RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 PRODHO43272 600 aa10.64□□□□□ -0.71
TPM1-220ENST00000559556 CHST1O43916 411 aa10.64□□□□□ -0.71
TPM1-220ENST00000559556 FAM107AO95990 144 aa10.64□□□□□ -0.71
TPM1-220ENST00000559556 POU1F1P28069 291 aa10.64□□□□□ -0.71
TPM1-220ENST00000559556 MAP2K3P46734 347 aa10.64□□□□□ -0.71
TPM1-220ENST00000559556 CBX1P83916 185 aa10.64□□□□□ -0.71
TPM1-220ENST00000559556 GK3PQ14409 553 aa10.64□□□□□ -0.71
TPM1-220ENST00000559556 CEACAM21Q3KPI0 293 aa10.64□□□□□ -0.71
TPM1-220ENST00000559556 LIAT1Q6ZQX7 453 aa10.64□□□□□ -0.71
TPM1-220ENST00000559556 OR10G2Q8NGC3 310 aa10.64□□□□□ -0.71
TPM1-220ENST00000559556 THEM6Q8WUY1 208 aa10.64□□□□□ -0.71
TPM1-220ENST00000559556 ITFG2Q969R8 447 aa10.64□□□□□ -0.71
TPM1-220ENST00000559556 FEVQ99581 238 aa10.64□□□□□ -0.71
TPM1-220ENST00000559556 OR51V1Q9H2C8 321 aa10.64□□□□□ -0.71
TPM1-220ENST00000559556 KLHDC2Q9Y2U9 406 aa10.64□□□□□ -0.71
TPM1-220ENST00000559556 ZNF732B4DXR9 585 aa10.63□□□□□ -0.71
TPM1-220ENST00000559556 PRR23D1E9PI22 279 aaPredicted RBP10.63□□□□□ -0.71
TPM1-220ENST00000559556 H3BN98 237 aa10.63□□□□□ -0.71
TPM1-220ENST00000559556 PRR23D2P0DMB1 279 aaPredicted RBP10.63□□□□□ -0.71
TPM1-220ENST00000559556 FAM98BQ52LJ0 330 aaKnown RBP10.63□□□□□ -0.71
TPM1-220ENST00000559556 HIST2H2BDQ6DRA6 164 aa10.63□□□□□ -0.71
TPM1-220ENST00000559556 PLBD1Q6P4A8 553 aa10.63□□□□□ -0.71
TPM1-220ENST00000559556 Q6ZPA2 131 aa10.63□□□□□ -0.71
TPM1-220ENST00000559556 TRPM8Q7Z2W7 1104 aa10.63□□□□□ -0.71
TPM1-220ENST00000559556 REC114Q7Z4M0 266 aa10.63□□□□□ -0.71
TPM1-220ENST00000559556 MKXQ8IYA7 352 aa10.63□□□□□ -0.71
TPM1-220ENST00000559556 FAM185AQ8N0U4 392 aa10.63□□□□□ -0.71
TPM1-220ENST00000559556 ARHGAP24Q8N264 748 aa10.63□□□□□ -0.71
TPM1-220ENST00000559556 FAM81AQ8TBF8 368 aa10.63□□□□□ -0.71
TPM1-220ENST00000559556 AQP3Q92482 292 aa10.63□□□□□ -0.71
TPM1-220ENST00000559556 CLPTM1LQ96KA5 538 aa10.63□□□□□ -0.71
TPM1-220ENST00000559556 HIST1H2AAQ96QV6 131 aa10.63□□□□□ -0.71
TPM1-220ENST00000559556 C19orf12Q9NSK7 152 aa10.63□□□□□ -0.71
TPM1-220ENST00000559556 RASL12Q9NYN1 266 aa10.63□□□□□ -0.71
TPM1-220ENST00000559556 ACOD1A6NK06 481 aa10.62□□□□□ -0.71
TPM1-220ENST00000559556 MTRF1O75570 445 aaKnown RBP10.62□□□□□ -0.71
TPM1-220ENST00000559556 IGLV3-1P01715 115 aa10.62□□□□□ -0.71
TPM1-220ENST00000559556 ATP6V1B1P15313 513 aa10.62□□□□□ -0.71
TPM1-220ENST00000559556 SLC2A5P22732 501 aa10.62□□□□□ -0.71
TPM1-220ENST00000559556 PAX6P26367 422 aa10.62□□□□□ -0.71
TPM1-220ENST00000559556 RPL31P62899 125 aaKnown RBP10.62□□□□□ -0.71
TPM1-220ENST00000559556 SMIM21Q3B7S5 101 aa10.62□□□□□ -0.71
TPM1-220ENST00000559556 CEP78Q5JTW2 689 aa10.62□□□□□ -0.71
TPM1-220ENST00000559556 SLC35D3Q5M8T2 416 aa10.62□□□□□ -0.71
TPM1-220ENST00000559556 ZBTB37Q5TC79 503 aa10.62□□□□□ -0.71
TPM1-220ENST00000559556 ACP7Q6ZNF0 438 aa10.62□□□□□ -0.71
TPM1-220ENST00000559556 THAP5Q7Z6K1 395 aa10.62□□□□□ -0.71
TPM1-220ENST00000559556 DHFR2Q86XF0 187 aa10.62□□□□□ -0.71
TPM1-220ENST00000559556 C11orf42Q8N5U0 333 aa10.62□□□□□ -0.71
TPM1-220ENST00000559556 C11orf44Q8N8P7 122 aa10.62□□□□□ -0.71
TPM1-220ENST00000559556 DTX3Q8N9I9 347 aa10.62□□□□□ -0.71
TPM1-220ENST00000559556 OR5A2Q8NGI9 324 aa10.62□□□□□ -0.71
TPM1-220ENST00000559556 ZNF671Q8TAW3 534 aa10.62□□□□□ -0.71
TPM1-220ENST00000559556 PIFOQ8TCI5 191 aa10.62□□□□□ -0.71
TPM1-220ENST00000559556 GIPC3Q8TF64 312 aa10.62□□□□□ -0.71
TPM1-220ENST00000559556 PPP1R14AQ96A00 147 aa10.62□□□□□ -0.71
TPM1-220ENST00000559556 NPFFR1Q9GZQ6 430 aa10.62□□□□□ -0.71
TPM1-220ENST00000559556 YY1AP1Q9H869 796 aa10.62□□□□□ -0.71
TPM1-220ENST00000559556 HEXA-AS1Q9H8Q6 139 aa10.62□□□□□ -0.71
TPM1-220ENST00000559556 FAM206AQ9NX38 181 aa10.62□□□□□ -0.71
TPM1-220ENST00000559556 A0A1W2PPH5 198 aa10.61□□□□□ -0.71
TPM1-220ENST00000559556 VGLL3A8MV65 326 aa10.61□□□□□ -0.71
TPM1-220ENST00000559556 PIN1P1O15428 100 aa10.61□□□□□ -0.71
TPM1-220ENST00000559556 DCTN3O75935 186 aa10.61□□□□□ -0.71
TPM1-220ENST00000559556 PGA5P0DJD9 388 aa10.61□□□□□ -0.71
TPM1-220ENST00000559556 RAP2AP10114 183 aa10.61□□□□□ -0.71
TPM1-220ENST00000559556 ALOX5APP20292 161 aa10.61□□□□□ -0.71
TPM1-220ENST00000559556 BMXP51813 675 aa10.61□□□□□ -0.71
TPM1-220ENST00000559556 MNAT1P51948 309 aa10.61□□□□□ -0.71
TPM1-220ENST00000559556 CAPZA1P52907 286 aa10.61□□□□□ -0.71
TPM1-220ENST00000559556 GABPB1Q06547 395 aaPredicted RBP10.61□□□□□ -0.71
TPM1-220ENST00000559556 TRIM25Q14258 630 aaKnown RBP10.61□□□□□ -0.71
TPM1-220ENST00000559556 FAM189A2Q15884 450 aa10.61□□□□□ -0.71
TPM1-220ENST00000559556 HAGHLQ6PII5 290 aaPredicted RBP10.61□□□□□ -0.71
TPM1-220ENST00000559556 DEGS2Q6QHC5 323 aa10.61□□□□□ -0.71
TPM1-220ENST00000559556 KRT77Q7Z794 578 aa10.61□□□□□ -0.71
TPM1-220ENST00000559556 CPOQ8IVL8 374 aa10.61□□□□□ -0.71
TPM1-220ENST00000559556 ZNF561Q8N587 486 aa10.61□□□□□ -0.71
TPM1-220ENST00000559556 POC1AQ8NBT0 407 aa10.61□□□□□ -0.71
TPM1-220ENST00000559556 BCAS4Q8TDM0 211 aa10.61□□□□□ -0.71
TPM1-220ENST00000559556 ZNF702PQ9H963 129 aa10.61□□□□□ -0.71
TPM1-220ENST00000559556 SERTAD4Q9NUC0 356 aa10.61□□□□□ -0.71
TPM1-220ENST00000559556 TAS2R1Q9NYW7 299 aa10.61□□□□□ -0.71
TPM1-220ENST00000559556 USE1Q9NZ43 259 aa10.61□□□□□ -0.71
TPM1-220ENST00000559556 LAMP5Q9UJQ1 280 aa10.61□□□□□ -0.71
TPM1-220ENST00000559556 ARL2BPQ9Y2Y0 163 aa10.61□□□□□ -0.71
TPM1-220ENST00000559556 hCG_1809904A0A1W2PP81 198 aa10.6□□□□□ -0.71
TPM1-220ENST00000559556 A0A1W2PPE2 198 aa10.6□□□□□ -0.71
TPM1-220ENST00000559556 A0A1W2PR64 198 aa10.6□□□□□ -0.71
TPM1-220ENST00000559556 A0A1W2PRV1 198 aa10.6□□□□□ -0.71
TPM1-220ENST00000559556 FAM90A8PA6NJQ4 464 aa10.6□□□□□ -0.71
TPM1-220ENST00000559556 RFPL4AA6NLU0 287 aa10.6□□□□□ -0.71
TPM1-220ENST00000559556 RFPL4AL1F8VTS6 287 aa10.6□□□□□ -0.71
TPM1-220ENST00000559556 SLC1A7O00341 560 aa10.6□□□□□ -0.71
TPM1-220ENST00000559556 PRB2P02812 416 aaPredicted RBP10.6□□□□□ -0.71
TPM1-220ENST00000559556 VSIG10L2P0DP72 767 aa10.6□□□□□ -0.71
TPM1-220ENST00000559556 FAHP16930 419 aa10.6□□□□□ -0.71
TPM1-220ENST00000559556 CDK5Q00535 292 aa10.6□□□□□ -0.71
TPM1-220ENST00000559556 MS4A2Q01362 244 aa10.6□□□□□ -0.71
TPM1-220ENST00000559556 GINS1Q14691 196 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms