RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 LGALS9O00182 355 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 COCHO43405 550 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 CHST10O43529 356 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 TDP2O95551 362 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 LSM8O95777 96 aaKnown RBP2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 FADS2O95864 444 aaKnown RBP2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 HPRT1P00492 218 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 IGKV1-17P01599 117 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 IGHV3-11P01762 117 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 ZNF688P0C7X2 276 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 RD3LP0DJH9 198 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 GABRG2P18507 467 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 SYT1P21579 422 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 MAGEA6P43360 314 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 PRLHRP49683 370 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 FABP6P51161 128 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 MAD2L1BPQ15013 274 aaPredicted RBP2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 IGFBP7Q16270 282 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 PTRHD1Q6GMV3 140 aaKnown RBP2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 GUSBP11Q6P575 273 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 BOD1L2Q8IYS8 172 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 ZNF101Q8IZC7 436 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 TMEM256Q8N2U0 113 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 CBR4Q8N4T8 237 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 MIR7-3HGQ8N6C7 128 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 ST20-AS1Q8NBB2 130 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 TTLQ8NG68 377 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 TMEM239Q8WW34 195 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 ANP32BQ92688 251 aaKnown RBP2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 SERPINB11Q96P15 392 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 MED10Q9BTT4 135 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 ZNF717Q9BY31 904 aaPredicted RBP2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 FBXO6Q9NRD1 293 aaPredicted RBP2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 UBIAD1Q9Y5Z9 338 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 V9GYY9 64 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 MROH7Q68CQ1 1323 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.4□□□□□ -2.02
SHCBP1-206ENST00000567698 A0A0A6YYD5 115 aa2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 TRAV19A0A0A6YYK7 116 aa2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 TVP23AA6NH52 213 aa2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 OR5H1A6NKK0 313 aa2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 NDUFC2-KCTD14E9PQ53 114 aa2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 H3BN98 237 aa2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 KLRC4-KLRK1H3BQV0 150 aa2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 PRMT5O14744 637 aaPredicted RBP2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 MPDU1O75352 247 aa2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 ADAP1O75689 374 aa2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 CRTAPO75718 401 aaPredicted RBP2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 CATP04040 527 aaKnown RBP2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 SLC35E2BP0CK96 405 aa2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 CD37P11049 281 aa2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 PFN2P35080 140 aa2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 CDC34P49427 236 aaPredicted RBP2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 CLDN6P56747 220 aa2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 MRPS15P82914 257 aaKnown RBP2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 C2orf80Q0P641 193 aa2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 ITGB3BPQ13352 177 aaPredicted RBP2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 BCL2A1Q16548 175 aa2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 C5orf64Q2M2E5 130 aa2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 FAHD1Q6P587 224 aa2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 ZNF645Q8N7E2 425 aa2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 OR2Y1Q8NGV0 311 aa2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 ITFG1Q8TB96 612 aa2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 RTN4IP1Q8WWV3 396 aaPredicted RBP2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 CDKL2Q92772 493 aa2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 CENPNQ96H22 339 aaPredicted RBP2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 BTN2A3PQ96KV6 586 aa2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 UQCC2Q9BRT2 126 aa2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 TMEM243Q9BU79 118 aa2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 BEX2Q9BXY8 128 aa2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 EXOSC4Q9NPD3 245 aaKnown RBP2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 SLC39A1Q9NY26 324 aa2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 HMGXB4Q9UGU5 601 aa2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 CYB5R1Q9UHQ9 305 aa2.4□□□□□ -2.03
SHCBP1-206ENST00000567698 AQRO60306 1485 aaKnown RBP eCLIP2.39□□□□□ -2.03
SHCBP1-206ENST00000567698 POLR3AO14802 1390 aaPredicted RBP2.39□□□□□ -2.03
SHCBP1-206ENST00000567698 CENPVL3A0A0U1RRI6 287 aa2.39□□□□□ -2.03
SHCBP1-206ENST00000567698 PRAMEF26H0Y7S4 382 aa2.39□□□□□ -2.03
SHCBP1-206ENST00000567698 TNFRSF11BO00300 401 aa2.39□□□□□ -2.03
SHCBP1-206ENST00000567698 ZW10O43264 779 aa2.39□□□□□ -2.03
SHCBP1-206ENST00000567698 SGCEO43556 437 aa2.39□□□□□ -2.03
SHCBP1-206ENST00000567698 MYO1DO94832 1006 aa2.39□□□□□ -2.03
SHCBP1-206ENST00000567698 RNASE2P10153 161 aaKnown RBP2.39□□□□□ -2.03
SHCBP1-206ENST00000567698 S100A5P33763 92 aa2.39□□□□□ -2.03
SHCBP1-206ENST00000567698 UGT2B10P36537 528 aa2.39□□□□□ -2.03
SHCBP1-206ENST00000567698 MYCNOSP40205 109 aa2.39□□□□□ -2.03
SHCBP1-206ENST00000567698 MLF1P58340 268 aa2.39□□□□□ -2.03
SHCBP1-206ENST00000567698 UBE2KP61086 200 aa2.39□□□□□ -2.03
SHCBP1-206ENST00000567698 CYP24A1Q07973 514 aa2.39□□□□□ -2.03
SHCBP1-206ENST00000567698 SLC39A6Q13433 755 aa2.39□□□□□ -2.03
SHCBP1-206ENST00000567698 GNA13Q14344 377 aa2.39□□□□□ -2.03
SHCBP1-206ENST00000567698 MAPRE2Q15555 327 aa2.39□□□□□ -2.03
SHCBP1-206ENST00000567698 ATP6V1FQ16864 119 aa2.39□□□□□ -2.03
SHCBP1-206ENST00000567698 EXOC3L4Q17RC7 722 aa2.39□□□□□ -2.03
SHCBP1-206ENST00000567698 TEX30Q5JUR7 227 aa2.39□□□□□ -2.03
SHCBP1-206ENST00000567698 KPRPQ5T749 579 aaPredicted RBP2.39□□□□□ -2.03
SHCBP1-206ENST00000567698 MFSD14CQ5VZR4 134 aa2.39□□□□□ -2.03
SHCBP1-206ENST00000567698 UNC93AQ86WB7 457 aa2.39□□□□□ -2.03
SHCBP1-206ENST00000567698 PLCZ1Q86YW0 608 aa2.39□□□□□ -2.03
SHCBP1-206ENST00000567698 SLC35G3Q8N808 338 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms