RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 ASPHD2Q6ICH7 369 aa14.24□□□□□ -0.13
RAB40B-206ENST00000571995 HSD17B11Q8NBQ5 300 aa14.24□□□□□ -0.13
RAB40B-206ENST00000571995 ZBTB44Q8NCP5 570 aa14.24□□□□□ -0.13
RAB40B-206ENST00000571995 OR2V1Q8NHB1 315 aa14.24□□□□□ -0.13
RAB40B-206ENST00000571995 SUCNR1Q9BXA5 334 aa14.24□□□□□ -0.13
RAB40B-206ENST00000571995 FOXJ2Q9P0K8 574 aa14.24□□□□□ -0.13
RAB40B-206ENST00000571995 CHCHD2Q9Y6H1 151 aaPredicted RBP14.24□□□□□ -0.13
RAB40B-206ENST00000571995 RBP2P50120 134 aa14.23□□□□□ -0.13
RAB40B-206ENST00000571995 TLE1Q04724 770 aa14.23□□□□□ -0.13
RAB40B-206ENST00000571995 TIPARPQ7Z3E1 657 aaKnown RBP14.23□□□□□ -0.13
RAB40B-206ENST00000571995 C5orf24Q7Z6I8 188 aa14.23□□□□□ -0.13
RAB40B-206ENST00000571995 SNRPGP15A8MWD9 76 aa14.23□□□□□ -0.13
RAB40B-206ENST00000571995 COX6A1P12074 109 aa14.23□□□□□ -0.13
RAB40B-206ENST00000571995 HIST1H1DP16402 221 aaKnown RBP14.23□□□□□ -0.13
RAB40B-206ENST00000571995 AGTR1P30556 359 aa14.23□□□□□ -0.13
RAB40B-206ENST00000571995 OR6X1Q8NH79 312 aa14.23□□□□□ -0.13
RAB40B-206ENST00000571995 SLAMF9Q96A28 289 aa14.23□□□□□ -0.13
RAB40B-206ENST00000571995 TSPAN9O75954 239 aa14.23□□□□□ -0.13
RAB40B-206ENST00000571995 SLC23A3Q6PIS1 610 aa14.23□□□□□ -0.13
RAB40B-206ENST00000571995 CDH26Q8IXH8 852 aa14.23□□□□□ -0.13
RAB40B-206ENST00000571995 OR56B2PQ8NGI1 322 aa14.23□□□□□ -0.13
RAB40B-206ENST00000571995 APH1AQ96BI3 265 aa14.23□□□□□ -0.13
RAB40B-206ENST00000571995 ZNF581Q9P0T4 197 aa14.23□□□□□ -0.13
RAB40B-206ENST00000571995 DOCK11Q5JSL3 2073 aa14.23□□□□□ -0.13
RAB40B-206ENST00000571995 ANKRD11Q6UB99 2663 aaPredicted RBP14.22□□□□□ -0.13
RAB40B-206ENST00000571995 MPTX1A8MV57 137 aa14.22□□□□□ -0.13
RAB40B-206ENST00000571995 B8ZZF3 427 aa14.22□□□□□ -0.13
RAB40B-206ENST00000571995 ZNF587BE7ETH6 402 aa14.22□□□□□ -0.13
RAB40B-206ENST00000571995 PHF1O43189 567 aaPredicted RBP14.22□□□□□ -0.13
RAB40B-206ENST00000571995 SUMO3P55854 103 aaPredicted RBP14.22□□□□□ -0.13
RAB40B-206ENST00000571995 CLVS2Q5SYC1 327 aa14.22□□□□□ -0.13
RAB40B-206ENST00000571995 TMEM229BQ8NBD8 167 aa14.22□□□□□ -0.13
RAB40B-206ENST00000571995 FAM234AQ9H0X4 552 aa14.22□□□□□ -0.13
RAB40B-206ENST00000571995 PIPOXQ9P0Z9 390 aa14.22□□□□□ -0.13
RAB40B-206ENST00000571995 BOD1L1Q8NFC6 3051 aa14.22□□□□□ -0.13
RAB40B-206ENST00000571995 GTF3C1Q12789 2109 aa14.22□□□□□ -0.13
RAB40B-206ENST00000571995 MGAQ8IWI9 3026 aa14.22□□□□□ -0.13
RAB40B-206ENST00000571995 EML6Q6ZMW3 1958 aa14.22□□□□□ -0.13
RAB40B-206ENST00000571995 AQP7P3A6NL99 342 aa14.22□□□□□ -0.13
RAB40B-206ENST00000571995 GEMIN2O14893 280 aaKnown RBP14.22□□□□□ -0.13
RAB40B-206ENST00000571995 LYZL6O75951 148 aa14.22□□□□□ -0.13
RAB40B-206ENST00000571995 APLNRP35414 380 aa14.22□□□□□ -0.13
RAB40B-206ENST00000571995 RPS16P62249 146 aaKnown RBP14.22□□□□□ -0.13
RAB40B-206ENST00000571995 RAB1AP62820 205 aa14.22□□□□□ -0.13
RAB40B-206ENST00000571995 RAC1P63000 192 aa14.22□□□□□ -0.13
RAB40B-206ENST00000571995 TEX30Q5JUR7 227 aa14.22□□□□□ -0.13
RAB40B-206ENST00000571995 OR2T2Q6IF00 324 aa14.22□□□□□ -0.13
RAB40B-206ENST00000571995 TERB2Q8NHR7 220 aa14.22□□□□□ -0.13
RAB40B-206ENST00000571995 OBP2BQ9NPH6 170 aa14.22□□□□□ -0.13
RAB40B-206ENST00000571995 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.22□□□□□ -0.13
RAB40B-206ENST00000571995 C9orf170A2RU37 121 aa14.22□□□□□ -0.13
RAB40B-206ENST00000571995 HSD17B6O14756 317 aa14.22□□□□□ -0.13
RAB40B-206ENST00000571995 MT-CO3P00414 261 aa14.22□□□□□ -0.13
RAB40B-206ENST00000571995 APOC1P02654 83 aa14.22□□□□□ -0.13
RAB40B-206ENST00000571995 OR5H8P0DN80 308 aa14.22□□□□□ -0.13
RAB40B-206ENST00000571995 SELEP16581 610 aa14.22□□□□□ -0.13
RAB40B-206ENST00000571995 FCGR2CP31995 323 aa14.22□□□□□ -0.13
RAB40B-206ENST00000571995 AKR1C3P42330 323 aa14.22□□□□□ -0.13
RAB40B-206ENST00000571995 LYG2Q86SG7 212 aa14.22□□□□□ -0.13
RAB40B-206ENST00000571995 OR1F12Q8NHA8 337 aa14.22□□□□□ -0.13
RAB40B-206ENST00000571995 INTS12Q96CB8 462 aaKnown RBP14.22□□□□□ -0.13
RAB40B-206ENST00000571995 GUCD1Q96NT3 240 aa14.22□□□□□ -0.13
RAB40B-206ENST00000571995 NOTCH3Q9UM47 2321 aa14.21□□□□□ -0.13
RAB40B-206ENST00000571995 H3BP45 60 aa14.21□□□□□ -0.13
RAB40B-206ENST00000571995 HOXD11P31277 338 aaPredicted RBP14.21□□□□□ -0.13
RAB40B-206ENST00000571995 FABP6P51161 128 aa14.21□□□□□ -0.13
RAB40B-206ENST00000571995 SUCLG1P53597 346 aaKnown RBP14.21□□□□□ -0.13
RAB40B-206ENST00000571995 PPA1Q15181 289 aa14.21□□□□□ -0.13
RAB40B-206ENST00000571995 SLC38A6Q8IZM9 456 aa14.21□□□□□ -0.13
RAB40B-206ENST00000571995 ZNF441Q8N8Z8 693 aa14.21□□□□□ -0.13
RAB40B-206ENST00000571995 ST8SIA2Q92186 375 aa14.21□□□□□ -0.13
RAB40B-206ENST00000571995 NUP50Q9UKX7 468 aa14.21□□□□□ -0.13
RAB40B-206ENST00000571995 DSPP15924 2871 aaKnown RBP14.21□□□□□ -0.13
RAB40B-206ENST00000571995 E9PLN8 166 aa14.21□□□□□ -0.13
RAB40B-206ENST00000571995 BPNT1O95861 308 aa14.21□□□□□ -0.13
RAB40B-206ENST00000571995 VAMP2P63027 116 aa14.21□□□□□ -0.13
RAB40B-206ENST00000571995 MC2RQ01718 297 aa14.21□□□□□ -0.13
RAB40B-206ENST00000571995 UBE2V2Q15819 145 aa14.21□□□□□ -0.13
RAB40B-206ENST00000571995 HIKESHIQ53FT3 197 aa14.21□□□□□ -0.13
RAB40B-206ENST00000571995 C17orf78Q8N4C9 275 aa14.21□□□□□ -0.13
RAB40B-206ENST00000571995 LPAR5Q9H1C0 372 aa14.21□□□□□ -0.13
RAB40B-206ENST00000571995 CREBBPQ92793 2442 aa14.21□□□□□ -0.13
RAB40B-206ENST00000571995 F8W036 122 aa14.21□□□□□ -0.14
RAB40B-206ENST00000571995 VAMP5O95183 116 aa14.21□□□□□ -0.14
RAB40B-206ENST00000571995 BLOC1S1P78537 153 aa14.21□□□□□ -0.14
RAB40B-206ENST00000571995 FGL1Q08830 312 aa14.21□□□□□ -0.14
RAB40B-206ENST00000571995 OR13C8Q8NGS7 320 aa14.21□□□□□ -0.14
RAB40B-206ENST00000571995 ADAT1Q9BUB4 502 aaKnown RBP14.21□□□□□ -0.14
RAB40B-206ENST00000571995 ZXDAP98168 799 aa14.2□□□□□ -0.14
RAB40B-206ENST00000571995 RNF166Q96A37 237 aaPredicted RBP14.2□□□□□ -0.14
RAB40B-206ENST00000571995 FBXO17Q96EF6 278 aa14.2□□□□□ -0.14
RAB40B-206ENST00000571995 GPR137Q96N19 417 aa14.2□□□□□ -0.14
RAB40B-206ENST00000571995 SIGLEC12Q96PQ1 595 aa14.2□□□□□ -0.14
RAB40B-206ENST00000571995 SCPEP1Q9HB40 452 aa14.2□□□□□ -0.14
RAB40B-206ENST00000571995 MEMO1Q9Y316 297 aa14.2□□□□□ -0.14
RAB40B-206ENST00000571995 M0R036 132 aa14.2□□□□□ -0.14
RAB40B-206ENST00000571995 AQP8O94778 261 aa14.2□□□□□ -0.14
RAB40B-206ENST00000571995 IL5P05113 134 aa14.2□□□□□ -0.14
RAB40B-206ENST00000571995 DEFB109BQ30KR1 87 aa14.2□□□□□ -0.14
RAB40B-206ENST00000571995 CD300LFQ8TDQ1 290 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms