RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 C1orf185Q5T7R7 199 aa15.42■□□□□ 0.06
SNX1-208ENST00000559844 MYO7BQ6PIF6 2116 aa15.42■□□□□ 0.06
SNX1-208ENST00000559844 GALNT11Q8NCW6 608 aa15.42■□□□□ 0.06
SNX1-208ENST00000559844 NPRL2Q8WTW4 380 aa15.42■□□□□ 0.06
SNX1-208ENST00000559844 SEC22CQ9BRL7 303 aa15.42■□□□□ 0.06
SNX1-208ENST00000559844 NICN1Q9BSH3 213 aa15.42■□□□□ 0.06
SNX1-208ENST00000559844 BANF2Q9H503 90 aa15.42■□□□□ 0.06
SNX1-208ENST00000559844 SLA2Q9H6Q3 261 aa15.42■□□□□ 0.06
SNX1-208ENST00000559844 CLCF1Q9UBD9 225 aa15.42■□□□□ 0.06
SNX1-208ENST00000559844 FAM215AQ9Y5M1 114 aa15.42■□□□□ 0.06
SNX1-208ENST00000559844 UBE2QL1A1L167 161 aa15.41■□□□□ 0.06
SNX1-208ENST00000559844 AMY2AP04746 511 aa15.41■□□□□ 0.06
SNX1-208ENST00000559844 RLN1P04808 185 aa15.41■□□□□ 0.06
SNX1-208ENST00000559844 FCER2P06734 321 aa15.41■□□□□ 0.06
SNX1-208ENST00000559844 HIST1H1DP16402 221 aaKnown RBP15.41■□□□□ 0.06
SNX1-208ENST00000559844 CXCL3P19876 107 aa15.41■□□□□ 0.06
SNX1-208ENST00000559844 TBPP20226 339 aa15.41■□□□□ 0.06
SNX1-208ENST00000559844 ACKR3P25106 362 aa15.41■□□□□ 0.06
SNX1-208ENST00000559844 SLC22A6Q4U2R8 563 aa15.41■□□□□ 0.06
SNX1-208ENST00000559844 CLVS2Q5SYC1 327 aa15.41■□□□□ 0.06
SNX1-208ENST00000559844 RTL6Q6ICC9 239 aa15.41■□□□□ 0.06
SNX1-208ENST00000559844 CRIP3Q6Q6R5 217 aa15.41■□□□□ 0.06
SNX1-208ENST00000559844 SLC36A1Q7Z2H8 476 aa15.41■□□□□ 0.06
SNX1-208ENST00000559844 P4HA3Q7Z4N8 544 aa15.41■□□□□ 0.06
SNX1-208ENST00000559844 DPPA2Q7Z7J5 298 aa15.41■□□□□ 0.06
SNX1-208ENST00000559844 FAM89BQ8N5H3 189 aa15.41■□□□□ 0.06
SNX1-208ENST00000559844 SPICQ8N5J4 248 aa15.41■□□□□ 0.06
SNX1-208ENST00000559844 CCDC107Q8WV48 283 aa15.41■□□□□ 0.06
SNX1-208ENST00000559844 PIGTQ969N2 578 aa15.41■□□□□ 0.06
SNX1-208ENST00000559844 C1QTNF5Q9BXJ0 243 aa15.41■□□□□ 0.06
SNX1-208ENST00000559844 TINAGL1Q9GZM7 467 aaPredicted RBP15.41■□□□□ 0.06
SNX1-208ENST00000559844 ALX4Q9H161 411 aaPredicted RBP15.41■□□□□ 0.06
SNX1-208ENST00000559844 GPR173Q9NS66 373 aa15.41■□□□□ 0.06
SNX1-208ENST00000559844 ZNF69Q9UC07 566 aa15.41■□□□□ 0.06
SNX1-208ENST00000559844 NPTNQ9Y639 398 aa15.41■□□□□ 0.06
SNX1-208ENST00000559844 ZNF462Q96JM2 2506 aa15.41■□□□□ 0.06
SNX1-208ENST00000559844 A0A0A6YYD4 124 aa15.4■□□□□ 0.06
SNX1-208ENST00000559844 MPZP25189 248 aa15.4■□□□□ 0.06
SNX1-208ENST00000559844 ARR3P36575 388 aa15.4■□□□□ 0.06
SNX1-208ENST00000559844 ARL6IP1Q15041 203 aa15.4■□□□□ 0.06
SNX1-208ENST00000559844 RNASE10Q5GAN6 216 aaKnown RBP15.4■□□□□ 0.06
SNX1-208ENST00000559844 ZBTB37Q5TC79 503 aa15.4■□□□□ 0.06
SNX1-208ENST00000559844 NSUN5P2Q63ZY6 315 aa15.4■□□□□ 0.06
SNX1-208ENST00000559844 BPIFB2Q8N4F0 458 aa15.4■□□□□ 0.06
SNX1-208ENST00000559844 RPRMLQ8N4K4 120 aa15.4■□□□□ 0.06
SNX1-208ENST00000559844 ASCC1Q8N9N2 400 aaKnown RBP15.4■□□□□ 0.06
SNX1-208ENST00000559844 OR51T1Q8NGJ9 327 aa15.4■□□□□ 0.06
SNX1-208ENST00000559844 MS4A3Q96HJ5 214 aa15.4■□□□□ 0.06
SNX1-208ENST00000559844 TECTBQ96PL2 329 aa15.4■□□□□ 0.06
SNX1-208ENST00000559844 PRRT1Q99946 306 aa15.4■□□□□ 0.06
SNX1-208ENST00000559844 TMEM246Q9BRR3 403 aa15.4■□□□□ 0.06
SNX1-208ENST00000559844 ZNF436Q9C0F3 470 aaPredicted RBP15.4■□□□□ 0.06
SNX1-208ENST00000559844 PLEKHA6Q9Y2H5 1048 aa15.4■□□□□ 0.06
SNX1-208ENST00000559844 hCG_38984A0A1B0GV85 526 aa15.4■□□□□ 0.06
SNX1-208ENST00000559844 SMLR1H3BR10 107 aa15.4■□□□□ 0.06
SNX1-208ENST00000559844 M0QYG6 137 aa15.4■□□□□ 0.06
SNX1-208ENST00000559844 HOXD4P09016 255 aaPredicted RBP15.4■□□□□ 0.06
SNX1-208ENST00000559844 ZNF735P0CB33 412 aa15.4■□□□□ 0.06
SNX1-208ENST00000559844 UQCRFS1P47985 274 aa15.4■□□□□ 0.06
SNX1-208ENST00000559844 TMEM42Q69YG0 159 aa15.4■□□□□ 0.06
SNX1-208ENST00000559844 TMEM53Q6P2H8 277 aa15.4■□□□□ 0.06
SNX1-208ENST00000559844 SEZ6L2Q6UXD5 910 aa15.4■□□□□ 0.06
SNX1-208ENST00000559844 IDO2Q6ZQW0 420 aa15.4■□□□□ 0.06
SNX1-208ENST00000559844 LHFPL2Q6ZUX7 228 aa15.4■□□□□ 0.06
SNX1-208ENST00000559844 NUFIP2Q7Z417 695 aaKnown RBP15.4■□□□□ 0.06
SNX1-208ENST00000559844 CPEB3Q8NE35 698 aaKnown RBP15.4■□□□□ 0.06
SNX1-208ENST00000559844 NUDCD2Q8WVJ2 157 aa15.4■□□□□ 0.06
SNX1-208ENST00000559844 SPSB4Q96A44 273 aa15.4■□□□□ 0.06
SNX1-208ENST00000559844 TM2D1Q9BX74 207 aa15.4■□□□□ 0.06
SNX1-208ENST00000559844 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.4■□□□□ 0.06
SNX1-208ENST00000559844 SLC2A8Q9NY64 477 aa15.4■□□□□ 0.06
SNX1-208ENST00000559844 INTS1Q8N201 2190 aaKnown RBP15.39■□□□□ 0.06
SNX1-208ENST00000559844 PCNX1Q96RV3 2341 aa15.39■□□□□ 0.05
SNX1-208ENST00000559844 SOCS1O15524 211 aa15.39■□□□□ 0.05
SNX1-208ENST00000559844 MGMTP16455 207 aa15.39■□□□□ 0.05
SNX1-208ENST00000559844 GNLYP22749 145 aa15.39■□□□□ 0.05
SNX1-208ENST00000559844 CBX5P45973 191 aa15.39■□□□□ 0.05
SNX1-208ENST00000559844 MTCP1P56278 107 aa15.39■□□□□ 0.05
SNX1-208ENST00000559844 FAM3AP98173 230 aa15.39■□□□□ 0.05
SNX1-208ENST00000559844 OR8B8Q15620 311 aa15.39■□□□□ 0.05
SNX1-208ENST00000559844 C9orf135Q5VTT2 229 aa15.39■□□□□ 0.05
SNX1-208ENST00000559844 COLCA1Q6ZS62 124 aa15.39■□□□□ 0.05
SNX1-208ENST00000559844 OR5D18Q8NGL1 313 aa15.39■□□□□ 0.05
SNX1-208ENST00000559844 WNT2BQ93097 391 aa15.39■□□□□ 0.05
SNX1-208ENST00000559844 GON7Q9BXV9 100 aa15.39■□□□□ 0.05
SNX1-208ENST00000559844 PLSCR3Q9NRY6 295 aa15.39■□□□□ 0.05
SNX1-208ENST00000559844 B3GNT2Q9NY97 397 aa15.39■□□□□ 0.05
SNX1-208ENST00000559844 A0A096LPE4 126 aa15.38■□□□□ 0.05
SNX1-208ENST00000559844 A0A1W2PPZ6 126 aa15.38■□□□□ 0.05
SNX1-208ENST00000559844 NRASP01111 189 aa15.38■□□□□ 0.05
SNX1-208ENST00000559844 VSIG10L2P0DP72 767 aa15.38■□□□□ 0.05
SNX1-208ENST00000559844 CPT2P23786 658 aa15.38■□□□□ 0.05
SNX1-208ENST00000559844 AGTR1P30556 359 aa15.38■□□□□ 0.05
SNX1-208ENST00000559844 CA7P43166 264 aa15.38■□□□□ 0.05
SNX1-208ENST00000559844 ZP1P60852 638 aa15.38■□□□□ 0.05
SNX1-208ENST00000559844 NDUFA5Q16718 116 aa15.38■□□□□ 0.05
SNX1-208ENST00000559844 SEM1Q6ZVN7 128 aa15.38■□□□□ 0.05
SNX1-208ENST00000559844 C9orf106Q8NAJ2 232 aa15.38■□□□□ 0.05
SNX1-208ENST00000559844 PRR7Q8TB68 274 aa15.38■□□□□ 0.05
SNX1-208ENST00000559844 BORCS8Q96FH0 119 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms