RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 RTL8AQ9BWD3 113 aa6.09□□□□□ -1.43
ZEB1-223ENST00000561304 CHIAQ9BZP6 476 aa6.09□□□□□ -1.43
ZEB1-223ENST00000561304 YIPF3Q9GZM5 350 aa6.09□□□□□ -1.43
ZEB1-223ENST00000561304 PBOV1Q9GZY1 135 aa6.09□□□□□ -1.43
ZEB1-223ENST00000561304 GABARAPL1Q9H0R8 117 aa6.09□□□□□ -1.43
ZEB1-223ENST00000561304 PRDM13Q9H4Q3 707 aa6.09□□□□□ -1.43
ZEB1-223ENST00000561304 RGCCQ9H4X1 137 aa6.09□□□□□ -1.43
ZEB1-223ENST00000561304 YY1AP1Q9H869 796 aa6.09□□□□□ -1.43
ZEB1-223ENST00000561304 SP140LQ9H930 580 aa6.09□□□□□ -1.43
ZEB1-223ENST00000561304 UNKLQ9H9P5 680 aaKnown RBP6.09□□□□□ -1.43
ZEB1-223ENST00000561304 ZMAT3Q9HA38 289 aaKnown RBP6.09□□□□□ -1.43
ZEB1-223ENST00000561304 ELL3Q9HB65 397 aaPredicted RBP6.09□□□□□ -1.43
ZEB1-223ENST00000561304 ADGRL4Q9HBW9 690 aa6.09□□□□□ -1.43
ZEB1-223ENST00000561304 TRIM36Q9NQ86 728 aa6.09□□□□□ -1.43
ZEB1-223ENST00000561304 GPR84Q9NQS5 396 aa6.09□□□□□ -1.43
ZEB1-223ENST00000561304 KRT84Q9NSB2 600 aa6.09□□□□□ -1.43
ZEB1-223ENST00000561304 RPUSD1Q9UJJ7 312 aaKnown RBP6.09□□□□□ -1.43
ZEB1-223ENST00000561304 MPC1Q9Y5U8 109 aa6.09□□□□□ -1.43
ZEB1-223ENST00000561304 IGHV1-69DA0A0B4J2H0 117 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 A0A0U1RQK1 487 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 A0A0U1RQV5 110 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 ZNF816-ZNF321PA0A0X1KG74 233 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 TMEM210A6NLX4 147 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 ANXA2P2A6NMY6 339 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 ZNF732B4DXR9 585 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 NDUFA2O43678 99 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 APOL3O95236 402 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 IGHV1-69P01742 117 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 TTRP02766 147 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 HOXB6P17509 224 aaKnown RBP6.08□□□□□ -1.44
ZEB1-223ENST00000561304 POLR2IP36954 125 aaKnown RBP6.08□□□□□ -1.44
ZEB1-223ENST00000561304 TGM4P49221 684 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 CXCR4P61073 352 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 ESRRGP62508 458 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 IL5RAQ01344 420 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 ROM1Q03395 351 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 SRSF4Q08170 494 aaKnown RBP6.08□□□□□ -1.44
ZEB1-223ENST00000561304 FOXL1Q12952 345 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 MICBQ29980 383 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 FAM76BQ5HYJ3 339 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 LCN1P1Q5VSP4 162 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 AADACL4Q5VUY2 407 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 METTL11BQ5VVY1 283 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 CD276Q5ZPR3 534 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 ZNF788Q6ZQV5 615 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 KCTD8Q6ZWB6 473 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 MEPCEQ7L2J0 689 aaKnown RBP6.08□□□□□ -1.44
ZEB1-223ENST00000561304 KRT74Q7RTS7 529 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 THAP5Q7Z6K1 395 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 ZNF679Q8IYX0 411 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 PNKDQ8N490 385 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 Q8N7P7 452 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 TCEANCQ8N8B7 351 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 PNLDC1Q8NA58 520 aaKnown RBP6.08□□□□□ -1.44
ZEB1-223ENST00000561304 OR10Z1Q8NGY1 313 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 ANGPTL6Q8NI99 470 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 DNAJC9Q8WXX5 260 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 LRTOMTQ8WZ04 291 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 C12orf43Q96C57 262 aaKnown RBP6.08□□□□□ -1.44
ZEB1-223ENST00000561304 RNF170Q96K19 258 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 ZNF488Q96MN9 340 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 IL4I1Q96RQ9 567 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 CIB1Q99828 191 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 APOL4Q9BPW4 351 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 DCTN5Q9BTE1 182 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 ZNF747Q9BV97 191 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 OR51I2Q9H344 312 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 SIRT7Q9NRC8 400 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 HAO2Q9NYQ3 351 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 ONECUT1Q9UBC0 465 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 DNAJB11Q9UBS4 358 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 NUFIP1Q9UHK0 495 aaKnown RBP6.08□□□□□ -1.44
ZEB1-223ENST00000561304 MRM2Q9UI43 246 aaKnown RBP6.08□□□□□ -1.44
ZEB1-223ENST00000561304 ZNF391Q9UJN7 358 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 ZNF222Q9UK12 451 aa6.08□□□□□ -1.44
ZEB1-223ENST00000561304 IGKV1D-17A0A075B6S4 117 aa6.07□□□□□ -1.44
ZEB1-223ENST00000561304 A0A1B0GTI1 187 aa6.07□□□□□ -1.44
ZEB1-223ENST00000561304 A6NIN4 97 aa6.07□□□□□ -1.44
ZEB1-223ENST00000561304 G3V2T6 193 aa6.07□□□□□ -1.44
ZEB1-223ENST00000561304 RNASEK-C17orf49H0YIS7 233 aa6.07□□□□□ -1.44
ZEB1-223ENST00000561304 H3BSH0 61 aa6.07□□□□□ -1.44
ZEB1-223ENST00000561304 SPRY1O43609 319 aaPredicted RBP6.07□□□□□ -1.44
ZEB1-223ENST00000561304 SYNGR1O43759 233 aa6.07□□□□□ -1.44
ZEB1-223ENST00000561304 IGHV4-59P01825 116 aa6.07□□□□□ -1.44
ZEB1-223ENST00000561304 LIPFP07098 398 aa6.07□□□□□ -1.44
ZEB1-223ENST00000561304 CEBPDP49716 269 aaPredicted RBP6.07□□□□□ -1.44
ZEB1-223ENST00000561304 CEACAM21Q3KPI0 293 aa6.07□□□□□ -1.44
ZEB1-223ENST00000561304 CDONQ4KMG0 1287 aa6.07□□□□□ -1.44
ZEB1-223ENST00000561304 ATPAF1Q5TC12 328 aaPredicted RBP6.07□□□□□ -1.44
ZEB1-223ENST00000561304 NXNL2Q5VZ03 156 aa6.07□□□□□ -1.44
ZEB1-223ENST00000561304 C16orf87Q6PH81 154 aa6.07□□□□□ -1.44
ZEB1-223ENST00000561304 KCTD18Q6PI47 426 aaPredicted RBP6.07□□□□□ -1.44
ZEB1-223ENST00000561304 DEGS2Q6QHC5 323 aa6.07□□□□□ -1.44
ZEB1-223ENST00000561304 ZNF322Q6U7Q0 402 aaPredicted RBP6.07□□□□□ -1.44
ZEB1-223ENST00000561304 FIP1L1Q6UN15 594 aaKnown RBP6.07□□□□□ -1.44
ZEB1-223ENST00000561304 SLC36A1Q7Z2H8 476 aa6.07□□□□□ -1.44
ZEB1-223ENST00000561304 REC114Q7Z4M0 266 aa6.07□□□□□ -1.44
ZEB1-223ENST00000561304 COMMD2Q86X83 199 aa6.07□□□□□ -1.44
ZEB1-223ENST00000561304 SLC35F2Q8IXU6 374 aa6.07□□□□□ -1.44
ZEB1-223ENST00000561304 BATF2Q8N1L9 274 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms