RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 COLCA1Q6ZS62 124 aa13.1□□□□□ -0.31
RNF40-205ENST00000563909 ACBD7Q8N6N7 88 aa13.1□□□□□ -0.31
RNF40-205ENST00000563909 OR2V2Q96R30 315 aa13.1□□□□□ -0.31
RNF40-205ENST00000563909 TBX5Q99593 518 aa13.1□□□□□ -0.31
RNF40-205ENST00000563909 Q9H521 79 aa13.1□□□□□ -0.31
RNF40-205ENST00000563909 IKZF2Q9UKS7 526 aa13.1□□□□□ -0.31
RNF40-205ENST00000563909 FAM96BQ9Y3D0 163 aa13.1□□□□□ -0.31
RNF40-205ENST00000563909 DAPL1A0PJW8 107 aa13.09□□□□□ -0.31
RNF40-205ENST00000563909 J3QRE1 110 aa13.09□□□□□ -0.31
RNF40-205ENST00000563909 CYB5R3P00387 301 aaPredicted RBP13.09□□□□□ -0.31
RNF40-205ENST00000563909 MMP9P14780 707 aa13.09□□□□□ -0.31
RNF40-205ENST00000563909 DCTDP32321 178 aa13.09□□□□□ -0.31
RNF40-205ENST00000563909 CX3CR1P49238 355 aa13.09□□□□□ -0.31
RNF40-205ENST00000563909 RIDAP52758 137 aaKnown RBP13.09□□□□□ -0.31
RNF40-205ENST00000563909 NAA40Q86UY6 237 aa13.09□□□□□ -0.31
RNF40-205ENST00000563909 PDZD9Q8IXQ8 264 aa13.09□□□□□ -0.31
RNF40-205ENST00000563909 ZNF420Q8TAQ5 688 aaPredicted RBP13.09□□□□□ -0.31
RNF40-205ENST00000563909 MRPL48Q96GC5 212 aaKnown RBP13.09□□□□□ -0.31
RNF40-205ENST00000563909 WDFY2Q96P53 400 aa13.09□□□□□ -0.31
RNF40-205ENST00000563909 MMP28Q9H239 520 aa13.09□□□□□ -0.31
RNF40-205ENST00000563909 INPP5EQ9NRR6 644 aa13.09□□□□□ -0.31
RNF40-205ENST00000563909 PLCXD1Q9NUJ7 323 aa13.09□□□□□ -0.31
RNF40-205ENST00000563909 STARD10Q9Y365 291 aa13.09□□□□□ -0.31
RNF40-205ENST00000563909 LRP12Q9Y561 859 aa13.09□□□□□ -0.31
RNF40-205ENST00000563909 SACSQ9NZJ4 4579 aa13.09□□□□□ -0.31
RNF40-205ENST00000563909 WI2-2373I1.2A0A1W2PRP0 233 aa13.08□□□□□ -0.32
RNF40-205ENST00000563909 ACOD1A6NK06 481 aa13.08□□□□□ -0.32
RNF40-205ENST00000563909 IFNL4K9M1U5 179 aa13.08□□□□□ -0.32
RNF40-205ENST00000563909 PSMD9O00233 223 aa13.08□□□□□ -0.32
RNF40-205ENST00000563909 SULT1C4O75897 302 aa13.08□□□□□ -0.32
RNF40-205ENST00000563909 KRT8P05787 483 aa13.08□□□□□ -0.32
RNF40-205ENST00000563909 ANXA2P07355 339 aaKnown RBP13.08□□□□□ -0.32
RNF40-205ENST00000563909 KITLGP21583 273 aa13.08□□□□□ -0.32
RNF40-205ENST00000563909 ZNF85Q03923 595 aa13.08□□□□□ -0.32
RNF40-205ENST00000563909 MALLQ13021 153 aa13.08□□□□□ -0.32
RNF40-205ENST00000563909 ZNF404Q494X3 552 aa13.08□□□□□ -0.32
RNF40-205ENST00000563909 C6orf141Q5SZD1 244 aa13.08□□□□□ -0.32
RNF40-205ENST00000563909 LYPD2Q6UXB3 125 aa13.08□□□□□ -0.32
RNF40-205ENST00000563909 PLEKHG7Q6ZR37 379 aa13.08□□□□□ -0.32
RNF40-205ENST00000563909 C1orf122Q6ZSJ8 110 aa13.08□□□□□ -0.32
RNF40-205ENST00000563909 BPIFB6Q8NFQ5 453 aa13.08□□□□□ -0.32
RNF40-205ENST00000563909 OR52I1Q8NGK6 324 aa13.08□□□□□ -0.32
RNF40-205ENST00000563909 R3HDM4Q96D70 268 aa13.08□□□□□ -0.32
RNF40-205ENST00000563909 CMBLQ96DG6 245 aa13.08□□□□□ -0.32
RNF40-205ENST00000563909 B9D2Q9BPU9 175 aa13.08□□□□□ -0.32
RNF40-205ENST00000563909 TTTY10Q9BZA0 68 aa13.08□□□□□ -0.32
RNF40-205ENST00000563909 POFUT1Q9H488 388 aa13.08□□□□□ -0.32
RNF40-205ENST00000563909 FGF20Q9NP95 211 aaPredicted RBP13.08□□□□□ -0.32
RNF40-205ENST00000563909 CNOT2Q9NZN8 540 aaKnown RBP13.08□□□□□ -0.32
RNF40-205ENST00000563909 EFCAB10A6NFE3 127 aa13.07□□□□□ -0.32
RNF40-205ENST00000563909 METTL15A6NJ78 407 aa13.07□□□□□ -0.32
RNF40-205ENST00000563909 PRR32B1ATL7 298 aa13.07□□□□□ -0.32
RNF40-205ENST00000563909 C3orf84H3BNL1 204 aa13.07□□□□□ -0.32
RNF40-205ENST00000563909 FAM20BO75063 409 aa13.07□□□□□ -0.32
RNF40-205ENST00000563909 IGHA1P01876 353 aa13.07□□□□□ -0.32
RNF40-205ENST00000563909 PIPP12273 146 aaPredicted RBP13.07□□□□□ -0.32
RNF40-205ENST00000563909 IGLL1P15814 213 aa13.07□□□□□ -0.32
RNF40-205ENST00000563909 DCKP27707 260 aa13.07□□□□□ -0.32
RNF40-205ENST00000563909 EFNB2P52799 333 aa13.07□□□□□ -0.32
RNF40-205ENST00000563909 ZNF121P58317 390 aaPredicted RBP13.07□□□□□ -0.32
RNF40-205ENST00000563909 PSMA6P60900 246 aaKnown RBP13.07□□□□□ -0.32
RNF40-205ENST00000563909 EMX1Q04741 257 aaPredicted RBP13.07□□□□□ -0.32
RNF40-205ENST00000563909 MED21Q13503 144 aa13.07□□□□□ -0.32
RNF40-205ENST00000563909 ZNF829Q3KNS6 432 aaPredicted RBP13.07□□□□□ -0.32
RNF40-205ENST00000563909 METTL11BQ5VVY1 283 aa13.07□□□□□ -0.32
RNF40-205ENST00000563909 LAIR2Q6ISS4 152 aa13.07□□□□□ -0.32
RNF40-205ENST00000563909 SSX6Q7RTT6 188 aa13.07□□□□□ -0.32
RNF40-205ENST00000563909 KCTD20Q7Z5Y7 419 aa13.07□□□□□ -0.32
RNF40-205ENST00000563909 EGFL6Q8IUX8 553 aa13.07□□□□□ -0.32
RNF40-205ENST00000563909 PIP4P2Q8N4L2 257 aa13.07□□□□□ -0.32
RNF40-205ENST00000563909 KLHDC1Q8N7A1 406 aa13.07□□□□□ -0.32
RNF40-205ENST00000563909 YIPF7Q8N8F6 280 aa13.07□□□□□ -0.32
RNF40-205ENST00000563909 OR52H1Q8NGJ2 320 aa13.07□□□□□ -0.32
RNF40-205ENST00000563909 GGHQ92820 318 aa13.07□□□□□ -0.32
RNF40-205ENST00000563909 CNBD2Q96M20 576 aa13.07□□□□□ -0.32
RNF40-205ENST00000563909 JAM3Q9BX67 310 aa13.07□□□□□ -0.32
RNF40-205ENST00000563909 PPA2Q9H2U2 334 aa13.07□□□□□ -0.32
RNF40-205ENST00000563909 SCN3BQ9NY72 215 aa13.07□□□□□ -0.32
RNF40-205ENST00000563909 PTTG3PQ9NZH4 202 aa13.07□□□□□ -0.32
RNF40-205ENST00000563909 MRM2Q9UI43 246 aaKnown RBP13.07□□□□□ -0.32
RNF40-205ENST00000563909 MYRFQ9Y2G1 1151 aa13.07□□□□□ -0.32
RNF40-205ENST00000563909 PCDHGB5Q9Y5G0 923 aa13.07□□□□□ -0.32
RNF40-205ENST00000563909 N6AMT1Q9Y5N5 214 aa13.07□□□□□ -0.32
RNF40-205ENST00000563909 TMEM269A0A1B0GVZ9 245 aa13.06□□□□□ -0.32
RNF40-205ENST00000563909 RNASEK-C17orf49H0YIS7 233 aa13.06□□□□□ -0.32
RNF40-205ENST00000563909 XRCC2O43543 280 aa13.06□□□□□ -0.32
RNF40-205ENST00000563909 DENRO43583 198 aaKnown RBP13.06□□□□□ -0.32
RNF40-205ENST00000563909 LIPFP07098 398 aa13.06□□□□□ -0.32
RNF40-205ENST00000563909 ACTA2P62736 377 aa13.06□□□□□ -0.32
RNF40-205ENST00000563909 ACTG2P63267 376 aa13.06□□□□□ -0.32
RNF40-205ENST00000563909 GALEQ14376 348 aa13.06□□□□□ -0.32
RNF40-205ENST00000563909 CDONQ4KMG0 1287 aa13.06□□□□□ -0.32
RNF40-205ENST00000563909 FAM201AQ5SY85 155 aa13.06□□□□□ -0.32
RNF40-205ENST00000563909 ZNF684Q5T5D7 378 aa13.06□□□□□ -0.32
RNF40-205ENST00000563909 CD276Q5ZPR3 534 aa13.06□□□□□ -0.32
RNF40-205ENST00000563909 C11orf88Q6PI97 169 aa13.06□□□□□ -0.32
RNF40-205ENST00000563909 FBXW12Q6X9E4 464 aa13.06□□□□□ -0.32
RNF40-205ENST00000563909 ZNF841Q6ZN19 808 aa13.06□□□□□ -0.32
RNF40-205ENST00000563909 FAM57BQ71RH2 274 aa13.06□□□□□ -0.32
RNF40-205ENST00000563909 FAM220AQ7Z4H9 259 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms