RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 CANT1Q8WVQ1 401 aa9.5□□□□□ -0.89
USP3-220ENST00000561381 PPP1R14AQ96A00 147 aa9.5□□□□□ -0.89
USP3-220ENST00000561381 MED30Q96HR3 178 aa9.5□□□□□ -0.89
USP3-220ENST00000561381 AJUBAQ96IF1 538 aa9.5□□□□□ -0.89
USP3-220ENST00000561381 LRGUKQ96M69 825 aa9.5□□□□□ -0.89
USP3-220ENST00000561381 TTTY10Q9BZA0 68 aa9.5□□□□□ -0.89
USP3-220ENST00000561381 PPA2Q9H2U2 334 aa9.5□□□□□ -0.89
USP3-220ENST00000561381 OR51I2Q9H344 312 aa9.5□□□□□ -0.89
USP3-220ENST00000561381 METTL8Q9H825 291 aaKnown RBP9.5□□□□□ -0.89
USP3-220ENST00000561381 ABCB9Q9NP78 766 aa9.5□□□□□ -0.89
USP3-220ENST00000561381 SIGLEC9Q9Y336 463 aa9.5□□□□□ -0.89
USP3-220ENST00000561381 MAB21L2Q9Y586 359 aa9.5□□□□□ -0.89
USP3-220ENST00000561381 M0R1W7 72 aa9.49□□□□□ -0.89
USP3-220ENST00000561381 GNGT2O14610 69 aa9.49□□□□□ -0.89
USP3-220ENST00000561381 PRODHO43272 600 aa9.49□□□□□ -0.89
USP3-220ENST00000561381 HMGN1P05114 100 aa9.49□□□□□ -0.89
USP3-220ENST00000561381 MRPL3P09001 348 aaKnown RBP9.49□□□□□ -0.89
USP3-220ENST00000561381 OSMP13725 252 aa9.49□□□□□ -0.89
USP3-220ENST00000561381 CALB2P22676 271 aa9.49□□□□□ -0.89
USP3-220ENST00000561381 TGFBR2P37173 567 aa9.49□□□□□ -0.89
USP3-220ENST00000561381 GNG3P63215 75 aa9.49□□□□□ -0.89
USP3-220ENST00000561381 APOFQ13790 326 aa9.49□□□□□ -0.89
USP3-220ENST00000561381 GK3PQ14409 553 aa9.49□□□□□ -0.89
USP3-220ENST00000561381 SLC35E4Q6ICL7 350 aa9.49□□□□□ -0.89
USP3-220ENST00000561381 C1orf122Q6ZSJ8 110 aa9.49□□□□□ -0.89
USP3-220ENST00000561381 TRPM8Q7Z2W7 1104 aa9.49□□□□□ -0.89
USP3-220ENST00000561381 KRT77Q7Z794 578 aa9.49□□□□□ -0.89
USP3-220ENST00000561381 TMEM185AQ8NFB2 350 aa9.49□□□□□ -0.89
USP3-220ENST00000561381 PPP1R35Q8TAP8 253 aa9.49□□□□□ -0.89
USP3-220ENST00000561381 RORBQ92753 470 aa9.49□□□□□ -0.89
USP3-220ENST00000561381 HIST1H2AAQ96QV6 131 aa9.49□□□□□ -0.89
USP3-220ENST00000561381 THTPAQ9BU02 230 aa9.49□□□□□ -0.89
USP3-220ENST00000561381 NIPAL2Q9H841 368 aa9.49□□□□□ -0.89
USP3-220ENST00000561381 YY1AP1Q9H869 796 aa9.49□□□□□ -0.89
USP3-220ENST00000561381 C19orf12Q9NSK7 152 aa9.49□□□□□ -0.89
USP3-220ENST00000561381 FAM206AQ9NX38 181 aa9.49□□□□□ -0.89
USP3-220ENST00000561381 LAMP5Q9UJQ1 280 aa9.49□□□□□ -0.89
USP3-220ENST00000561381 ZNF222Q9UK12 451 aa9.49□□□□□ -0.89
USP3-220ENST00000561381 TMEM269A0A1B0GVZ9 245 aa9.48□□□□□ -0.89
USP3-220ENST00000561381 CCDC182A6NF36 153 aa9.48□□□□□ -0.89
USP3-220ENST00000561381 ANKRD61A6NGH8 418 aa9.48□□□□□ -0.89
USP3-220ENST00000561381 H3BUX3 64 aa9.48□□□□□ -0.89
USP3-220ENST00000561381 ANGPTL7O43827 346 aa9.48□□□□□ -0.89
USP3-220ENST00000561381 E2F6O75461 281 aa9.48□□□□□ -0.89
USP3-220ENST00000561381 FAHP16930 419 aa9.48□□□□□ -0.89
USP3-220ENST00000561381 MAP2K3P46734 347 aa9.48□□□□□ -0.89
USP3-220ENST00000561381 ERVFRD-1P60508 538 aa9.48□□□□□ -0.89
USP3-220ENST00000561381 MFGE8Q08431 387 aaPredicted RBP9.48□□□□□ -0.89
USP3-220ENST00000561381 ACSM1Q08AH1 577 aa9.48□□□□□ -0.89
USP3-220ENST00000561381 LY6EQ16553 131 aa9.48□□□□□ -0.89
USP3-220ENST00000561381 CEACAM21Q3KPI0 293 aa9.48□□□□□ -0.89
USP3-220ENST00000561381 SLC35D3Q5M8T2 416 aa9.48□□□□□ -0.89
USP3-220ENST00000561381 NCR3LG1Q68D85 454 aa9.48□□□□□ -0.89
USP3-220ENST00000561381 HAGHLQ6PII5 290 aaPredicted RBP9.48□□□□□ -0.89
USP3-220ENST00000561381 MOB3CQ70IA8 216 aa9.48□□□□□ -0.89
USP3-220ENST00000561381 KRT74Q7RTS7 529 aa9.48□□□□□ -0.89
USP3-220ENST00000561381 COMMD2Q86X83 199 aa9.48□□□□□ -0.89
USP3-220ENST00000561381 FAM185AQ8N0U4 392 aa9.48□□□□□ -0.89
USP3-220ENST00000561381 CD177Q8N6Q3 437 aa9.48□□□□□ -0.89
USP3-220ENST00000561381 BEND2Q8NDZ0 799 aa9.48□□□□□ -0.89
USP3-220ENST00000561381 OR5R1Q8NH85 324 aa9.48□□□□□ -0.89
USP3-220ENST00000561381 OR51E1Q8TCB6 317 aa9.48□□□□□ -0.89
USP3-220ENST00000561381 AQP3Q92482 292 aa9.48□□□□□ -0.89
USP3-220ENST00000561381 ZNF488Q96MN9 340 aa9.48□□□□□ -0.89
USP3-220ENST00000561381 TEAD3Q99594 435 aa9.48□□□□□ -0.89
USP3-220ENST00000561381 SSX3Q99909 188 aa9.48□□□□□ -0.89
USP3-220ENST00000561381 GPR84Q9NQS5 396 aa9.48□□□□□ -0.89
USP3-220ENST00000561381 COPS3Q9UNS2 423 aa9.48□□□□□ -0.89
USP3-220ENST00000561381 A0A0U1RQV5 110 aa9.47□□□□□ -0.89
USP3-220ENST00000561381 RFPL4AA6NLU0 287 aa9.47□□□□□ -0.89
USP3-220ENST00000561381 RFPL4AL1F8VTS6 287 aa9.47□□□□□ -0.89
USP3-220ENST00000561381 H0YAE9 185 aa9.47□□□□□ -0.89
USP3-220ENST00000561381 MAGEB4O15481 346 aaPredicted RBP9.47□□□□□ -0.89
USP3-220ENST00000561381 MTRF1O75570 445 aaKnown RBP9.47□□□□□ -0.89
USP3-220ENST00000561381 IGLV3-1P01715 115 aa9.47□□□□□ -0.89
USP3-220ENST00000561381 GABRA5P31644 462 aa9.47□□□□□ -0.89
USP3-220ENST00000561381 CEBPDP49716 269 aaPredicted RBP9.47□□□□□ -0.89
USP3-220ENST00000561381 CAPZA1P52907 286 aa9.47□□□□□ -0.89
USP3-220ENST00000561381 BLMHQ13867 455 aa9.47□□□□□ -0.89
USP3-220ENST00000561381 PLCXD3Q63HM9 321 aa9.47□□□□□ -0.89
USP3-220ENST00000561381 ACP7Q6ZNF0 438 aa9.47□□□□□ -0.89
USP3-220ENST00000561381 THAP5Q7Z6K1 395 aa9.47□□□□□ -0.89
USP3-220ENST00000561381 MKXQ8IYA7 352 aa9.47□□□□□ -0.89
USP3-220ENST00000561381 BATF2Q8N1L9 274 aa9.47□□□□□ -0.89
USP3-220ENST00000561381 PAPD5Q8NDF8 572 aaKnown RBP9.47□□□□□ -0.89
USP3-220ENST00000561381 OR5A2Q8NGI9 324 aa9.47□□□□□ -0.89
USP3-220ENST00000561381 ZNF671Q8TAW3 534 aa9.47□□□□□ -0.89
USP3-220ENST00000561381 SDSLQ96GA7 329 aa9.47□□□□□ -0.89
USP3-220ENST00000561381 YIPF3Q9GZM5 350 aa9.47□□□□□ -0.89
USP3-220ENST00000561381 PBOV1Q9GZY1 135 aa9.47□□□□□ -0.89
USP3-220ENST00000561381 ZNF556Q9HAH1 456 aa9.47□□□□□ -0.89
USP3-220ENST00000561381 SLC25A19Q9HC21 320 aa9.47□□□□□ -0.89
USP3-220ENST00000561381 TVP23BQ9NYZ1 205 aa9.47□□□□□ -0.89
USP3-220ENST00000561381 PIGLQ9Y2B2 252 aa9.47□□□□□ -0.89
USP3-220ENST00000561381 SF3B6Q9Y3B4 125 aaKnown RBP9.47□□□□□ -0.89
USP3-220ENST00000561381 TET2Q6N021 2002 aaPredicted RBP9.46□□□□□ -0.89
USP3-220ENST00000561381 MEGF11A6BM72 1044 aa9.46□□□□□ -0.9
USP3-220ENST00000561381 AQP12BA6NM10 295 aa9.46□□□□□ -0.9
USP3-220ENST00000561381 M0R129 80 aa9.46□□□□□ -0.9
USP3-220ENST00000561381 SYNGR1O43759 233 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms