RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 HIST1H2AAQ96QV6 131 aa14.36□□□□□ -0.11
TSPAN3-208ENST00000560514 OR10A2Q9H208 303 aa14.36□□□□□ -0.11
TSPAN3-208ENST00000560514 C19orf12Q9NSK7 152 aa14.36□□□□□ -0.11
TSPAN3-208ENST00000560514 USE1Q9NZ43 259 aa14.36□□□□□ -0.11
TSPAN3-208ENST00000560514 ACTR3BQ9P1U1 418 aa14.36□□□□□ -0.11
TSPAN3-208ENST00000560514 LRP12Q9Y561 859 aa14.36□□□□□ -0.11
TSPAN3-208ENST00000560514 COMMD3-BMI1R4GMX3 469 aa14.36□□□□□ -0.11
TSPAN3-208ENST00000560514 ZNF850A8MQ14 1090 aa14.35□□□□□ -0.11
TSPAN3-208ENST00000560514 C3orf84H3BNL1 204 aa14.35□□□□□ -0.11
TSPAN3-208ENST00000560514 ARG1P05089 322 aa14.35□□□□□ -0.11
TSPAN3-208ENST00000560514 ENTPD1P49961 510 aa14.35□□□□□ -0.11
TSPAN3-208ENST00000560514 SLC25A1P53007 311 aa14.35□□□□□ -0.11
TSPAN3-208ENST00000560514 BLCAPP62952 87 aa14.35□□□□□ -0.11
TSPAN3-208ENST00000560514 PRDX4Q13162 271 aa14.35□□□□□ -0.11
TSPAN3-208ENST00000560514 TMEM95Q3KNT9 176 aa14.35□□□□□ -0.11
TSPAN3-208ENST00000560514 FAM57BQ71RH2 274 aa14.35□□□□□ -0.11
TSPAN3-208ENST00000560514 RNF144BQ7Z419 303 aa14.35□□□□□ -0.11
TSPAN3-208ENST00000560514 TIGD4Q8IY51 512 aa14.35□□□□□ -0.11
TSPAN3-208ENST00000560514 DEFB107AQ8IZN7 70 aa14.35□□□□□ -0.11
TSPAN3-208ENST00000560514 OR4X2Q8NGF9 303 aa14.35□□□□□ -0.11
TSPAN3-208ENST00000560514 OR51L1Q8NGJ5 315 aa14.35□□□□□ -0.11
TSPAN3-208ENST00000560514 MALSU1Q96EH3 234 aa14.35□□□□□ -0.11
TSPAN3-208ENST00000560514 CHID1Q9BWS9 393 aa14.35□□□□□ -0.11
TSPAN3-208ENST00000560514 ARL8BQ9NVJ2 186 aa14.35□□□□□ -0.11
TSPAN3-208ENST00000560514 TBL2Q9Y4P3 447 aaKnown RBP14.35□□□□□ -0.11
TSPAN3-208ENST00000560514 V9GYQ6 96 aa14.35□□□□□ -0.11
TSPAN3-208ENST00000560514 IGKV1D-17A0A075B6S4 117 aa14.34□□□□□ -0.11
TSPAN3-208ENST00000560514 ZNF593O00488 134 aaPredicted RBP14.34□□□□□ -0.11
TSPAN3-208ENST00000560514 RHBDL1O75783 438 aa14.34□□□□□ -0.11
TSPAN3-208ENST00000560514 PSG2P11465 335 aa14.34□□□□□ -0.11
TSPAN3-208ENST00000560514 FMO3P31513 532 aa14.34□□□□□ -0.11
TSPAN3-208ENST00000560514 COL10A1Q03692 680 aa14.34□□□□□ -0.11
TSPAN3-208ENST00000560514 SSX2Q16385 188 aa14.34□□□□□ -0.11
TSPAN3-208ENST00000560514 ZNF782Q6ZMW2 699 aaPredicted RBP14.34□□□□□ -0.11
TSPAN3-208ENST00000560514 RASSF6Q6ZTQ3 369 aa14.34□□□□□ -0.11
TSPAN3-208ENST00000560514 OR52L1Q8NGH7 329 aa14.34□□□□□ -0.11
TSPAN3-208ENST00000560514 OR5P3Q8WZ94 311 aa14.34□□□□□ -0.11
TSPAN3-208ENST00000560514 PIGCQ92535 297 aa14.34□□□□□ -0.11
TSPAN3-208ENST00000560514 RGCCQ9H4X1 137 aa14.34□□□□□ -0.11
TSPAN3-208ENST00000560514 INPP5EQ9NRR6 644 aa14.34□□□□□ -0.11
TSPAN3-208ENST00000560514 DNAJC27Q9NZQ0 273 aa14.34□□□□□ -0.11
TSPAN3-208ENST00000560514 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.34□□□□□ -0.11
TSPAN3-208ENST00000560514 ZMAT5Q9UDW3 170 aaKnown RBP14.34□□□□□ -0.11
TSPAN3-208ENST00000560514 BAIAP2Q9UQB8 552 aa14.34□□□□□ -0.11
TSPAN3-208ENST00000560514 LYVE1Q9Y5Y7 322 aa14.34□□□□□ -0.11
TSPAN3-208ENST00000560514 CDH10Q9Y6N8 788 aa14.34□□□□□ -0.11
TSPAN3-208ENST00000560514 FAM90A8PA6NJQ4 464 aa14.33□□□□□ -0.12
TSPAN3-208ENST00000560514 TNFRSF11BO00300 401 aa14.33□□□□□ -0.12
TSPAN3-208ENST00000560514 LMO1P25800 156 aa14.33□□□□□ -0.12
TSPAN3-208ENST00000560514 MAGEA2P43356 314 aa14.33□□□□□ -0.12
TSPAN3-208ENST00000560514 OR12D2P58182 307 aa14.33□□□□□ -0.12
TSPAN3-208ENST00000560514 TMEM200BQ69YZ2 307 aa14.33□□□□□ -0.12
TSPAN3-208ENST00000560514 ZNF770Q6IQ21 691 aaPredicted RBP14.33□□□□□ -0.12
TSPAN3-208ENST00000560514 LYPD4Q6UWN0 246 aa14.33□□□□□ -0.12
TSPAN3-208ENST00000560514 Q6ZS46 218 aa14.33□□□□□ -0.12
TSPAN3-208ENST00000560514 DYNAPQ8N1N2 210 aa14.33□□□□□ -0.12
TSPAN3-208ENST00000560514 OR13D1Q8NGV5 346 aa14.33□□□□□ -0.12
TSPAN3-208ENST00000560514 ZNF671Q8TAW3 534 aa14.33□□□□□ -0.12
TSPAN3-208ENST00000560514 SDSLQ96GA7 329 aa14.33□□□□□ -0.12
TSPAN3-208ENST00000560514 PGAM5Q96HS1 289 aa14.33□□□□□ -0.12
TSPAN3-208ENST00000560514 C1orf21Q9H246 121 aa14.33□□□□□ -0.12
TSPAN3-208ENST00000560514 MAGIXQ9H6Y5 334 aa14.33□□□□□ -0.12
TSPAN3-208ENST00000560514 YY1AP1Q9H869 796 aa14.33□□□□□ -0.12
TSPAN3-208ENST00000560514 BRD7Q9NPI1 651 aa14.33□□□□□ -0.12
TSPAN3-208ENST00000560514 PCDHGB5Q9Y5G0 923 aa14.33□□□□□ -0.12
TSPAN3-208ENST00000560514 SLC1A7O00341 560 aa14.32□□□□□ -0.12
TSPAN3-208ENST00000560514 GASTP01350 101 aa14.32□□□□□ -0.12
TSPAN3-208ENST00000560514 PSKH1P11801 424 aa14.32□□□□□ -0.12
TSPAN3-208ENST00000560514 CCL3L1P16619 93 aa14.32□□□□□ -0.12
TSPAN3-208ENST00000560514 BLVRAP53004 296 aa14.32□□□□□ -0.12
TSPAN3-208ENST00000560514 ZNF121P58317 390 aaPredicted RBP14.32□□□□□ -0.12
TSPAN3-208ENST00000560514 GNGT1P63211 74 aa14.32□□□□□ -0.12
TSPAN3-208ENST00000560514 EIF2B1Q14232 305 aaKnown RBP14.32□□□□□ -0.12
TSPAN3-208ENST00000560514 GK3PQ14409 553 aa14.32□□□□□ -0.12
TSPAN3-208ENST00000560514 KLHL12Q53G59 568 aa14.32□□□□□ -0.12
TSPAN3-208ENST00000560514 FAM76BQ5HYJ3 339 aa14.32□□□□□ -0.12
TSPAN3-208ENST00000560514 TEX30Q5JUR7 227 aa14.32□□□□□ -0.12
TSPAN3-208ENST00000560514 UNQ9370/PRO34162Q6UXP9 181 aa14.32□□□□□ -0.12
TSPAN3-208ENST00000560514 THAP5Q7Z6K1 395 aa14.32□□□□□ -0.12
TSPAN3-208ENST00000560514 ZDHHC23Q8IYP9 409 aa14.32□□□□□ -0.12
TSPAN3-208ENST00000560514 OR4M1Q8NGD0 313 aa14.32□□□□□ -0.12
TSPAN3-208ENST00000560514 OR2T27Q8NH04 317 aa14.32□□□□□ -0.12
TSPAN3-208ENST00000560514 CAPSLQ8WWF8 208 aa14.32□□□□□ -0.12
TSPAN3-208ENST00000560514 MYDGFQ969H8 173 aa14.32□□□□□ -0.12
TSPAN3-208ENST00000560514 DHRS12A0PJE2 317 aa14.31□□□□□ -0.12
TSPAN3-208ENST00000560514 CCNB2O95067 398 aa14.31□□□□□ -0.12
TSPAN3-208ENST00000560514 AZGP1P25311 298 aaKnown RBP14.31□□□□□ -0.12
TSPAN3-208ENST00000560514 GPM6AP51674 278 aa14.31□□□□□ -0.12
TSPAN3-208ENST00000560514 DYNC1I2Q13409 638 aaKnown RBP14.31□□□□□ -0.12
TSPAN3-208ENST00000560514 DOC2BQ14184 412 aa14.31□□□□□ -0.12
TSPAN3-208ENST00000560514 ZNF561Q8N587 486 aa14.31□□□□□ -0.12
TSPAN3-208ENST00000560514 ZNF511Q8NB15 262 aa14.31□□□□□ -0.12
TSPAN3-208ENST00000560514 NSL1Q96IY1 281 aa14.31□□□□□ -0.12
TSPAN3-208ENST00000560514 BTBD10Q9BSF8 475 aa14.31□□□□□ -0.12
TSPAN3-208ENST00000560514 MCRIP2Q9BUT9 160 aaKnown RBP14.31□□□□□ -0.12
TSPAN3-208ENST00000560514 EGLN3Q9H6Z9 239 aa14.31□□□□□ -0.12
TSPAN3-208ENST00000560514 ZNF222Q9UK12 451 aa14.31□□□□□ -0.12
TSPAN3-208ENST00000560514 B2RBV5 119 aa14.3□□□□□ -0.12
TSPAN3-208ENST00000560514 CST4P01036 141 aa14.3□□□□□ -0.12
TSPAN3-208ENST00000560514 CHRM2P08172 466 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms