RNA–Protein interactions for RNA: ENST00000565688.5

CLN3-218, Transcript of CLN3, battenin, humanhuman

TSL 3

Gene CLN3, Length 650 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-218ENST00000565688 SNAPC1Q16533 368 aa15.33■□□□□ 0.04
CLN3-218ENST00000565688 ZBTB37Q5TC79 503 aa15.33■□□□□ 0.04
CLN3-218ENST00000565688 LCN1P1Q5VSP4 162 aa15.33■□□□□ 0.04
CLN3-218ENST00000565688 ASPHD2Q6ICH7 369 aa15.33■□□□□ 0.04
CLN3-218ENST00000565688 TRPM8Q7Z2W7 1104 aa15.33■□□□□ 0.04
CLN3-218ENST00000565688 COMMD2Q86X83 199 aa15.33■□□□□ 0.04
CLN3-218ENST00000565688 HS3ST5Q8IZT8 346 aa15.33■□□□□ 0.04
CLN3-218ENST00000565688 OR5D13Q8NGL4 314 aa15.33■□□□□ 0.04
CLN3-218ENST00000565688 ASB17Q8WXJ9 295 aa15.33■□□□□ 0.04
CLN3-218ENST00000565688 DUS3LQ96G46 650 aaKnown RBP15.33■□□□□ 0.04
CLN3-218ENST00000565688 TEAD3Q99594 435 aa15.33■□□□□ 0.04
CLN3-218ENST00000565688 RASL12Q9NYN1 266 aa15.33■□□□□ 0.04
CLN3-218ENST00000565688 DNAJB9Q9UBS3 223 aa15.33■□□□□ 0.04
CLN3-218ENST00000565688 SF3B6Q9Y3B4 125 aaKnown RBP15.33■□□□□ 0.04
CLN3-218ENST00000565688 IGKV1D-17A0A075B6S4 117 aa15.32■□□□□ 0.04
CLN3-218ENST00000565688 A0A1W2PRD5 423 aa15.32■□□□□ 0.04
CLN3-218ENST00000565688 A0A1W2PRF3 423 aa15.32■□□□□ 0.04
CLN3-218ENST00000565688 A0A1W2PRM7 423 aa15.32■□□□□ 0.04
CLN3-218ENST00000565688 PSG2P11465 335 aa15.32■□□□□ 0.04
CLN3-218ENST00000565688 PRKACGP22612 351 aa15.32■□□□□ 0.04
CLN3-218ENST00000565688 HCCSP53701 268 aa15.32■□□□□ 0.04
CLN3-218ENST00000565688 PRB3Q04118 309 aaPredicted RBP15.32■□□□□ 0.04
CLN3-218ENST00000565688 FLOT2Q14254 428 aa15.32■□□□□ 0.04
CLN3-218ENST00000565688 ZNF829Q3KNS6 432 aaPredicted RBP15.32■□□□□ 0.04
CLN3-218ENST00000565688 CEP78Q5JTW2 689 aa15.32■□□□□ 0.04
CLN3-218ENST00000565688 TMEM236Q5W0B7 351 aa15.32■□□□□ 0.04
CLN3-218ENST00000565688 SPATA24Q86W54 205 aa15.32■□□□□ 0.04
CLN3-218ENST00000565688 ZNF679Q8IYX0 411 aa15.32■□□□□ 0.04
CLN3-218ENST00000565688 AQP3Q92482 292 aa15.32■□□□□ 0.04
CLN3-218ENST00000565688 SDSLQ96GA7 329 aa15.32■□□□□ 0.04
CLN3-218ENST00000565688 PBOV1Q9GZY1 135 aa15.32■□□□□ 0.04
CLN3-218ENST00000565688 TVP23BQ9NYZ1 205 aa15.32■□□□□ 0.04
CLN3-218ENST00000565688 ZNF222Q9UK12 451 aa15.32■□□□□ 0.04
CLN3-218ENST00000565688 SLC22A31A6NKX4 558 aa15.31■□□□□ 0.04
CLN3-218ENST00000565688 H0YAE9 185 aa15.31■□□□□ 0.04
CLN3-218ENST00000565688 MTRF1O75570 445 aaKnown RBP15.31■□□□□ 0.04
CLN3-218ENST00000565688 TFF1P04155 84 aa15.31■□□□□ 0.04
CLN3-218ENST00000565688 DLX1P56177 255 aa15.31■□□□□ 0.04
CLN3-218ENST00000565688 CBX1P83916 185 aa15.31■□□□□ 0.04
CLN3-218ENST00000565688 PLCXD3Q63HM9 321 aa15.31■□□□□ 0.04
CLN3-218ENST00000565688 ZNRF1Q8ND25 227 aa15.31■□□□□ 0.04
CLN3-218ENST00000565688 BEND2Q8NDZ0 799 aa15.31■□□□□ 0.04
CLN3-218ENST00000565688 TMEM185AQ8NFB2 350 aa15.31■□□□□ 0.04
CLN3-218ENST00000565688 OR51E1Q8TCB6 317 aa15.31■□□□□ 0.04
CLN3-218ENST00000565688 NRBF2Q96F24 287 aa15.31■□□□□ 0.04
CLN3-218ENST00000565688 OR8B4Q96RC9 309 aa15.31■□□□□ 0.04
CLN3-218ENST00000565688 FAM234AQ9H0X4 552 aa15.31■□□□□ 0.04
CLN3-218ENST00000565688 GPR84Q9NQS5 396 aa15.31■□□□□ 0.04
CLN3-218ENST00000565688 PAPOLBQ9NRJ5 636 aaKnown RBP15.31■□□□□ 0.04
CLN3-218ENST00000565688 NUFIP1Q9UHK0 495 aaKnown RBP15.31■□□□□ 0.04
CLN3-218ENST00000565688 ENPP5Q9UJA9 477 aa15.31■□□□□ 0.04
CLN3-218ENST00000565688 PIGLQ9Y2B2 252 aa15.31■□□□□ 0.04
CLN3-218ENST00000565688 MAB21L2Q9Y586 359 aa15.31■□□□□ 0.04
CLN3-218ENST00000565688 A0A1W2PPH5 198 aa15.3■□□□□ 0.04
CLN3-218ENST00000565688 ANKRD61A6NGH8 418 aa15.3■□□□□ 0.04
CLN3-218ENST00000565688 PSMD9O00233 223 aa15.3■□□□□ 0.04
CLN3-218ENST00000565688 FKBP6O75344 327 aa15.3■□□□□ 0.04
CLN3-218ENST00000565688 IGLV3-1P01715 115 aa15.3■□□□□ 0.04
CLN3-218ENST00000565688 MRPL3P09001 348 aaKnown RBP15.3■□□□□ 0.04
CLN3-218ENST00000565688 RIDAP52758 137 aaKnown RBP15.3■□□□□ 0.04
CLN3-218ENST00000565688 CRISP1P54107 249 aa15.3■□□□□ 0.04
CLN3-218ENST00000565688 SMIM21Q3B7S5 101 aa15.3■□□□□ 0.04
CLN3-218ENST00000565688 DNAL1Q4LDG9 190 aa15.3■□□□□ 0.04
CLN3-218ENST00000565688 HAGHLQ6PII5 290 aaPredicted RBP15.3■□□□□ 0.04
CLN3-218ENST00000565688 MOB3CQ70IA8 216 aa15.3■□□□□ 0.04
CLN3-218ENST00000565688 PNKDQ8N490 385 aa15.3■□□□□ 0.04
CLN3-218ENST00000565688 PRRG3Q9BZD7 231 aa15.3■□□□□ 0.04
CLN3-218ENST00000565688 CMYA5Q8N3K9 4069 aa15.3■□□□□ 0.04
CLN3-218ENST00000565688 CCDC182A6NF36 153 aa15.29■□□□□ 0.04
CLN3-218ENST00000565688 GYG2O15488 501 aa15.29■□□□□ 0.04
CLN3-218ENST00000565688 DHRS3O75911 302 aa15.29■□□□□ 0.04
CLN3-218ENST00000565688 NRASP01111 189 aa15.29■□□□□ 0.04
CLN3-218ENST00000565688 FAHP16930 419 aa15.29■□□□□ 0.04
CLN3-218ENST00000565688 CAPZA1P52907 286 aa15.29■□□□□ 0.04
CLN3-218ENST00000565688 C2orf68Q2NKX9 166 aa15.29■□□□□ 0.04
CLN3-218ENST00000565688 ZNF684Q5T5D7 378 aa15.29■□□□□ 0.04
CLN3-218ENST00000565688 ZNF573Q86YE8 665 aa15.29■□□□□ 0.04
CLN3-218ENST00000565688 FAM185AQ8N0U4 392 aa15.29■□□□□ 0.04
CLN3-218ENST00000565688 POC1AQ8NBT0 407 aa15.29■□□□□ 0.04
CLN3-218ENST00000565688 CNN2Q99439 309 aaKnown RBP15.29■□□□□ 0.04
CLN3-218ENST00000565688 MOB1AQ9H8S9 216 aa15.29■□□□□ 0.04
CLN3-218ENST00000565688 ELL3Q9HB65 397 aaPredicted RBP15.29■□□□□ 0.04
CLN3-218ENST00000565688 IKZF2Q9UKS7 526 aa15.29■□□□□ 0.04
CLN3-218ENST00000565688 TCRBV3S1A0A5B6 114 aa15.28■□□□□ 0.04
CLN3-218ENST00000565688 SLC1A7O00341 560 aa15.28■□□□□ 0.04
CLN3-218ENST00000565688 ANGPTL7O43827 346 aa15.28■□□□□ 0.04
CLN3-218ENST00000565688 ACTR3P61158 418 aa15.28■□□□□ 0.04
CLN3-218ENST00000565688 EGR3Q06889 387 aa15.28■□□□□ 0.04
CLN3-218ENST00000565688 AANATQ16613 207 aa15.28■□□□□ 0.04
CLN3-218ENST00000565688 FAHD1Q6P587 224 aa15.28■□□□□ 0.04
CLN3-218ENST00000565688 ACP7Q6ZNF0 438 aa15.28■□□□□ 0.04
CLN3-218ENST00000565688 ZNF561Q8N587 486 aa15.28■□□□□ 0.04
CLN3-218ENST00000565688 OR51G2Q8NGK0 314 aa15.28■□□□□ 0.04
CLN3-218ENST00000565688 MNTQ99583 582 aa15.28■□□□□ 0.04
CLN3-218ENST00000565688 PPA2Q9H2U2 334 aa15.28■□□□□ 0.04
CLN3-218ENST00000565688 HEXA-AS1Q9H8Q6 139 aa15.28■□□□□ 0.04
CLN3-218ENST00000565688 FBLN5Q9UBX5 448 aa15.28■□□□□ 0.04
CLN3-218ENST00000565688 POLDIP2Q9Y2S7 368 aa15.28■□□□□ 0.04
CLN3-218ENST00000565688 hCG_1809904A0A1W2PP81 198 aa15.27■□□□□ 0.04
CLN3-218ENST00000565688 A0A1W2PPE2 198 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms