L2Q567V2 206 aa5.19□□□□□ -1.58
VMP1-208ENST00000588617 LYG1Q8N1E2 194 aa5.19□□□□□ -1.58
VMP1-208ENST00000588617 OR52P1PQ8NH57 321 aa5.19□□□□□ -1.58
VMP1-208ENST00000588617 COQ8AQ8NI60 647 aa5.19□□□□□ -1.58
VMP1-208ENST00000588617 C15orf40Q8WUR7 153 aa5.19□□□□□ -1.58
VMP1-208ENST00000588617 RILPQ96NA2 401 aa5.19□□□□□ -1.58
VMP1-208ENST00000588617 SHCBP1LQ9BZQ2 653 aa5.19□□□□□ -1.58
VMP1-208ENST00000588617 FBXL3Q9UKT7 428 aa5.19□□□□□ -1.58
VMP1-208ENST00000588617 KIF25-AS1Q9Y6Z4 181 aa5.19□□□□□ -1.58
VMP1-208ENST00000588617 MROH2BQ7Z745 1585 aa5.19□□□□□ -1.58
VMP1-208ENST00000588617 PEG3Q9GZU2 1588 aa5.19□□□□□ -1.58
VMP1-208ENST00000588617 KIAA0232Q92628 1395 aa5.18□□□□□ -1.58
VMP1-208ENST00000588617 IGHV5-10-1A0A0J9YXX1 117 aa5.18□□□□□ -1.58
VMP1-208ENST00000588617 A0A1B0GVX0 72 aa5.18□□□□□ -1.58
VMP1-208ENST00000588617 M0R1X1 148 aa5.18□□□□□ -1.58
VMP1-208ENST00000588617 LIN7AO14910 233 aaPredicted RBP5.18□□□□□ -1.58
VMP1-208ENST00000588617 FABP7O15540 132 aa5.18□□□□□ -1.58
VMP1-208ENST00000588617 ADRB3P13945 408 aa5.18□□□□□ -1.58
VMP1-208ENST00000588617 ZNF19P17023 458 aa5.18□□□□□ -1.58
VMP1-208ENST00000588617 PSMB5P28074 263 aa5.18□□□□□ -1.58
VMP1-208ENST00000588617 ERFP50548 548 aa5.18□□□□□ -1.58
VMP1-208ENST00000588617 WNT4P56705 351 aa5.18□□□□□ -1.58
VMP1-208ENST00000588617 PPIDQ08752 370 aaKnown RBP5.18□□□□□ -1.58
VMP1-208ENST00000588617 CEACAM21Q3KPI0 293 aa5.18□□□□□ -1.58
VMP1-208ENST00000588617 RNF212Q495C1 297 aa5.18□□□□□ -1.58
VMP1-208ENST00000588617 MFSD14CQ5VZR4 134 aa5.18□□□□□ -1.58
VMP1-208ENST00000588617 UGT2A3Q6UWM9 527 aa5.18□□□□□ -1.58
VMP1-208ENST00000588617 FAM151BQ6UXP7 276 aa5.18□□□□□ -1.58
VMP1-208ENST00000588617 USP50Q70EL3 339 aaPredicted RBP5.18□□□□□ -1.58
VMP1-208ENST00000588617 CALHM1Q8IU99 346 aa5.18□□□□□ -1.58
VMP1-208ENST00000588617 RNF10Q8N5U6 811 aaKnown RBP5.18□□□□□ -1.58
VMP1-208ENST00000588617 DYNC2LI1Q8TCX1 351 aa5.18□□□□□ -1.58
VMP1-208ENST00000588617 BLNKQ8WV28 456 aa5.18□□□□□ -1.58
VMP1-208ENST00000588617 PRG3Q9Y2Y8 225 aaPredicted RBP5.18□□□□□ -1.58
VMP1-208ENST00000588617 SMARCA4P51532 1647 aa5.18□□□□□ -1.58
VMP1-208ENST00000588617 RAD50Q92878 1312 aa5.18□□□□□ -1.58
VMP1-208ENST00000588617 ZNF233A6NK53 670 aa5.17□□□□□ -1.58
VMP1-208ENST00000588617 TRIM49D1C9J1S8 452 aa5.17□□□□□ -1.58
VMP1-208ENST00000588617 UBDO15205 165 aa5.17□□□□□ -1.58
VMP1-208ENST00000588617 ANGPTL7O43827 346 aa5.17□□□□□ -1.58
VMP1-208ENST00000588617 ZNF861PO60384 105 aa5.17□□□□□ -1.58
VMP1-208ENST00000588617 RAB36O95755 333 aa5.17□□□□□ -1.58
VMP1-208ENST00000588617 LIMS3P0CW19 117 aa5.17□□□□□ -1.58
VMP1-208ENST00000588617 LIMS4P0CW20 117 aa5.17□□□□□ -1.58
VMP1-208ENST00000588617 IGHV1-8P0DP01 117 aa5.17□□□□□ -1.58
VMP1-208ENST00000588617 RHOAP61586 193 aa5.17□□□□□ -1.58
VMP1-208ENST00000588617 SHHQ15465 462 aa5.17□□□□□ -1.58
VMP1-208ENST00000588617 CDKL4Q5MAI5 379 aa5.17□□□□□ -1.58
VMP1-208ENST00000588617 SPINK14Q6IE38 97 aa5.17□□□□□ -1.58
VMP1-208ENST00000588617 WDFY1Q8IWB7 410 aa5.17□□□□□ -1.58
VMP1-208ENST00000588617 C11orf53Q8IXP5 236 aa5.17□□□□□ -1.58
VMP1-208ENST00000588617 DRAM1Q8N682 238 aa5.17□□□□□ -1.58
VMP1-208ENST00000588617 CCNYL1Q8N7R7 359 aa5.17□□□□□ -1.58
VMP1-208ENST00000588617 DNAJB3Q8WWF6 145 aa5.17□□□□□ -1.58
VMP1-208ENST00000588617 ELSPBP1Q96BH3 223 aa5.17□□□□□ -1.58
VMP1-208ENST00000588617 SNF8Q96H20 258 aa5.17□□□□□ -1.58
VMP1-208ENST00000588617 ZNF426Q9BUY5 554 aa5.17□□□□□ -1.58
VMP1-208ENST00000588617 GGTLC1Q9BX51 225 aa5.17□□□□□ -1.58
VMP1-208ENST00000588617 OR52D1Q9H346 318 aa5.17□□□□□ -1.58
VMP1-208ENST00000588617 RPP21Q9H633 154 aaKnown RBP5.17□□□□□ -1.58
VMP1-208ENST00000588617 RDH14Q9HBH5 336 aa5.17□□□□□ -1.58
VMP1-208ENST00000588617 DDX19AQ9NUU7 478 aaKnown RBP5.17□□□□□ -1.58
VMP1-208ENST00000588617 RAB22AQ9UL26 194 aa5.17□□□□□ -1.58
VMP1-208ENST00000588617 ZNF318Q5VUA4 2279 aa5.17□□□□□ -1.58
VMP1-208ENST00000588617 LTBP1Q14766 1721 aa5.17□□□□□ -1.58
VMP1-208ENST00000588617 TRBV6-6A0A0A6YYG2 114 aa5.16□□□□□ -1.58
VMP1-208ENST00000588617 J3QLI3 93 aa5.16□□□□□ -1.58
VMP1-208ENST00000588617 MPZL2O60487 215 aa5.16□□□□□ -1.58
VMP1-208ENST00000588617 CCDC22O60826 627 aa5.16□□□□□ -1.58
VMP1-208ENST00000588617 MT-ND4P03905 459 aa5.16□□□□□ -1.58
VMP1-208ENST00000588617 CDC34P49427 236 aaPredicted RBP5.16□□□□□ -1.58
VMP1-208ENST00000588617 MYL6P60660 151 aa5.16□□□□□ -1.58
VMP1-208ENST00000588617 PMVKQ15126 192 aa5.16□□□□□ -1.58
VMP1-208ENST00000588617 CEACAM16Q2WEN9 425 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms